RNA–Protein interactions for RNA: ENST00000426248.7

PKP4-205, Transcript of plakophilin 4, humanhuman

TSL 1 (best)

Gene PKP4, Length 4,134 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-205ENST00000426248 KRTAP4-7Q9BYR0 210 aa5.59□□□□□ -1.51
PKP4-205ENST00000426248 SYNE2Q8WXH0 6885 aaKnown RBP5.54□□□□□ -1.52
PKP4-205ENST00000426248 MACF1Q9UPN3 7388 aaKnown RBP5.49□□□□□ -1.53
PKP4-205ENST00000426248 KRTAP9-6A8MVA2 160 aa5.48□□□□□ -1.53
PKP4-205ENST00000426248 KRTAP19-7Q3SYF9 63 aa5.48□□□□□ -1.53
PKP4-205ENST00000426248 MT1EP04732 61 aa5.46□□□□□ -1.54
PKP4-205ENST00000426248 KRTAP9-6A0A140TA67 174 aa5.42□□□□□ -1.54
PKP4-205ENST00000426248 MUC12Q9UKN1 5478 aa5.41□□□□□ -1.54
PKP4-205ENST00000426248 KRTAP12-4P60329 112 aa5.4□□□□□ -1.55
PKP4-205ENST00000426248 MT1LQ93083 61 aa5.38□□□□□ -1.55
PKP4-205ENST00000426248 SPRR2EP22531 72 aa5.36□□□□□ -1.55
PKP4-205ENST00000426248 SPRR2BP35325 72 aa5.36□□□□□ -1.55
PKP4-205ENST00000426248 SPRR2AP35326 72 aa5.36□□□□□ -1.55
PKP4-205ENST00000426248 MT1GP13640 62 aa5.36□□□□□ -1.55
PKP4-205ENST00000426248 KRTAP2-3P0C7H8 128 aa5.35□□□□□ -1.55
PKP4-205ENST00000426248 KRTAP2-4Q9BYR9 128 aa5.35□□□□□ -1.55
PKP4-205ENST00000426248 KRTAP2-1Q9BYU5 128 aa5.35□□□□□ -1.55
PKP4-205ENST00000426248 KRTAP19-3Q7Z4W3 81 aa5.31□□□□□ -1.56
PKP4-205ENST00000426248 LCE3BQ5TA77 95 aa5.29□□□□□ -1.56
PKP4-205ENST00000426248 KRTAP4-3Q9BYR4 195 aa5.26□□□□□ -1.57
PKP4-205ENST00000426248 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.21□□□□□ -1.58
PKP4-205ENST00000426248 MT1MQ8N339 61 aa5.18□□□□□ -1.58
PKP4-205ENST00000426248 LOC100996750A0A140TA64 210 aa5.18□□□□□ -1.58
PKP4-205ENST00000426248 KRTAP19-4Q3LI73 84 aa5.16□□□□□ -1.58
PKP4-205ENST00000426248 SPRR2DP22532 72 aa5.15□□□□□ -1.59
PKP4-205ENST00000426248 KRTAP9-7A8MTY7 169 aa5.05□□□□□ -1.6
PKP4-205ENST00000426248 MDN1Q9NU22 5596 aa5.04□□□□□ -1.6
PKP4-205ENST00000426248 LCE1AQ5T7P2 110 aa5.04□□□□□ -1.6
PKP4-205ENST00000426248 KRTAP6-3Q3LI67 103 aa5.01□□□□□ -1.61
PKP4-205ENST00000426248 LCE5AQ5TCM9 118 aa5.01□□□□□ -1.61
PKP4-205ENST00000426248 KRTAP5-9P26371 169 aa4.92□□□□□ -1.62
PKP4-205ENST00000426248 KRTAP4-9Q9BYQ8 210 aa4.92□□□□□ -1.62
PKP4-205ENST00000426248 PRM1P04553 51 aa4.86□□□□□ -1.63
PKP4-205ENST00000426248 MUC19Q7Z5P9 8384 aa4.85□□□□□ -1.63
PKP4-205ENST00000426248 LCE3DQ9BYE3 92 aa4.73□□□□□ -1.65
PKP4-205ENST00000426248 LCE3EQ5T5B0 92 aa4.68□□□□□ -1.66
PKP4-205ENST00000426248 MT4P47944 62 aa4.63□□□□□ -1.67
PKP4-205ENST00000426248 NEBP20929 6669 aa4.59□□□□□ -1.67
PKP4-205ENST00000426248 KRTAP6-1Q3LI64 71 aa4.59□□□□□ -1.67
PKP4-205ENST00000426248 MT1AP04731 61 aa4.57□□□□□ -1.68
PKP4-205ENST00000426248 KRTAP20-1Q3LI63 56 aa4.53□□□□□ -1.69
PKP4-205ENST00000426248 KRTAP2-2Q9BYT5 123 aa4.44□□□□□ -1.7
PKP4-205ENST00000426248 KRTAP6-2Q3LI66 62 aa4.39□□□□□ -1.71
PKP4-205ENST00000426248 KRTAP5-5Q701N2 237 aaPredicted RBP4.36□□□□□ -1.71
PKP4-205ENST00000426248 MT3P25713 68 aa4.33□□□□□ -1.72
PKP4-205ENST00000426248 KRTAP9-4Q9BYQ2 154 aa4.31□□□□□ -1.72
PKP4-205ENST00000426248 LCE1BQ5T7P3 118 aa4.3□□□□□ -1.72
PKP4-205ENST00000426248 LCE1DQ5T752 114 aa4.29□□□□□ -1.72
PKP4-205ENST00000426248 LCE1EQ5T753 118 aa4.28□□□□□ -1.72
PKP4-205ENST00000426248 KRTAP4-6Q9BYQ5 205 aa4.27□□□□□ -1.73
PKP4-205ENST00000426248 LCE4AQ5TA78 99 aa4.26□□□□□ -1.73
PKP4-205ENST00000426248 KRTAP20-2Q3LI61 65 aa4.06□□□□□ -1.76
PKP4-205ENST00000426248 KRTAP5-4Q6L8H1 288 aa4.03□□□□□ -1.76
PKP4-205ENST00000426248 HMCN1Q96RW7 5635 aa3.99□□□□□ -1.77
PKP4-205ENST00000426248 MUC5ACP98088 5654 aa3.85□□□□□ -1.79
PKP4-205ENST00000426248 KRTAP4-11Q9BYQ6 195 aa3.68□□□□□ -1.82
PKP4-205ENST00000426248 GPR98Q8WXG9 6306 aa3.67□□□□□ -1.82
PKP4-205ENST00000426248 KRTAP5-3Q6L8H2 238 aa3.65□□□□□ -1.82
PKP4-205ENST00000426248 KRTAP5-2Q701N4 177 aa3.62□□□□□ -1.83
PKP4-205ENST00000426248 LCE1FQ5T754 118 aa3.48□□□□□ -1.85
PKP4-205ENST00000426248 KRTAP4-4Q9BYR3 166 aa3.46□□□□□ -1.86
PKP4-205ENST00000426248 AHNAK2Q8IVF2 5795 aa3.39□□□□□ -1.87
PKP4-205ENST00000426248 LCE1CQ5T751 118 aa3.38□□□□□ -1.87
PKP4-205ENST00000426248 KRTAP4-12Q9BQ66 201 aa3.32□□□□□ -1.88
PKP4-205ENST00000426248 KRTAP4-2Q9BYR5 136 aa3.32□□□□□ -1.88
PKP4-205ENST00000426248 KRTAP9-9Q9BYP9 154 aa3.3□□□□□ -1.88
PKP4-205ENST00000426248 KRTAP5-8O75690 187 aa3.26□□□□□ -1.89
PKP4-205ENST00000426248 KRTAP5-1Q6L8H4 278 aa3.22□□□□□ -1.89
PKP4-205ENST00000426248 KRTAP5-10Q6L8G5 202 aa3.13□□□□□ -1.91
PKP4-205ENST00000426248 MUC5BQ9HC84 5762 aaPredicted RBP3.09□□□□□ -1.92
PKP4-205ENST00000426248 KRTAP5-7Q6L8G8 165 aa2.85□□□□□ -1.95
PKP4-205ENST00000426248 KRTAP21-2Q3LI59 83 aa2.8□□□□□ -1.96
PKP4-205ENST00000426248 KRTAP5-11Q6L8G4 156 aa2.75□□□□□ -1.97
PKP4-205ENST00000426248 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.75□□□□□ -1.97
PKP4-205ENST00000426248 KRTAP21-1Q3LI58 79 aa2.74□□□□□ -1.97
PKP4-205ENST00000426248 AHNAKQ09666 5890 aaKnown RBP2.68□□□□□ -1.98
PKP4-205ENST00000426248 PHGR1C9JFL3 82 aa2.38□□□□□ -2.03
PKP4-205ENST00000426248 MUC16Q8WXI7 14507 aa1.51□□□□□ -2.17
Retrieved 78 of 20,778 RNA–protein pairs in 13.9 ms