RNA–Protein interactions for RNA: ENST00000420692.6

CTSB-203, Transcript of cathepsin B, humanhuman

TSL 2

Gene CTSB, Length 2,230 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-203ENST00000420692 MUC12Q9UKN1 5478 aa5.49□□□□□ -1.53
CTSB-203ENST00000420692 CRCT1Q9UGL9 99 aa5.43□□□□□ -1.54
CTSB-203ENST00000420692 KRTAP4-3Q9BYR4 195 aa5.41□□□□□ -1.54
CTSB-203ENST00000420692 KRTAP2-3P0C7H8 128 aa5.4□□□□□ -1.55
CTSB-203ENST00000420692 KRTAP2-4Q9BYR9 128 aa5.4□□□□□ -1.55
CTSB-203ENST00000420692 KRTAP2-1Q9BYU5 128 aa5.4□□□□□ -1.55
CTSB-203ENST00000420692 INE1O15225 51 aa5.36□□□□□ -1.55
CTSB-203ENST00000420692 KRTAP9-6A0A140TA67 174 aa5.35□□□□□ -1.55
CTSB-203ENST00000420692 KRTAP19-3Q7Z4W3 81 aa5.35□□□□□ -1.55
CTSB-203ENST00000420692 MT1MQ8N339 61 aa5.33□□□□□ -1.56
CTSB-203ENST00000420692 LOC100996750A0A140TA64 210 aa5.33□□□□□ -1.56
CTSB-203ENST00000420692 MT1GP13640 62 aa5.31□□□□□ -1.56
CTSB-203ENST00000420692 MACF1Q9UPN3 7388 aaKnown RBP5.27□□□□□ -1.57
CTSB-203ENST00000420692 SPRR2FQ96RM1 72 aa5.23□□□□□ -1.57
CTSB-203ENST00000420692 LCE5AQ5TCM9 118 aa5.22□□□□□ -1.57
CTSB-203ENST00000420692 DSTQ03001 7570 aaKnown RBP5.15□□□□□ -1.59
CTSB-203ENST00000420692 SYNE2Q8WXH0 6885 aaKnown RBP5.11□□□□□ -1.59
CTSB-203ENST00000420692 MDN1Q9NU22 5596 aa5.07□□□□□ -1.6
CTSB-203ENST00000420692 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.04□□□□□ -1.6
CTSB-203ENST00000420692 KRTAP5-9P26371 169 aa4.98□□□□□ -1.61
CTSB-203ENST00000420692 LCE1AQ5T7P2 110 aa4.95□□□□□ -1.62
CTSB-203ENST00000420692 KRTAP9-7A8MTY7 169 aa4.86□□□□□ -1.63
CTSB-203ENST00000420692 KRTAP6-1Q3LI64 71 aa4.82□□□□□ -1.64
CTSB-203ENST00000420692 KRTAP6-3Q3LI67 103 aa4.82□□□□□ -1.64
CTSB-203ENST00000420692 SPRR2EP22531 72 aa4.8□□□□□ -1.64
CTSB-203ENST00000420692 SPRR2BP35325 72 aa4.8□□□□□ -1.64
CTSB-203ENST00000420692 SPRR2AP35326 72 aa4.8□□□□□ -1.64
CTSB-203ENST00000420692 LCE3BQ5TA77 95 aa4.79□□□□□ -1.64
CTSB-203ENST00000420692 KRTAP5-5Q701N2 237 aaPredicted RBP4.77□□□□□ -1.65
CTSB-203ENST00000420692 MT1AP04731 61 aa4.75□□□□□ -1.65
CTSB-203ENST00000420692 KRTAP4-9Q9BYQ8 210 aa4.72□□□□□ -1.65
CTSB-203ENST00000420692 SYNE1Q8NF91 8797 aaKnown RBP4.69□□□□□ -1.66
CTSB-203ENST00000420692 KRTAP12-4P60329 112 aa4.68□□□□□ -1.66
CTSB-203ENST00000420692 SPRR2DP22532 72 aa4.59□□□□□ -1.67
CTSB-203ENST00000420692 NEBP20929 6669 aa4.53□□□□□ -1.68
CTSB-203ENST00000420692 KRTAP9-4Q9BYQ2 154 aa4.5□□□□□ -1.69
CTSB-203ENST00000420692 LCE3DQ9BYE3 92 aa4.46□□□□□ -1.7
CTSB-203ENST00000420692 LCE3EQ5T5B0 92 aa4.38□□□□□ -1.71
CTSB-203ENST00000420692 KRTAP6-2Q3LI66 62 aa4.34□□□□□ -1.72
CTSB-203ENST00000420692 KRTAP5-4Q6L8H1 288 aa4.29□□□□□ -1.72
CTSB-203ENST00000420692 KRTAP20-1Q3LI63 56 aa4.27□□□□□ -1.73
CTSB-203ENST00000420692 MT3P25713 68 aa4.25□□□□□ -1.73
CTSB-203ENST00000420692 OBSCNQ5VST9 7968 aa4.17□□□□□ -1.74
CTSB-203ENST00000420692 KRTAP2-2Q9BYT5 123 aa4.17□□□□□ -1.74
CTSB-203ENST00000420692 KRTAP4-6Q9BYQ5 205 aa4.13□□□□□ -1.75
CTSB-203ENST00000420692 PRM1P04553 51 aa4.11□□□□□ -1.75
CTSB-203ENST00000420692 MT4P47944 62 aa4.06□□□□□ -1.76
CTSB-203ENST00000420692 KRTAP20-2Q3LI61 65 aa4.01□□□□□ -1.77
CTSB-203ENST00000420692 LCE4AQ5TA78 99 aa4□□□□□ -1.77
CTSB-203ENST00000420692 KRTAP5-2Q701N4 177 aa3.98□□□□□ -1.77
CTSB-203ENST00000420692 HMCN1Q96RW7 5635 aa3.98□□□□□ -1.77
CTSB-203ENST00000420692 GPR98Q8WXG9 6306 aa3.89□□□□□ -1.79
CTSB-203ENST00000420692 LCE1DQ5T752 114 aa3.88□□□□□ -1.79
CTSB-203ENST00000420692 KRTAP5-3Q6L8H2 238 aa3.86□□□□□ -1.79
CTSB-203ENST00000420692 MUC5ACP98088 5654 aa3.66□□□□□ -1.82
CTSB-203ENST00000420692 LCE1EQ5T753 118 aa3.55□□□□□ -1.84
CTSB-203ENST00000420692 LCE1BQ5T7P3 118 aa3.45□□□□□ -1.86
CTSB-203ENST00000420692 AHNAK2Q8IVF2 5795 aa3.44□□□□□ -1.86
CTSB-203ENST00000420692 KRTAP5-1Q6L8H4 278 aa3.41□□□□□ -1.86
CTSB-203ENST00000420692 KRTAP5-10Q6L8G5 202 aa3.4□□□□□ -1.86
CTSB-203ENST00000420692 KRTAP4-2Q9BYR5 136 aa3.4□□□□□ -1.86
CTSB-203ENST00000420692 LCE1CQ5T751 118 aa3.35□□□□□ -1.87
CTSB-203ENST00000420692 KRTAP4-11Q9BYQ6 195 aa3.34□□□□□ -1.87
CTSB-203ENST00000420692 KRTAP4-12Q9BQ66 201 aa3.27□□□□□ -1.89
CTSB-203ENST00000420692 KRTAP5-8O75690 187 aa3.23□□□□□ -1.89
CTSB-203ENST00000420692 MUC5BQ9HC84 5762 aaPredicted RBP3.22□□□□□ -1.89
CTSB-203ENST00000420692 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.17□□□□□ -1.9
CTSB-203ENST00000420692 KRTAP5-7Q6L8G8 165 aa3.16□□□□□ -1.9
CTSB-203ENST00000420692 KRTAP21-2Q3LI59 83 aa3.14□□□□□ -1.91
CTSB-203ENST00000420692 AHNAKQ09666 5890 aaKnown RBP3.13□□□□□ -1.91
CTSB-203ENST00000420692 KRTAP9-9Q9BYP9 154 aa3.05□□□□□ -1.92
CTSB-203ENST00000420692 LCE1FQ5T754 118 aa2.97□□□□□ -1.93
CTSB-203ENST00000420692 KRTAP5-11Q6L8G4 156 aa2.9□□□□□ -1.95
CTSB-203ENST00000420692 KRTAP4-4Q9BYR3 166 aa2.84□□□□□ -1.95
CTSB-203ENST00000420692 KRTAP21-1Q3LI58 79 aa2.59□□□□□ -1.99
CTSB-203ENST00000420692 MUC19Q7Z5P9 8384 aa2.58□□□□□ -2
CTSB-203ENST00000420692 PHGR1C9JFL3 82 aa2.52□□□□□ -2.01
CTSB-203ENST00000420692 MUC16Q8WXI7 14507 aa1.66□□□□□ -2.14
Retrieved 78 of 20,778 RNA–protein pairs in 12.7 ms