RNA–Protein interactions for RNA: ENST00000424536.2

GRAMD1A-203, Transcript of GRAM domain containing 1A, humanhuman

TSL 2 BASIC

Gene GRAMD1A, Length 808 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRAMD1A-203ENST00000424536 MT1MQ8N339 61 aa4.85□□□□□ -1.63
GRAMD1A-203ENST00000424536 DSTQ03001 7570 aaKnown RBP4.83□□□□□ -1.64
GRAMD1A-203ENST00000424536 Q1T7F1 81 aa4.82□□□□□ -1.64
GRAMD1A-203ENST00000424536 KRTAP25-1Q3LHN0 102 aa4.82□□□□□ -1.64
GRAMD1A-203ENST00000424536 PSPHP1O15172 72 aa4.8□□□□□ -1.64
GRAMD1A-203ENST00000424536 KRTAP12-3P60328 96 aa4.79□□□□□ -1.64
GRAMD1A-203ENST00000424536 LCE4AQ5TA78 99 aa4.75□□□□□ -1.65
GRAMD1A-203ENST00000424536 KRTAP4-9Q9BYQ8 210 aa4.74□□□□□ -1.65
GRAMD1A-203ENST00000424536 A6NED7 52 aa4.7□□□□□ -1.66
GRAMD1A-203ENST00000424536 KRTAP23-1A1A580 65 aa4.66□□□□□ -1.66
GRAMD1A-203ENST00000424536 KRTAP19-4Q3LI73 84 aa4.66□□□□□ -1.66
GRAMD1A-203ENST00000424536 LCE1DQ5T752 114 aa4.66□□□□□ -1.66
GRAMD1A-203ENST00000424536 KRTAP4-3Q9BYR4 195 aa4.66□□□□□ -1.66
GRAMD1A-203ENST00000424536 MT4P47944 62 aa4.63□□□□□ -1.67
GRAMD1A-203ENST00000424536 RPS28P62857 69 aaKnown RBP4.61□□□□□ -1.67
GRAMD1A-203ENST00000424536 CDC42SE1Q9NRR8 79 aa4.61□□□□□ -1.67
GRAMD1A-203ENST00000424536 KRTAP5-4Q6L8H1 288 aa4.59□□□□□ -1.67
GRAMD1A-203ENST00000424536 KRTAP4-7Q9BYR0 210 aa4.57□□□□□ -1.68
GRAMD1A-203ENST00000424536 PCP4P48539 62 aa4.52□□□□□ -1.69
GRAMD1A-203ENST00000424536 ROMO1P60602 79 aa4.5□□□□□ -1.69
GRAMD1A-203ENST00000424536 KRTAP15-1Q3LI76 137 aa4.5□□□□□ -1.69
GRAMD1A-203ENST00000424536 KRTAP4-6Q9BYQ5 205 aa4.46□□□□□ -1.7
GRAMD1A-203ENST00000424536 KRTAP12-4P60329 112 aa4.41□□□□□ -1.7
GRAMD1A-203ENST00000424536 LCE3CQ5T5A8 94 aa4.41□□□□□ -1.7
GRAMD1A-203ENST00000424536 KRTAP5-5Q701N2 237 aaPredicted RBP4.41□□□□□ -1.7
GRAMD1A-203ENST00000424536 HMCN1Q96RW7 5635 aa4.41□□□□□ -1.7
GRAMD1A-203ENST00000424536 SPRR5A0A1B0GTR4 108 aa4.37□□□□□ -1.71
GRAMD1A-203ENST00000424536 KRTAP20-2Q3LI61 65 aa4.34□□□□□ -1.71
GRAMD1A-203ENST00000424536 LOC100996750A0A140TA64 210 aa4.33□□□□□ -1.72
GRAMD1A-203ENST00000424536 AHNAK2Q8IVF2 5795 aa4.31□□□□□ -1.72
GRAMD1A-203ENST00000424536 KRTAP5-10Q6L8G5 202 aa4.3□□□□□ -1.72
GRAMD1A-203ENST00000424536 KRTAP5-3Q6L8H2 238 aa4.23□□□□□ -1.73
GRAMD1A-203ENST00000424536 SYNE1Q8NF91 8797 aaKnown RBP4.21□□□□□ -1.74
GRAMD1A-203ENST00000424536 MT1AP04731 61 aa4.18□□□□□ -1.74
GRAMD1A-203ENST00000424536 KRTAP5-7Q6L8G8 165 aa4.15□□□□□ -1.75
GRAMD1A-203ENST00000424536 KRTAP6-1Q3LI64 71 aa4.1□□□□□ -1.75
GRAMD1A-203ENST00000424536 KRTAP9-6A8MVA2 160 aa4.05□□□□□ -1.76
GRAMD1A-203ENST00000424536 BRK1Q8WUW1 75 aa4.05□□□□□ -1.76
GRAMD1A-203ENST00000424536 KRTAP9-4Q9BYQ2 154 aa4.04□□□□□ -1.76
GRAMD1A-203ENST00000424536 KRTAP5-2Q701N4 177 aa4.02□□□□□ -1.77
GRAMD1A-203ENST00000424536 KRTAP4-11Q9BYQ6 195 aa3.96□□□□□ -1.78
GRAMD1A-203ENST00000424536 KRTAP6-2Q3LI66 62 aa3.92□□□□□ -1.78
GRAMD1A-203ENST00000424536 AHNAKQ09666 5890 aaKnown RBP3.89□□□□□ -1.79
GRAMD1A-203ENST00000424536 MT3P25713 68 aa3.86□□□□□ -1.79
GRAMD1A-203ENST00000424536 PMAIP1Q13794 54 aa3.83□□□□□ -1.8
GRAMD1A-203ENST00000424536 KRTAP5-8O75690 187 aa3.8□□□□□ -1.8
GRAMD1A-203ENST00000424536 MUC5BQ9HC84 5762 aaPredicted RBP3.72□□□□□ -1.81
GRAMD1A-203ENST00000424536 MUC5ACP98088 5654 aa3.71□□□□□ -1.82
GRAMD1A-203ENST00000424536 OBSCNQ5VST9 7968 aa3.69□□□□□ -1.82
GRAMD1A-203ENST00000424536 KRTAP9-9Q9BYP9 154 aa3.68□□□□□ -1.82
GRAMD1A-203ENST00000424536 KRTAP5-1Q6L8H4 278 aa3.59□□□□□ -1.83
GRAMD1A-203ENST00000424536 PRAC1Q96KF2 57 aa3.58□□□□□ -1.84
GRAMD1A-203ENST00000424536 PRO0628Q9UI54 55 aa3.54□□□□□ -1.84
GRAMD1A-203ENST00000424536 LCE1EQ5T753 118 aa3.53□□□□□ -1.84
GRAMD1A-203ENST00000424536 KTN1-AS1Q86SY8 53 aa3.39□□□□□ -1.87
GRAMD1A-203ENST00000424536 LCE1BQ5T7P3 118 aa3.29□□□□□ -1.88
GRAMD1A-203ENST00000424536 SVIPQ8NHG7 77 aa3.28□□□□□ -1.88
GRAMD1A-203ENST00000424536 LCE1CQ5T751 118 aa3.26□□□□□ -1.89
GRAMD1A-203ENST00000424536 KRTAP4-2Q9BYR5 136 aa3.25□□□□□ -1.89
GRAMD1A-203ENST00000424536 LCE3DQ9BYE3 92 aa3.22□□□□□ -1.89
GRAMD1A-203ENST00000424536 LUZP6Q538Z0 58 aa3.21□□□□□ -1.9
GRAMD1A-203ENST00000424536 LCE3EQ5T5B0 92 aa3.04□□□□□ -1.92
GRAMD1A-203ENST00000424536 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.96□□□□□ -1.94
GRAMD1A-203ENST00000424536 KRTAP5-11Q6L8G4 156 aa2.94□□□□□ -1.94
GRAMD1A-203ENST00000424536 KRTAP4-12Q9BQ66 201 aa2.92□□□□□ -1.94
GRAMD1A-203ENST00000424536 LCE1FQ5T754 118 aa2.91□□□□□ -1.94
GRAMD1A-203ENST00000424536 KRTAP21-2Q3LI59 83 aa2.69□□□□□ -1.98
GRAMD1A-203ENST00000424536 PHGR1C9JFL3 82 aa2.54□□□□□ -2
GRAMD1A-203ENST00000424536 NDUFAF8A1L188 74 aa2.48□□□□□ -2.01
GRAMD1A-203ENST00000424536 H3BS24 57 aa2.48□□□□□ -2.01
GRAMD1A-203ENST00000424536 KRTAP4-4Q9BYR3 166 aa2.44□□□□□ -2.02
GRAMD1A-203ENST00000424536 MUC19Q7Z5P9 8384 aa2.29□□□□□ -2.04
GRAMD1A-203ENST00000424536 PRM1P04553 51 aa2.27□□□□□ -2.05
GRAMD1A-203ENST00000424536 INE1O15225 51 aa2.07□□□□□ -2.08
GRAMD1A-203ENST00000424536 A0A0A0MQY5 61 aa2.06□□□□□ -2.08
GRAMD1A-203ENST00000424536 KRTAP21-1Q3LI58 79 aa1.95□□□□□ -2.1
GRAMD1A-203ENST00000424536 MUC16Q8WXI7 14507 aa1.62□□□□□ -2.15
Retrieved 77 of 20,778 RNA–protein pairs in 6.2 ms