RNA–Protein interactions for RNA: ENST00000423653.5

CCDC78-203, Transcript of coiled-coil domain containing 78, humanhuman

APPRIS ALT2 TSL 3

Gene CCDC78, Length 621 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-203ENST00000423653 CCDC179H3BU77 68 aa5.82□□□□□ -1.48
CCDC78-203ENST00000423653 LINC01558Q9Y6Z2 57 aa5.79□□□□□ -1.48
CCDC78-203ENST00000423653 HMCN1Q96RW7 5635 aa5.78□□□□□ -1.48
CCDC78-203ENST00000423653 KRTAP4-3Q9BYR4 195 aa5.78□□□□□ -1.48
CCDC78-203ENST00000423653 KRTAP5-4Q6L8H1 288 aa5.76□□□□□ -1.49
CCDC78-203ENST00000423653 KRTAP12-3P60328 96 aa5.73□□□□□ -1.49
CCDC78-203ENST00000423653 UQCR11O14957 56 aa5.72□□□□□ -1.49
CCDC78-203ENST00000423653 TMEM258P61165 79 aa5.66□□□□□ -1.5
CCDC78-203ENST00000423653 KRTAP4-6Q9BYQ5 205 aa5.62□□□□□ -1.51
CCDC78-203ENST00000423653 KRTAP4-7Q9BYR0 210 aa5.61□□□□□ -1.51
CCDC78-203ENST00000423653 KRTAP25-1Q3LHN0 102 aa5.59□□□□□ -1.51
CCDC78-203ENST00000423653 AHNAK2Q8IVF2 5795 aa5.58□□□□□ -1.52
CCDC78-203ENST00000423653 K7ERS5 55 aa5.55□□□□□ -1.52
CCDC78-203ENST00000423653 MIR22HGQ0VDD5 57 aa5.55□□□□□ -1.52
CCDC78-203ENST00000423653 KRTAP5-10Q6L8G5 202 aa5.55□□□□□ -1.52
CCDC78-203ENST00000423653 KRTAP5-5Q701N2 237 aaPredicted RBP5.47□□□□□ -1.53
CCDC78-203ENST00000423653 KRTAP20-2Q3LI61 65 aa5.45□□□□□ -1.54
CCDC78-203ENST00000423653 KRTAP19-4Q3LI73 84 aa5.44□□□□□ -1.54
CCDC78-203ENST00000423653 SPRR5A0A1B0GTR4 108 aa5.43□□□□□ -1.54
CCDC78-203ENST00000423653 KRTAP12-4P60329 112 aa5.42□□□□□ -1.54
CCDC78-203ENST00000423653 V9GYY9 64 aa5.42□□□□□ -1.54
CCDC78-203ENST00000423653 KRTAP5-3Q6L8H2 238 aa5.4□□□□□ -1.54
CCDC78-203ENST00000423653 KRTAP5-7Q6L8G8 165 aa5.37□□□□□ -1.55
CCDC78-203ENST00000423653 KRTAP23-1A1A580 65 aa5.36□□□□□ -1.55
CCDC78-203ENST00000423653 PSPHP1O15172 72 aa5.36□□□□□ -1.55
CCDC78-203ENST00000423653 LOC100996750A0A140TA64 210 aa5.33□□□□□ -1.56
CCDC78-203ENST00000423653 PCP4P48539 62 aa5.33□□□□□ -1.56
CCDC78-203ENST00000423653 Q1T7F1 81 aa5.31□□□□□ -1.56
CCDC78-203ENST00000423653 KRTAP15-1Q3LI76 137 aa5.31□□□□□ -1.56
CCDC78-203ENST00000423653 LCE3CQ5T5A8 94 aa5.25□□□□□ -1.57
CCDC78-203ENST00000423653 A6NED7 52 aa5.21□□□□□ -1.58
CCDC78-203ENST00000423653 CDC42SE1Q9NRR8 79 aa5.21□□□□□ -1.58
CCDC78-203ENST00000423653 SYNE1Q8NF91 8797 aaKnown RBP5.18□□□□□ -1.58
CCDC78-203ENST00000423653 MT1AP04731 61 aa5.09□□□□□ -1.59
CCDC78-203ENST00000423653 RPS28P62857 69 aaKnown RBP5.08□□□□□ -1.6
CCDC78-203ENST00000423653 ROMO1P60602 79 aa5.07□□□□□ -1.6
CCDC78-203ENST00000423653 KRTAP6-1Q3LI64 71 aa5.04□□□□□ -1.6
CCDC78-203ENST00000423653 KRTAP5-2Q701N4 177 aa5.03□□□□□ -1.6
CCDC78-203ENST00000423653 KRTAP4-11Q9BYQ6 195 aa5□□□□□ -1.61
CCDC78-203ENST00000423653 KRTAP9-6A8MVA2 160 aa4.91□□□□□ -1.62
CCDC78-203ENST00000423653 KRTAP9-4Q9BYQ2 154 aa4.9□□□□□ -1.63
CCDC78-203ENST00000423653 KRTAP6-2Q3LI66 62 aa4.85□□□□□ -1.63
CCDC78-203ENST00000423653 KRTAP5-8O75690 187 aa4.81□□□□□ -1.64
CCDC78-203ENST00000423653 OBSCNQ5VST9 7968 aa4.7□□□□□ -1.66
CCDC78-203ENST00000423653 MT3P25713 68 aa4.67□□□□□ -1.66
CCDC78-203ENST00000423653 MUC5ACP98088 5654 aa4.64□□□□□ -1.67
CCDC78-203ENST00000423653 KRTAP9-9Q9BYP9 154 aa4.63□□□□□ -1.67
CCDC78-203ENST00000423653 MUC5BQ9HC84 5762 aaPredicted RBP4.6□□□□□ -1.67
CCDC78-203ENST00000423653 AHNAKQ09666 5890 aaKnown RBP4.58□□□□□ -1.68
CCDC78-203ENST00000423653 KRTAP5-1Q6L8H4 278 aa4.51□□□□□ -1.69
CCDC78-203ENST00000423653 BRK1Q8WUW1 75 aa4.46□□□□□ -1.7
CCDC78-203ENST00000423653 PRO0628Q9UI54 55 aa4.34□□□□□ -1.71
CCDC78-203ENST00000423653 LCE1EQ5T753 118 aa4.32□□□□□ -1.72
CCDC78-203ENST00000423653 PMAIP1Q13794 54 aa4.26□□□□□ -1.73
CCDC78-203ENST00000423653 LCE1BQ5T7P3 118 aa4.06□□□□□ -1.76
CCDC78-203ENST00000423653 KRTAP4-2Q9BYR5 136 aa4.05□□□□□ -1.76
CCDC78-203ENST00000423653 KTN1-AS1Q86SY8 53 aa4.04□□□□□ -1.76
CCDC78-203ENST00000423653 LCE1CQ5T751 118 aa4□□□□□ -1.77
CCDC78-203ENST00000423653 PRAC1Q96KF2 57 aa3.88□□□□□ -1.79
CCDC78-203ENST00000423653 SVIPQ8NHG7 77 aa3.81□□□□□ -1.8
CCDC78-203ENST00000423653 LCE3DQ9BYE3 92 aa3.77□□□□□ -1.81
CCDC78-203ENST00000423653 KRTAP4-12Q9BQ66 201 aa3.69□□□□□ -1.82
CCDC78-203ENST00000423653 KRTAP5-11Q6L8G4 156 aa3.65□□□□□ -1.83
CCDC78-203ENST00000423653 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.63□□□□□ -1.83
CCDC78-203ENST00000423653 LCE1FQ5T754 118 aa3.58□□□□□ -1.84
CCDC78-203ENST00000423653 LCE3EQ5T5B0 92 aa3.53□□□□□ -1.84
CCDC78-203ENST00000423653 LUZP6Q538Z0 58 aa3.44□□□□□ -1.86
CCDC78-203ENST00000423653 KRTAP21-2Q3LI59 83 aa3.31□□□□□ -1.88
CCDC78-203ENST00000423653 PHGR1C9JFL3 82 aa3.26□□□□□ -1.89
CCDC78-203ENST00000423653 NDUFAF8A1L188 74 aa3.05□□□□□ -1.92
CCDC78-203ENST00000423653 KRTAP4-4Q9BYR3 166 aa3.03□□□□□ -1.92
CCDC78-203ENST00000423653 MUC19Q7Z5P9 8384 aa2.9□□□□□ -1.95
CCDC78-203ENST00000423653 A0A0A0MQY5 61 aa2.85□□□□□ -1.95
CCDC78-203ENST00000423653 INE1O15225 51 aa2.69□□□□□ -1.98
CCDC78-203ENST00000423653 PRM1P04553 51 aa2.58□□□□□ -2
CCDC78-203ENST00000423653 KRTAP21-1Q3LI58 79 aa2.5□□□□□ -2.01
CCDC78-203ENST00000423653 H3BS24 57 aa2.43□□□□□ -2.02
CCDC78-203ENST00000423653 MUC16Q8WXI7 14507 aa2.08□□□□□ -2.08
Retrieved 78 of 20,778 RNA–protein pairs in 49.5 ms