RNA–Protein interactions for RNA: ENST00000424846.3

TPM3P9-201, Transcript of tropomyosin 3 pseudogene 9, humanhuman

TSL 1 (best) BASIC

Gene TPM3P9, Length 2,920 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P9-201ENST00000424846 KRTAP4-3Q9BYR4 195 aa4.75□□□□□ -1.65
TPM3P9-201ENST00000424846 LOC100996750A0A140TA64 210 aa4.75□□□□□ -1.65
TPM3P9-201ENST00000424846 LCE2DQ5TA82 110 aaPredicted RBP4.63□□□□□ -1.67
TPM3P9-201ENST00000424846 MT1GP13640 62 aa4.63□□□□□ -1.67
TPM3P9-201ENST00000424846 DSTQ03001 7570 aaKnown RBP4.62□□□□□ -1.67
TPM3P9-201ENST00000424846 KRTAP19-6Q3LI70 58 aa4.6□□□□□ -1.67
TPM3P9-201ENST00000424846 KRTAP19-4Q3LI73 84 aa4.59□□□□□ -1.67
TPM3P9-201ENST00000424846 CRCT1Q9UGL9 99 aa4.58□□□□□ -1.68
TPM3P9-201ENST00000424846 MT1MQ8N339 61 aa4.53□□□□□ -1.68
TPM3P9-201ENST00000424846 KRTAP19-3Q7Z4W3 81 aa4.48□□□□□ -1.69
TPM3P9-201ENST00000424846 KRTAP12-4P60329 112 aa4.38□□□□□ -1.71
TPM3P9-201ENST00000424846 KRTAP4-9Q9BYQ8 210 aa4.33□□□□□ -1.72
TPM3P9-201ENST00000424846 SYNE1Q8NF91 8797 aaKnown RBP4.33□□□□□ -1.72
TPM3P9-201ENST00000424846 LCE5AQ5TCM9 118 aa4.32□□□□□ -1.72
TPM3P9-201ENST00000424846 MACF1Q9UPN3 7388 aaKnown RBP4.32□□□□□ -1.72
TPM3P9-201ENST00000424846 LCE3BQ5TA77 95 aa4.32□□□□□ -1.72
TPM3P9-201ENST00000424846 SPRR2FQ96RM1 72 aa4.32□□□□□ -1.72
TPM3P9-201ENST00000424846 MDN1Q9NU22 5596 aa4.27□□□□□ -1.73
TPM3P9-201ENST00000424846 SYNE2Q8WXH0 6885 aaKnown RBP4.21□□□□□ -1.73
TPM3P9-201ENST00000424846 KRTAP6-1Q3LI64 71 aa4.19□□□□□ -1.74
TPM3P9-201ENST00000424846 KRTAP9-2Q9BYQ4 174 aa4.08□□□□□ -1.76
TPM3P9-201ENST00000424846 MT1AP04731 61 aa4.05□□□□□ -1.76
TPM3P9-201ENST00000424846 OBSCNQ5VST9 7968 aa4.03□□□□□ -1.76
TPM3P9-201ENST00000424846 KRTAP9-7A8MTY7 169 aa4.02□□□□□ -1.77
TPM3P9-201ENST00000424846 LCE3DQ9BYE3 92 aa4.01□□□□□ -1.77
TPM3P9-201ENST00000424846 KRTAP5-5Q701N2 237 aaPredicted RBP3.99□□□□□ -1.77
TPM3P9-201ENST00000424846 LCE1AQ5T7P2 110 aa3.99□□□□□ -1.77
TPM3P9-201ENST00000424846 LCE3EQ5T5B0 92 aa3.95□□□□□ -1.78
TPM3P9-201ENST00000424846 PRM1P04553 51 aa3.91□□□□□ -1.78
TPM3P9-201ENST00000424846 KRTAP5-9P26371 169 aa3.86□□□□□ -1.79
TPM3P9-201ENST00000424846 SPRR2EP22531 72 aa3.85□□□□□ -1.79
TPM3P9-201ENST00000424846 SPRR2BP35325 72 aa3.85□□□□□ -1.79
TPM3P9-201ENST00000424846 SPRR2AP35326 72 aa3.85□□□□□ -1.79
TPM3P9-201ENST00000424846 KRTAP9-4Q9BYQ2 154 aa3.8□□□□□ -1.8
TPM3P9-201ENST00000424846 KRTAP6-2Q3LI66 62 aa3.77□□□□□ -1.81
TPM3P9-201ENST00000424846 SPRR2DP22532 72 aa3.66□□□□□ -1.82
TPM3P9-201ENST00000424846 MT3P25713 68 aa3.6□□□□□ -1.83
TPM3P9-201ENST00000424846 KRTAP6-3Q3LI67 103 aa3.57□□□□□ -1.84
TPM3P9-201ENST00000424846 KRTAP9-6A0A140TA67 174 aa3.47□□□□□ -1.85
TPM3P9-201ENST00000424846 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.42□□□□□ -1.86
TPM3P9-201ENST00000424846 KRTAP2-2Q9BYT5 123 aa3.42□□□□□ -1.86
TPM3P9-201ENST00000424846 KRTAP4-6Q9BYQ5 205 aa3.4□□□□□ -1.87
TPM3P9-201ENST00000424846 KRTAP5-4Q6L8H1 288 aa3.39□□□□□ -1.87
TPM3P9-201ENST00000424846 MT4P47944 62 aa3.33□□□□□ -1.88
TPM3P9-201ENST00000424846 NEBP20929 6669 aa3.27□□□□□ -1.89
TPM3P9-201ENST00000424846 HMCN1Q96RW7 5635 aa3.23□□□□□ -1.89
TPM3P9-201ENST00000424846 KRTAP20-2Q3LI61 65 aa3.23□□□□□ -1.89
TPM3P9-201ENST00000424846 MUC5ACP98088 5654 aa3.22□□□□□ -1.89
TPM3P9-201ENST00000424846 KRTAP5-2Q701N4 177 aa3.2□□□□□ -1.9
TPM3P9-201ENST00000424846 LCE1DQ5T752 114 aa3.09□□□□□ -1.91
TPM3P9-201ENST00000424846 LCE4AQ5TA78 99 aa3.06□□□□□ -1.92
TPM3P9-201ENST00000424846 KRTAP5-3Q6L8H2 238 aa3.06□□□□□ -1.92
TPM3P9-201ENST00000424846 LCE1BQ5T7P3 118 aa2.99□□□□□ -1.93
TPM3P9-201ENST00000424846 KRTAP4-11Q9BYQ6 195 aa2.99□□□□□ -1.93
TPM3P9-201ENST00000424846 KRTAP5-10Q6L8G5 202 aa2.95□□□□□ -1.94
TPM3P9-201ENST00000424846 KRTAP20-1Q3LI63 56 aa2.92□□□□□ -1.94
TPM3P9-201ENST00000424846 LCE1EQ5T753 118 aa2.86□□□□□ -1.95
TPM3P9-201ENST00000424846 KRTAP5-1Q6L8H4 278 aa2.86□□□□□ -1.95
TPM3P9-201ENST00000424846 KRTAP4-2Q9BYR5 136 aa2.83□□□□□ -1.96
TPM3P9-201ENST00000424846 LCE1CQ5T751 118 aa2.73□□□□□ -1.97
TPM3P9-201ENST00000424846 GPR98Q8WXG9 6306 aa2.7□□□□□ -1.98
TPM3P9-201ENST00000424846 KRTAP21-2Q3LI59 83 aa2.68□□□□□ -1.98
TPM3P9-201ENST00000424846 MUC19Q7Z5P9 8384 aa2.57□□□□□ -2
TPM3P9-201ENST00000424846 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.57□□□□□ -2
TPM3P9-201ENST00000424846 KRTAP4-4Q9BYR3 166 aa2.57□□□□□ -2
TPM3P9-201ENST00000424846 KRTAP5-8O75690 187 aa2.51□□□□□ -2.01
TPM3P9-201ENST00000424846 LCE1FQ5T754 118 aa2.51□□□□□ -2.01
TPM3P9-201ENST00000424846 KRTAP4-12Q9BQ66 201 aa2.51□□□□□ -2.01
TPM3P9-201ENST00000424846 KRTAP9-9Q9BYP9 154 aa2.5□□□□□ -2.01
TPM3P9-201ENST00000424846 AHNAK2Q8IVF2 5795 aa2.49□□□□□ -2.01
TPM3P9-201ENST00000424846 MUC5BQ9HC84 5762 aaPredicted RBP2.46□□□□□ -2.02
TPM3P9-201ENST00000424846 KRTAP21-1Q3LI58 79 aa2.42□□□□□ -2.02
TPM3P9-201ENST00000424846 KRTAP5-7Q6L8G8 165 aa2.41□□□□□ -2.02
TPM3P9-201ENST00000424846 KRTAP5-11Q6L8G4 156 aa2.33□□□□□ -2.04
TPM3P9-201ENST00000424846 AHNAKQ09666 5890 aaKnown RBP2.16□□□□□ -2.06
TPM3P9-201ENST00000424846 PHGR1C9JFL3 82 aa2.04□□□□□ -2.08
TPM3P9-201ENST00000424846 MUC16Q8WXI7 14507 aa1.38□□□□□ -2.19
Retrieved 77 of 20,778 RNA–protein pairs in 136.6 ms