RNA–Protein interactions for RNA: ENST00000424649.6

PXN-204, Transcript of paxillin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PXN, Length 3,683 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PXN-204ENST00000424649 KRTAP19-7Q3SYF9 63 aa4.25□□□□□ -1.73
PXN-204ENST00000424649 SSPOA2VEC9 5147 aa4.19□□□□□ -1.74
PXN-204ENST00000424649 MT1LQ93083 61 aa4.19□□□□□ -1.74
PXN-204ENST00000424649 SYNE2Q8WXH0 6885 aaKnown RBP4.18□□□□□ -1.74
PXN-204ENST00000424649 MT1EP04732 61 aa4.15□□□□□ -1.75
PXN-204ENST00000424649 KRTAP19-6Q3LI70 58 aa4.11□□□□□ -1.75
PXN-204ENST00000424649 KRTAP12-4P60329 112 aa4.08□□□□□ -1.76
PXN-204ENST00000424649 LCE3BQ5TA77 95 aa4.08□□□□□ -1.76
PXN-204ENST00000424649 SPRR2FQ96RM1 72 aa4.07□□□□□ -1.76
PXN-204ENST00000424649 LCE2DQ5TA82 110 aaPredicted RBP4.06□□□□□ -1.76
PXN-204ENST00000424649 KRTAP2-3P0C7H8 128 aa4.04□□□□□ -1.76
PXN-204ENST00000424649 KRTAP2-4Q9BYR9 128 aa4.04□□□□□ -1.76
PXN-204ENST00000424649 KRTAP2-1Q9BYU5 128 aa4.04□□□□□ -1.76
PXN-204ENST00000424649 KRTAP4-9Q9BYQ8 210 aa4.02□□□□□ -1.77
PXN-204ENST00000424649 MT1MQ8N339 61 aa3.91□□□□□ -1.78
PXN-204ENST00000424649 MACF1Q9UPN3 7388 aaKnown RBP3.9□□□□□ -1.79
PXN-204ENST00000424649 KRTAP19-3Q7Z4W3 81 aa3.9□□□□□ -1.79
PXN-204ENST00000424649 KRTAP19-4Q3LI73 84 aa3.83□□□□□ -1.8
PXN-204ENST00000424649 MDN1Q9NU22 5596 aa3.82□□□□□ -1.8
PXN-204ENST00000424649 KRTAP9-2Q9BYQ4 174 aa3.81□□□□□ -1.8
PXN-204ENST00000424649 LCE3DQ9BYE3 92 aa3.69□□□□□ -1.82
PXN-204ENST00000424649 KRTAP6-1Q3LI64 71 aa3.67□□□□□ -1.82
PXN-204ENST00000424649 KRTAP9-7A8MTY7 169 aa3.64□□□□□ -1.83
PXN-204ENST00000424649 PRM1P04553 51 aa3.64□□□□□ -1.83
PXN-204ENST00000424649 LCE5AQ5TCM9 118 aa3.62□□□□□ -1.83
PXN-204ENST00000424649 LCE3EQ5T5B0 92 aa3.61□□□□□ -1.83
PXN-204ENST00000424649 SPRR2EP22531 72 aa3.59□□□□□ -1.83
PXN-204ENST00000424649 SPRR2BP35325 72 aa3.59□□□□□ -1.83
PXN-204ENST00000424649 SPRR2AP35326 72 aa3.59□□□□□ -1.83
PXN-204ENST00000424649 KRTAP5-9P26371 169 aa3.55□□□□□ -1.84
PXN-204ENST00000424649 LCE1AQ5T7P2 110 aa3.5□□□□□ -1.85
PXN-204ENST00000424649 KRTAP9-6A0A140TA67 174 aa3.49□□□□□ -1.85
PXN-204ENST00000424649 MT1AP04731 61 aa3.45□□□□□ -1.86
PXN-204ENST00000424649 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.42□□□□□ -1.86
PXN-204ENST00000424649 SPRR2DP22532 72 aa3.4□□□□□ -1.87
PXN-204ENST00000424649 KRTAP6-2Q3LI66 62 aa3.39□□□□□ -1.87
PXN-204ENST00000424649 KRTAP6-3Q3LI67 103 aa3.39□□□□□ -1.87
PXN-204ENST00000424649 KRTAP5-5Q701N2 237 aaPredicted RBP3.32□□□□□ -1.88
PXN-204ENST00000424649 MT4P47944 62 aa3.24□□□□□ -1.89
PXN-204ENST00000424649 KRTAP9-4Q9BYQ2 154 aa3.23□□□□□ -1.89
PXN-204ENST00000424649 MT3P25713 68 aa3.22□□□□□ -1.89
PXN-204ENST00000424649 NEBP20929 6669 aa3.13□□□□□ -1.91
PXN-204ENST00000424649 MUC19Q7Z5P9 8384 aa3.07□□□□□ -1.92
PXN-204ENST00000424649 LCE1DQ5T752 114 aa3.06□□□□□ -1.92
PXN-204ENST00000424649 KRTAP4-6Q9BYQ5 205 aa3.03□□□□□ -1.92
PXN-204ENST00000424649 KRTAP2-2Q9BYT5 123 aa3.03□□□□□ -1.92
PXN-204ENST00000424649 LCE1BQ5T7P3 118 aa3.02□□□□□ -1.93
PXN-204ENST00000424649 KRTAP5-4Q6L8H1 288 aa3.02□□□□□ -1.93
PXN-204ENST00000424649 LCE4AQ5TA78 99 aa2.91□□□□□ -1.94
PXN-204ENST00000424649 KRTAP20-2Q3LI61 65 aa2.83□□□□□ -1.96
PXN-204ENST00000424649 KRTAP4-11Q9BYQ6 195 aa2.83□□□□□ -1.96
PXN-204ENST00000424649 MUC5ACP98088 5654 aa2.82□□□□□ -1.96
PXN-204ENST00000424649 KRTAP20-1Q3LI63 56 aa2.81□□□□□ -1.96
PXN-204ENST00000424649 HMCN1Q96RW7 5635 aa2.8□□□□□ -1.96
PXN-204ENST00000424649 KRTAP5-2Q701N4 177 aa2.78□□□□□ -1.97
PXN-204ENST00000424649 LCE1EQ5T753 118 aa2.75□□□□□ -1.97
PXN-204ENST00000424649 KRTAP5-3Q6L8H2 238 aa2.71□□□□□ -1.98
PXN-204ENST00000424649 KRTAP4-4Q9BYR3 166 aa2.56□□□□□ -2
PXN-204ENST00000424649 LCE1FQ5T754 118 aa2.45□□□□□ -2.02
PXN-204ENST00000424649 KRTAP5-10Q6L8G5 202 aa2.44□□□□□ -2.02
PXN-204ENST00000424649 GPR98Q8WXG9 6306 aa2.39□□□□□ -2.03
PXN-204ENST00000424649 KRTAP5-1Q6L8H4 278 aa2.38□□□□□ -2.03
PXN-204ENST00000424649 MUC5BQ9HC84 5762 aaPredicted RBP2.38□□□□□ -2.03
PXN-204ENST00000424649 KRTAP4-12Q9BQ66 201 aa2.37□□□□□ -2.03
PXN-204ENST00000424649 KRTAP4-2Q9BYR5 136 aa2.37□□□□□ -2.03
PXN-204ENST00000424649 AHNAK2Q8IVF2 5795 aa2.33□□□□□ -2.04
PXN-204ENST00000424649 LCE1CQ5T751 118 aa2.33□□□□□ -2.04
PXN-204ENST00000424649 KRTAP5-8O75690 187 aa2.31□□□□□ -2.04
PXN-204ENST00000424649 KRTAP5-7Q6L8G8 165 aa2.25□□□□□ -2.05
PXN-204ENST00000424649 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.19□□□□□ -2.06
PXN-204ENST00000424649 KRTAP21-2Q3LI59 83 aa2.17□□□□□ -2.06
PXN-204ENST00000424649 KRTAP9-9Q9BYP9 154 aa2.13□□□□□ -2.07
PXN-204ENST00000424649 KRTAP5-11Q6L8G4 156 aa2.04□□□□□ -2.08
PXN-204ENST00000424649 KRTAP21-1Q3LI58 79 aa1.93□□□□□ -2.1
PXN-204ENST00000424649 AHNAKQ09666 5890 aaKnown RBP1.77□□□□□ -2.13
PXN-204ENST00000424649 PHGR1C9JFL3 82 aa1.76□□□□□ -2.13
PXN-204ENST00000424649 MUC16Q8WXI7 14507 aa1.16□□□□□ -2.22
Retrieved 77 of 20,778 RNA–protein pairs in 95.1 ms