RNA–Protein interactions for RNA: ENST00000425703.5

MSH5-207, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 694 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-207ENST00000425703 MT1MQ8N339 61 aa6.53□□□□□ -1.36
MSH5-207ENST00000425703 Q1T7F1 81 aa6.49□□□□□ -1.37
MSH5-207ENST00000425703 K7ERS5 55 aa6.45□□□□□ -1.38
MSH5-207ENST00000425703 PSPHP1O15172 72 aa6.44□□□□□ -1.38
MSH5-207ENST00000425703 KRTAP12-3P60328 96 aa6.43□□□□□ -1.38
MSH5-207ENST00000425703 KRTAP25-1Q3LHN0 102 aa6.42□□□□□ -1.38
MSH5-207ENST00000425703 KRTAP4-9Q9BYQ8 210 aa6.36□□□□□ -1.39
MSH5-207ENST00000425703 LCE4AQ5TA78 99 aa6.32□□□□□ -1.4
MSH5-207ENST00000425703 KRTAP4-3Q9BYR4 195 aa6.32□□□□□ -1.4
MSH5-207ENST00000425703 LCE1DQ5T752 114 aa6.25□□□□□ -1.41
MSH5-207ENST00000425703 A6NED7 52 aa6.24□□□□□ -1.41
MSH5-207ENST00000425703 KRTAP23-1A1A580 65 aa6.23□□□□□ -1.41
MSH5-207ENST00000425703 RPS28P62857 69 aaKnown RBP6.22□□□□□ -1.41
MSH5-207ENST00000425703 KRTAP5-4Q6L8H1 288 aa6.22□□□□□ -1.41
MSH5-207ENST00000425703 KRTAP4-7Q9BYR0 210 aa6.21□□□□□ -1.42
MSH5-207ENST00000425703 KRTAP19-4Q3LI73 84 aa6.18□□□□□ -1.42
MSH5-207ENST00000425703 MT4P47944 62 aa6.17□□□□□ -1.42
MSH5-207ENST00000425703 HMCN1Q96RW7 5635 aa6.17□□□□□ -1.42
MSH5-207ENST00000425703 PCP4P48539 62 aa6.11□□□□□ -1.43
MSH5-207ENST00000425703 CDC42SE1Q9NRR8 79 aa6.11□□□□□ -1.43
MSH5-207ENST00000425703 GPR98Q8WXG9 6306 aa6.07□□□□□ -1.44
MSH5-207ENST00000425703 KRTAP15-1Q3LI76 137 aa6.03□□□□□ -1.44
MSH5-207ENST00000425703 KRTAP4-6Q9BYQ5 205 aa6.02□□□□□ -1.45
MSH5-207ENST00000425703 ROMO1P60602 79 aa6.01□□□□□ -1.45
MSH5-207ENST00000425703 KRTAP5-5Q701N2 237 aaPredicted RBP6.01□□□□□ -1.45
MSH5-207ENST00000425703 LCE3CQ5T5A8 94 aa5.93□□□□□ -1.46
MSH5-207ENST00000425703 LOC100996750A0A140TA64 210 aa5.88□□□□□ -1.47
MSH5-207ENST00000425703 SPRR5A0A1B0GTR4 108 aa5.87□□□□□ -1.47
MSH5-207ENST00000425703 AHNAK2Q8IVF2 5795 aa5.86□□□□□ -1.47
MSH5-207ENST00000425703 KRTAP12-4P60329 112 aa5.84□□□□□ -1.47
MSH5-207ENST00000425703 KRTAP20-2Q3LI61 65 aa5.84□□□□□ -1.47
MSH5-207ENST00000425703 KRTAP5-10Q6L8G5 202 aa5.79□□□□□ -1.48
MSH5-207ENST00000425703 KRTAP5-3Q6L8H2 238 aa5.68□□□□□ -1.5
MSH5-207ENST00000425703 SYNE1Q8NF91 8797 aaKnown RBP5.66□□□□□ -1.5
MSH5-207ENST00000425703 MT1AP04731 61 aa5.61□□□□□ -1.51
MSH5-207ENST00000425703 KRTAP5-7Q6L8G8 165 aa5.57□□□□□ -1.52
MSH5-207ENST00000425703 KRTAP9-6A8MVA2 160 aa5.56□□□□□ -1.52
MSH5-207ENST00000425703 KRTAP6-1Q3LI64 71 aa5.54□□□□□ -1.52
MSH5-207ENST00000425703 KRTAP5-2Q701N4 177 aa5.46□□□□□ -1.54
MSH5-207ENST00000425703 KRTAP9-4Q9BYQ2 154 aa5.41□□□□□ -1.54
MSH5-207ENST00000425703 BRK1Q8WUW1 75 aa5.4□□□□□ -1.54
MSH5-207ENST00000425703 KRTAP4-11Q9BYQ6 195 aa5.32□□□□□ -1.56
MSH5-207ENST00000425703 KRTAP6-2Q3LI66 62 aa5.29□□□□□ -1.56
MSH5-207ENST00000425703 MT3P25713 68 aa5.15□□□□□ -1.59
MSH5-207ENST00000425703 KRTAP5-8O75690 187 aa5.14□□□□□ -1.59
MSH5-207ENST00000425703 PMAIP1Q13794 54 aa5.1□□□□□ -1.59
MSH5-207ENST00000425703 OBSCNQ5VST9 7968 aa4.96□□□□□ -1.61
MSH5-207ENST00000425703 MUC5BQ9HC84 5762 aaPredicted RBP4.87□□□□□ -1.63
MSH5-207ENST00000425703 KRTAP5-1Q6L8H4 278 aa4.87□□□□□ -1.63
MSH5-207ENST00000425703 KRTAP9-9Q9BYP9 154 aa4.86□□□□□ -1.63
MSH5-207ENST00000425703 PRAC1Q96KF2 57 aa4.85□□□□□ -1.63
MSH5-207ENST00000425703 MUC5ACP98088 5654 aa4.82□□□□□ -1.64
MSH5-207ENST00000425703 AHNAKQ09666 5890 aaKnown RBP4.81□□□□□ -1.64
MSH5-207ENST00000425703 PRO0628Q9UI54 55 aa4.75□□□□□ -1.65
MSH5-207ENST00000425703 LCE1EQ5T753 118 aa4.74□□□□□ -1.65
MSH5-207ENST00000425703 KTN1-AS1Q86SY8 53 aa4.54□□□□□ -1.68
MSH5-207ENST00000425703 KRTAP4-2Q9BYR5 136 aa4.42□□□□□ -1.7
MSH5-207ENST00000425703 LCE1CQ5T751 118 aa4.39□□□□□ -1.71
MSH5-207ENST00000425703 LCE1BQ5T7P3 118 aa4.39□□□□□ -1.71
MSH5-207ENST00000425703 SVIPQ8NHG7 77 aa4.31□□□□□ -1.72
MSH5-207ENST00000425703 LCE3DQ9BYE3 92 aa4.29□□□□□ -1.72
MSH5-207ENST00000425703 LUZP6Q538Z0 58 aa4.16□□□□□ -1.74
MSH5-207ENST00000425703 LCE3EQ5T5B0 92 aa4.04□□□□□ -1.76
MSH5-207ENST00000425703 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.02□□□□□ -1.77
MSH5-207ENST00000425703 KRTAP5-11Q6L8G4 156 aa3.96□□□□□ -1.78
MSH5-207ENST00000425703 KRTAP4-12Q9BQ66 201 aa3.92□□□□□ -1.78
MSH5-207ENST00000425703 H3BS24 57 aa3.89□□□□□ -1.79
MSH5-207ENST00000425703 LCE1FQ5T754 118 aa3.86□□□□□ -1.79
MSH5-207ENST00000425703 KRTAP21-2Q3LI59 83 aa3.68□□□□□ -1.82
MSH5-207ENST00000425703 PHGR1C9JFL3 82 aa3.41□□□□□ -1.86
MSH5-207ENST00000425703 NDUFAF8A1L188 74 aa3.3□□□□□ -1.88
MSH5-207ENST00000425703 KRTAP4-4Q9BYR3 166 aa3.29□□□□□ -1.88
MSH5-207ENST00000425703 MUC19Q7Z5P9 8384 aa3.05□□□□□ -1.92
MSH5-207ENST00000425703 PRM1P04553 51 aa3.04□□□□□ -1.92
MSH5-207ENST00000425703 A0A0A0MQY5 61 aa2.86□□□□□ -1.95
MSH5-207ENST00000425703 INE1O15225 51 aa2.71□□□□□ -1.98
MSH5-207ENST00000425703 KRTAP21-1Q3LI58 79 aa2.58□□□□□ -2
MSH5-207ENST00000425703 MUC16Q8WXI7 14507 aa2.23□□□□□ -2.05
Retrieved 78 of 20,778 RNA–protein pairs in 10.1 ms