RNA–Protein interactions for RNA: ENST00000424143.5

C9orf3-204, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 1,605 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-204ENST00000424143 MT1GP13640 62 aa4.9□□□□□ -1.63
C9orf3-204ENST00000424143 SSPOA2VEC9 5147 aa4.89□□□□□ -1.63
C9orf3-204ENST00000424143 LOC100996750A0A140TA64 210 aa4.86□□□□□ -1.63
C9orf3-204ENST00000424143 KRTAP4-6Q9BYQ5 205 aa4.86□□□□□ -1.63
C9orf3-204ENST00000424143 MT1MQ8N339 61 aa4.85□□□□□ -1.63
C9orf3-204ENST00000424143 KRTAP19-3Q7Z4W3 81 aa4.84□□□□□ -1.63
C9orf3-204ENST00000424143 KRTAP4-3Q9BYR4 195 aa4.74□□□□□ -1.65
C9orf3-204ENST00000424143 KRTAP12-4P60329 112 aa4.68□□□□□ -1.66
C9orf3-204ENST00000424143 LCE5AQ5TCM9 118 aa4.67□□□□□ -1.66
C9orf3-204ENST00000424143 MT1AP04731 61 aa4.63□□□□□ -1.67
C9orf3-204ENST00000424143 CRCT1Q9UGL9 99 aa4.49□□□□□ -1.69
C9orf3-204ENST00000424143 FCGBPQ9Y6R7 5405 aaPredicted RBP4.47□□□□□ -1.69
C9orf3-204ENST00000424143 SPRR2FQ96RM1 72 aa4.46□□□□□ -1.69
C9orf3-204ENST00000424143 LCE3BQ5TA77 95 aa4.41□□□□□ -1.7
C9orf3-204ENST00000424143 KRTAP6-1Q3LI64 71 aa4.37□□□□□ -1.71
C9orf3-204ENST00000424143 MUC12Q9UKN1 5478 aa4.37□□□□□ -1.71
C9orf3-204ENST00000424143 LCE3DQ9BYE3 92 aa4.36□□□□□ -1.71
C9orf3-204ENST00000424143 LCE3EQ5T5B0 92 aa4.35□□□□□ -1.71
C9orf3-204ENST00000424143 FSIP2Q5CZC0 6907 aa4.35□□□□□ -1.71
C9orf3-204ENST00000424143 KRTAP5-5Q701N2 237 aaPredicted RBP4.33□□□□□ -1.72
C9orf3-204ENST00000424143 KRTAP9-2Q9BYQ4 174 aa4.32□□□□□ -1.72
C9orf3-204ENST00000424143 KRTAP5-9P26371 169 aa4.3□□□□□ -1.72
C9orf3-204ENST00000424143 KRTAP4-9Q9BYQ8 210 aa4.29□□□□□ -1.72
C9orf3-204ENST00000424143 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.28□□□□□ -1.72
C9orf3-204ENST00000424143 KRTAP9-6A0A140TA67 174 aa4.26□□□□□ -1.73
C9orf3-204ENST00000424143 LCE1AQ5T7P2 110 aa4.21□□□□□ -1.73
C9orf3-204ENST00000424143 KRTAP9-4Q9BYQ2 154 aa4.17□□□□□ -1.74
C9orf3-204ENST00000424143 MACF1Q9UPN3 7388 aaKnown RBP4.15□□□□□ -1.75
C9orf3-204ENST00000424143 SYNE1Q8NF91 8797 aaKnown RBP4.14□□□□□ -1.75
C9orf3-204ENST00000424143 PRM1P04553 51 aa4.13□□□□□ -1.75
C9orf3-204ENST00000424143 SPRR2EP22531 72 aa4.13□□□□□ -1.75
C9orf3-204ENST00000424143 SPRR2BP35325 72 aa4.13□□□□□ -1.75
C9orf3-204ENST00000424143 SPRR2AP35326 72 aa4.13□□□□□ -1.75
C9orf3-204ENST00000424143 KRTAP9-7A8MTY7 169 aa4.1□□□□□ -1.75
C9orf3-204ENST00000424143 KRTAP9-9Q9BYP9 154 aa4.06□□□□□ -1.76
C9orf3-204ENST00000424143 KRTAP6-3Q3LI67 103 aa4.03□□□□□ -1.77
C9orf3-204ENST00000424143 KRTAP6-2Q3LI66 62 aa3.99□□□□□ -1.77
C9orf3-204ENST00000424143 MT3P25713 68 aa3.99□□□□□ -1.77
C9orf3-204ENST00000424143 KRTAP4-12Q9BQ66 201 aa3.99□□□□□ -1.77
C9orf3-204ENST00000424143 DSTQ03001 7570 aaKnown RBP3.97□□□□□ -1.77
C9orf3-204ENST00000424143 SPRR2DP22532 72 aa3.97□□□□□ -1.77
C9orf3-204ENST00000424143 MDN1Q9NU22 5596 aa3.92□□□□□ -1.78
C9orf3-204ENST00000424143 SYNE2Q8WXH0 6885 aaKnown RBP3.91□□□□□ -1.78
C9orf3-204ENST00000424143 LCE1DQ5T752 114 aa3.85□□□□□ -1.79
C9orf3-204ENST00000424143 KRTAP4-2Q9BYR5 136 aa3.77□□□□□ -1.81
C9orf3-204ENST00000424143 KRTAP5-4Q6L8H1 288 aa3.76□□□□□ -1.81
C9orf3-204ENST00000424143 KRTAP2-2Q9BYT5 123 aa3.74□□□□□ -1.81
C9orf3-204ENST00000424143 KRTAP5-3Q6L8H2 238 aa3.62□□□□□ -1.83
C9orf3-204ENST00000424143 LCE4AQ5TA78 99 aa3.59□□□□□ -1.84
C9orf3-204ENST00000424143 KRTAP4-11Q9BYQ6 195 aa3.58□□□□□ -1.84
C9orf3-204ENST00000424143 KRTAP5-2Q701N4 177 aa3.56□□□□□ -1.84
C9orf3-204ENST00000424143 NEBP20929 6669 aa3.5□□□□□ -1.85
C9orf3-204ENST00000424143 KRTAP20-2Q3LI61 65 aa3.43□□□□□ -1.86
C9orf3-204ENST00000424143 OBSCNQ5VST9 7968 aa3.41□□□□□ -1.86
C9orf3-204ENST00000424143 MT4P47944 62 aa3.38□□□□□ -1.87
C9orf3-204ENST00000424143 KRTAP20-1Q3LI63 56 aa3.36□□□□□ -1.87
C9orf3-204ENST00000424143 LCE1EQ5T753 118 aa3.31□□□□□ -1.88
C9orf3-204ENST00000424143 MUC5ACP98088 5654 aa3.22□□□□□ -1.89
C9orf3-204ENST00000424143 KRTAP5-1Q6L8H4 278 aa3.19□□□□□ -1.9
C9orf3-204ENST00000424143 KRTAP5-10Q6L8G5 202 aa3.19□□□□□ -1.9
C9orf3-204ENST00000424143 HMCN1Q96RW7 5635 aa3.17□□□□□ -1.9
C9orf3-204ENST00000424143 LCE1CQ5T751 118 aa3.08□□□□□ -1.92
C9orf3-204ENST00000424143 LCE1BQ5T7P3 118 aa3.08□□□□□ -1.92
C9orf3-204ENST00000424143 KRTAP5-6Q6L8G9 129 aaPredicted RBP3□□□□□ -1.93
C9orf3-204ENST00000424143 KRTAP21-2Q3LI59 83 aa2.88□□□□□ -1.95
C9orf3-204ENST00000424143 KRTAP5-7Q6L8G8 165 aa2.82□□□□□ -1.96
C9orf3-204ENST00000424143 KRTAP5-8O75690 187 aa2.81□□□□□ -1.96
C9orf3-204ENST00000424143 KRTAP21-1Q3LI58 79 aa2.75□□□□□ -1.97
C9orf3-204ENST00000424143 GPR98Q8WXG9 6306 aa2.7□□□□□ -1.98
C9orf3-204ENST00000424143 KRTAP5-11Q6L8G4 156 aa2.64□□□□□ -1.99
C9orf3-204ENST00000424143 AHNAK2Q8IVF2 5795 aa2.58□□□□□ -2
C9orf3-204ENST00000424143 MUC5BQ9HC84 5762 aaPredicted RBP2.46□□□□□ -2.02
C9orf3-204ENST00000424143 LCE1FQ5T754 118 aa2.45□□□□□ -2.02
C9orf3-204ENST00000424143 KRTAP4-4Q9BYR3 166 aa2.41□□□□□ -2.02
C9orf3-204ENST00000424143 PHGR1C9JFL3 82 aa2.25□□□□□ -2.05
C9orf3-204ENST00000424143 MUC19Q7Z5P9 8384 aa2.14□□□□□ -2.07
C9orf3-204ENST00000424143 AHNAKQ09666 5890 aaKnown RBP2.05□□□□□ -2.08
C9orf3-204ENST00000424143 MUC16Q8WXI7 14507 aa1.59□□□□□ -2.15
Retrieved 78 of 20,778 RNA–protein pairs in 127.5 ms