RNA–Protein interactions for RNA: ENST00000420820.6

CROCCP3-202, Transcript of ciliary rootlet coiled-coil, rootletin pseudogene 3, humanhuman

BASIC

Gene CROCCP3, Length 1,947 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP3-202ENST00000420820 MACF1Q9UPN3 7388 aaKnown RBP6.58□□□□□ -1.36
CROCCP3-202ENST00000420820 KRTAP4-7Q9BYR0 210 aa6.57□□□□□ -1.36
CROCCP3-202ENST00000420820 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.49□□□□□ -1.37
CROCCP3-202ENST00000420820 SYNE2Q8WXH0 6885 aaKnown RBP6.37□□□□□ -1.39
CROCCP3-202ENST00000420820 INE1O15225 51 aa6.37□□□□□ -1.39
CROCCP3-202ENST00000420820 KRTAP2-3P0C7H8 128 aa6.33□□□□□ -1.4
CROCCP3-202ENST00000420820 KRTAP2-4Q9BYR9 128 aa6.33□□□□□ -1.4
CROCCP3-202ENST00000420820 KRTAP2-1Q9BYU5 128 aa6.33□□□□□ -1.4
CROCCP3-202ENST00000420820 KRTAP19-3Q7Z4W3 81 aa6.32□□□□□ -1.4
CROCCP3-202ENST00000420820 MT1GP13640 62 aa6.29□□□□□ -1.4
CROCCP3-202ENST00000420820 MT1MQ8N339 61 aa6.27□□□□□ -1.41
CROCCP3-202ENST00000420820 MUC12Q9UKN1 5478 aa6.27□□□□□ -1.41
CROCCP3-202ENST00000420820 KRTAP6-3Q3LI67 103 aa6.25□□□□□ -1.41
CROCCP3-202ENST00000420820 KRTAP5-9P26371 169 aa6.25□□□□□ -1.41
CROCCP3-202ENST00000420820 SPRR2FQ96RM1 72 aa6.25□□□□□ -1.41
CROCCP3-202ENST00000420820 KRTAP4-3Q9BYR4 195 aa6.23□□□□□ -1.41
CROCCP3-202ENST00000420820 KRTAP9-7A8MTY7 169 aa6.23□□□□□ -1.41
CROCCP3-202ENST00000420820 LCE5AQ5TCM9 118 aa6.16□□□□□ -1.42
CROCCP3-202ENST00000420820 LOC100996750A0A140TA64 210 aa6.14□□□□□ -1.43
CROCCP3-202ENST00000420820 MDN1Q9NU22 5596 aa6.04□□□□□ -1.44
CROCCP3-202ENST00000420820 LCE1AQ5T7P2 110 aa5.97□□□□□ -1.45
CROCCP3-202ENST00000420820 SPRR2EP22531 72 aa5.94□□□□□ -1.46
CROCCP3-202ENST00000420820 SPRR2BP35325 72 aa5.94□□□□□ -1.46
CROCCP3-202ENST00000420820 SPRR2AP35326 72 aa5.94□□□□□ -1.46
CROCCP3-202ENST00000420820 NEBP20929 6669 aa5.86□□□□□ -1.47
CROCCP3-202ENST00000420820 DSTQ03001 7570 aaKnown RBP5.84□□□□□ -1.47
CROCCP3-202ENST00000420820 SPRR2DP22532 72 aa5.73□□□□□ -1.49
CROCCP3-202ENST00000420820 KRTAP5-5Q701N2 237 aaPredicted RBP5.64□□□□□ -1.51
CROCCP3-202ENST00000420820 MT1AP04731 61 aa5.62□□□□□ -1.51
CROCCP3-202ENST00000420820 KRTAP6-1Q3LI64 71 aa5.62□□□□□ -1.51
CROCCP3-202ENST00000420820 LCE3BQ5TA77 95 aa5.56□□□□□ -1.52
CROCCP3-202ENST00000420820 KRTAP20-1Q3LI63 56 aa5.49□□□□□ -1.53
CROCCP3-202ENST00000420820 KRTAP12-4P60329 112 aa5.44□□□□□ -1.54
CROCCP3-202ENST00000420820 KRTAP4-9Q9BYQ8 210 aa5.39□□□□□ -1.55
CROCCP3-202ENST00000420820 KRTAP2-2Q9BYT5 123 aa5.38□□□□□ -1.55
CROCCP3-202ENST00000420820 SYNE1Q8NF91 8797 aaKnown RBP5.36□□□□□ -1.55
CROCCP3-202ENST00000420820 KRTAP9-4Q9BYQ2 154 aa5.31□□□□□ -1.56
CROCCP3-202ENST00000420820 LCE3DQ9BYE3 92 aa5.23□□□□□ -1.57
CROCCP3-202ENST00000420820 KRTAP5-4Q6L8H1 288 aa5.15□□□□□ -1.58
CROCCP3-202ENST00000420820 LCE3EQ5T5B0 92 aa5.15□□□□□ -1.59
CROCCP3-202ENST00000420820 LCE4AQ5TA78 99 aa5.1□□□□□ -1.59
CROCCP3-202ENST00000420820 KRTAP6-2Q3LI66 62 aa5.07□□□□□ -1.6
CROCCP3-202ENST00000420820 MT3P25713 68 aa5.04□□□□□ -1.6
CROCCP3-202ENST00000420820 MT4P47944 62 aa4.97□□□□□ -1.61
CROCCP3-202ENST00000420820 LCE1DQ5T752 114 aa4.96□□□□□ -1.62
CROCCP3-202ENST00000420820 KRTAP4-6Q9BYQ5 205 aa4.93□□□□□ -1.62
CROCCP3-202ENST00000420820 HMCN1Q96RW7 5635 aa4.89□□□□□ -1.63
CROCCP3-202ENST00000420820 KRTAP20-2Q3LI61 65 aa4.82□□□□□ -1.64
CROCCP3-202ENST00000420820 PRM1P04553 51 aa4.77□□□□□ -1.65
CROCCP3-202ENST00000420820 KRTAP5-2Q701N4 177 aa4.74□□□□□ -1.65
CROCCP3-202ENST00000420820 OBSCNQ5VST9 7968 aa4.69□□□□□ -1.66
CROCCP3-202ENST00000420820 KRTAP5-3Q6L8H2 238 aa4.66□□□□□ -1.66
CROCCP3-202ENST00000420820 GPR98Q8WXG9 6306 aa4.48□□□□□ -1.69
CROCCP3-202ENST00000420820 AHNAK2Q8IVF2 5795 aa4.45□□□□□ -1.7
CROCCP3-202ENST00000420820 LCE1FQ5T754 118 aa4.42□□□□□ -1.7
CROCCP3-202ENST00000420820 LCE1EQ5T753 118 aa4.35□□□□□ -1.71
CROCCP3-202ENST00000420820 KRTAP5-10Q6L8G5 202 aa4.3□□□□□ -1.72
CROCCP3-202ENST00000420820 KRTAP4-11Q9BYQ6 195 aa4.25□□□□□ -1.73
CROCCP3-202ENST00000420820 MUC5ACP98088 5654 aa4.21□□□□□ -1.74
CROCCP3-202ENST00000420820 KRTAP5-8O75690 187 aa4.1□□□□□ -1.75
CROCCP3-202ENST00000420820 KRTAP5-7Q6L8G8 165 aa4.05□□□□□ -1.76
CROCCP3-202ENST00000420820 KRTAP5-1Q6L8H4 278 aa4.04□□□□□ -1.76
CROCCP3-202ENST00000420820 LCE1BQ5T7P3 118 aa4.01□□□□□ -1.77
CROCCP3-202ENST00000420820 KRTAP4-2Q9BYR5 136 aa4.01□□□□□ -1.77
CROCCP3-202ENST00000420820 LCE1CQ5T751 118 aa3.99□□□□□ -1.77
CROCCP3-202ENST00000420820 KRTAP9-9Q9BYP9 154 aa3.94□□□□□ -1.78
CROCCP3-202ENST00000420820 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.8□□□□□ -1.8
CROCCP3-202ENST00000420820 KRTAP21-2Q3LI59 83 aa3.68□□□□□ -1.82
CROCCP3-202ENST00000420820 MUC5BQ9HC84 5762 aaPredicted RBP3.59□□□□□ -1.83
CROCCP3-202ENST00000420820 AHNAKQ09666 5890 aaKnown RBP3.48□□□□□ -1.85
CROCCP3-202ENST00000420820 KRTAP5-11Q6L8G4 156 aa3.47□□□□□ -1.85
CROCCP3-202ENST00000420820 KRTAP4-12Q9BQ66 201 aa3.29□□□□□ -1.88
CROCCP3-202ENST00000420820 KRTAP4-4Q9BYR3 166 aa3.23□□□□□ -1.89
CROCCP3-202ENST00000420820 KRTAP21-1Q3LI58 79 aa3.03□□□□□ -1.92
CROCCP3-202ENST00000420820 PHGR1C9JFL3 82 aa2.99□□□□□ -1.93
CROCCP3-202ENST00000420820 MUC19Q7Z5P9 8384 aa2.85□□□□□ -1.95
CROCCP3-202ENST00000420820 MUC16Q8WXI7 14507 aa2.02□□□□□ -2.09
Retrieved 77 of 20,778 RNA–protein pairs in 75.6 ms