RNA–Protein interactions for RNA: ENST00000424339.1

EPHA4-206, Transcript of EPH receptor A4, humanhuman

TSL 2

Gene EPHA4, Length 492 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-206ENST00000424339 P0C880 135 aa3.15□□□□□ -1.91
EPHA4-206ENST00000424339 LINC01554Q52M75 96 aa3.15□□□□□ -1.91
EPHA4-206ENST00000424339 K7ERS5 55 aa3.14□□□□□ -1.91
EPHA4-206ENST00000424339 CAMK2N1Q7Z7J9 78 aa3.13□□□□□ -1.91
EPHA4-206ENST00000424339 KRTAP25-1Q3LHN0 102 aa3.12□□□□□ -1.91
EPHA4-206ENST00000424339 KRTAP19-8Q3LI54 63 aa3.12□□□□□ -1.91
EPHA4-206ENST00000424339 ROMO1P60602 79 aa3.09□□□□□ -1.91
EPHA4-206ENST00000424339 A0A0D9SG42 100 aa3.07□□□□□ -1.92
EPHA4-206ENST00000424339 MT1BP07438 61 aa3.05□□□□□ -1.92
EPHA4-206ENST00000424339 KRTAP12-1P59990 96 aa3.05□□□□□ -1.92
EPHA4-206ENST00000424339 PLAC4Q8WY50 150 aa3.05□□□□□ -1.92
EPHA4-206ENST00000424339 KRTAP12-2P59991 146 aa3.04□□□□□ -1.92
EPHA4-206ENST00000424339 KRTAP19-6Q3LI70 58 aa3.04□□□□□ -1.92
EPHA4-206ENST00000424339 USH2AO75445 5202 aa3.03□□□□□ -1.92
EPHA4-206ENST00000424339 PRO2289Q9P1D8 64 aa3.01□□□□□ -1.93
EPHA4-206ENST00000424339 SPINT4Q6UDR6 99 aa2.97□□□□□ -1.93
EPHA4-206ENST00000424339 SSPOA2VEC9 5147 aa2.95□□□□□ -1.94
EPHA4-206ENST00000424339 C10orf95Q9H7T3 257 aa2.94□□□□□ -1.94
EPHA4-206ENST00000424339 MT1XP80297 61 aa2.92□□□□□ -1.94
EPHA4-206ENST00000424339 LUZP6Q538Z0 58 aa2.91□□□□□ -1.94
EPHA4-206ENST00000424339 FCGBPQ9Y6R7 5405 aaPredicted RBP2.9□□□□□ -1.95
EPHA4-206ENST00000424339 LCE3EQ5T5B0 92 aa2.87□□□□□ -1.95
EPHA4-206ENST00000424339 KRTAP5-5Q701N2 237 aaPredicted RBP2.85□□□□□ -1.95
EPHA4-206ENST00000424339 KRTAP5-8O75690 187 aa2.84□□□□□ -1.95
EPHA4-206ENST00000424339 SYNE2Q8WXH0 6885 aaKnown RBP2.81□□□□□ -1.96
EPHA4-206ENST00000424339 LCE1CQ5T751 118 aa2.8□□□□□ -1.96
EPHA4-206ENST00000424339 LCE1BQ5T7P3 118 aa2.8□□□□□ -1.96
EPHA4-206ENST00000424339 TNP1P09430 55 aa2.78□□□□□ -1.96
EPHA4-206ENST00000424339 PP632Q6XCG6 107 aa2.78□□□□□ -1.96
EPHA4-206ENST00000424339 MACF1Q9UPN3 7388 aaKnown RBP2.77□□□□□ -1.97
EPHA4-206ENST00000424339 KRTAP6-3Q3LI67 103 aa2.75□□□□□ -1.97
EPHA4-206ENST00000424339 KRTAP8-1Q8IUC2 63 aa2.74□□□□□ -1.97
EPHA4-206ENST00000424339 KRTAP20-1Q3LI63 56 aa2.7□□□□□ -1.98
EPHA4-206ENST00000424339 NEBP20929 6669 aa2.68□□□□□ -1.98
EPHA4-206ENST00000424339 SPRR2FQ96RM1 72 aa2.66□□□□□ -1.98
EPHA4-206ENST00000424339 KMT2DO14686 5537 aa2.64□□□□□ -1.99
EPHA4-206ENST00000424339 SPRR5A0A1B0GTR4 108 aa2.62□□□□□ -1.99
EPHA4-206ENST00000424339 KRTAP19-7Q3SYF9 63 aa2.6□□□□□ -1.99
EPHA4-206ENST00000424339 MUC12Q9UKN1 5478 aa2.59□□□□□ -1.99
EPHA4-206ENST00000424339 MT1EP04732 61 aa2.58□□□□□ -2
EPHA4-206ENST00000424339 KRTAP19-5Q3LI72 72 aa2.58□□□□□ -2
EPHA4-206ENST00000424339 SPRR2EP22531 72 aa2.57□□□□□ -2
EPHA4-206ENST00000424339 SPRR2BP35325 72 aa2.57□□□□□ -2
EPHA4-206ENST00000424339 SPRR2AP35326 72 aa2.57□□□□□ -2
EPHA4-206ENST00000424339 KRTAP12-3P60328 96 aa2.57□□□□□ -2
EPHA4-206ENST00000424339 KRTAP19-3Q7Z4W3 81 aa2.53□□□□□ -2
EPHA4-206ENST00000424339 MT1GP13640 62 aa2.52□□□□□ -2.01
EPHA4-206ENST00000424339 GPR98Q8WXG9 6306 aa2.52□□□□□ -2.01
EPHA4-206ENST00000424339 MDN1Q9NU22 5596 aa2.5□□□□□ -2.01
EPHA4-206ENST00000424339 MT1LQ93083 61 aa2.5□□□□□ -2.01
EPHA4-206ENST00000424339 SPRR2DP22532 72 aa2.49□□□□□ -2.01
EPHA4-206ENST00000424339 KRTAP2-3P0C7H8 128 aa2.46□□□□□ -2.02
EPHA4-206ENST00000424339 KRTAP2-4Q9BYR9 128 aa2.46□□□□□ -2.02
EPHA4-206ENST00000424339 MT1MQ8N339 61 aa2.44□□□□□ -2.02
EPHA4-206ENST00000424339 KRTAP2-1Q9BYU5 128 aa2.39□□□□□ -2.03
EPHA4-206ENST00000424339 DSTQ03001 7570 aaKnown RBP2.31□□□□□ -2.04
EPHA4-206ENST00000424339 MUC19Q7Z5P9 8384 aa2.29□□□□□ -2.04
EPHA4-206ENST00000424339 INE1O15225 51 aa2.23□□□□□ -2.05
EPHA4-206ENST00000424339 KRTAP5-7Q6L8G8 165 aa2.23□□□□□ -2.05
EPHA4-206ENST00000424339 AHNAK2Q8IVF2 5795 aa2.16□□□□□ -2.06
EPHA4-206ENST00000424339 KRTAP12-4P60329 112 aa2.16□□□□□ -2.06
EPHA4-206ENST00000424339 MT1AP04731 61 aa2.15□□□□□ -2.07
EPHA4-206ENST00000424339 LCE3DQ9BYE3 92 aa2.14□□□□□ -2.07
EPHA4-206ENST00000424339 MT4P47944 62 aa2.13□□□□□ -2.07
EPHA4-206ENST00000424339 KRTAP5-10Q6L8G5 202 aa2.13□□□□□ -2.07
EPHA4-206ENST00000424339 HMCN1Q96RW7 5635 aa2.09□□□□□ -2.08
EPHA4-206ENST00000424339 KRTAP6-1Q3LI64 71 aa2.08□□□□□ -2.08
EPHA4-206ENST00000424339 KRTAP20-2Q3LI61 65 aa2.07□□□□□ -2.08
EPHA4-206ENST00000424339 SYNE1Q8NF91 8797 aaKnown RBP2.06□□□□□ -2.08
EPHA4-206ENST00000424339 KRTAP21-2Q3LI59 83 aa2.02□□□□□ -2.09
EPHA4-206ENST00000424339 KRTAP6-2Q3LI66 62 aa1.96□□□□□ -2.1
EPHA4-206ENST00000424339 AHNAKQ09666 5890 aaKnown RBP1.91□□□□□ -2.1
EPHA4-206ENST00000424339 MUC5ACP98088 5654 aa1.85□□□□□ -2.11
EPHA4-206ENST00000424339 MUC5BQ9HC84 5762 aaPredicted RBP1.85□□□□□ -2.11
EPHA4-206ENST00000424339 PRM1P04553 51 aa1.63□□□□□ -2.15
EPHA4-206ENST00000424339 PHGR1C9JFL3 82 aa1.28□□□□□ -2.2
EPHA4-206ENST00000424339 KRTAP21-1Q3LI58 79 aa1.06□□□□□ -2.24
EPHA4-206ENST00000424339 MUC16Q8WXI7 14507 aa0.83□□□□□ -2.28
Retrieved 78 of 20,778 RNA–protein pairs in 79.2 ms