RNA–Protein interactions for RNA: ENST00000420539.1

PTP4A1P1-201, Transcript of protein tyrosine phosphatase type IVA, member 1 pseudogene 1, humanhuman

BASIC

Gene PTP4A1P1, Length 515 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1P1-201ENST00000420539 SRCAPQ6ZRS2 3230 aa0.43□□□□□ -2.34
PTP4A1P1-201ENST00000420539 EP400Q96L91 3159 aa0.43□□□□□ -2.34
PTP4A1P1-201ENST00000420539 MDN1Q9NU22 5596 aa0.43□□□□□ -2.34
PTP4A1P1-201ENST00000420539 MYO9AB2RTY4 2548 aa0.42□□□□□ -2.34
PTP4A1P1-201ENST00000420539 SMG1Q96Q15 3661 aaKnown RBP0.42□□□□□ -2.34
PTP4A1P1-201ENST00000420539 SZT2Q5T011 3432 aa0.42□□□□□ -2.34
PTP4A1P1-201ENST00000420539 SPRR2GQ9BYE4 73 aa0.42□□□□□ -2.34
PTP4A1P1-201ENST00000420539 DNAH17Q9UFH2 4485 aa0.42□□□□□ -2.34
PTP4A1P1-201ENST00000420539 GOLGB1Q14789 3259 aaKnown RBP0.41□□□□□ -2.34
PTP4A1P1-201ENST00000420539 MUC5ACP98088 5654 aa0.41□□□□□ -2.34
PTP4A1P1-201ENST00000420539 MT1EP04732 61 aa0.41□□□□□ -2.34
PTP4A1P1-201ENST00000420539 SPEGQ15772 3267 aa0.4□□□□□ -2.34
PTP4A1P1-201ENST00000420539 DMDP11532 3685 aa0.4□□□□□ -2.35
PTP4A1P1-201ENST00000420539 MT1LQ93083 61 aa0.4□□□□□ -2.35
PTP4A1P1-201ENST00000420539 TRRAPQ9Y4A5 3859 aa0.4□□□□□ -2.35
PTP4A1P1-201ENST00000420539 CSMD2Q7Z408 3487 aa0.39□□□□□ -2.35
PTP4A1P1-201ENST00000420539 LOC400499M0QZD8 3231 aa0.38□□□□□ -2.35
PTP4A1P1-201ENST00000420539 MT1HP80294 61 aa0.38□□□□□ -2.35
PTP4A1P1-201ENST00000420539 XIRP2A4UGR9 3374 aa0.38□□□□□ -2.35
PTP4A1P1-201ENST00000420539 UTRNP46939 3433 aa0.38□□□□□ -2.35
PTP4A1P1-201ENST00000420539 MUC3AQ02505 3323 aa0.37□□□□□ -2.35
PTP4A1P1-201ENST00000420539 DNAH5Q8TE73 4624 aa0.37□□□□□ -2.35
PTP4A1P1-201ENST00000420539 EYSQ5T1H1 3165 aa0.36□□□□□ -2.35
PTP4A1P1-201ENST00000420539 MT1XP80297 61 aa0.36□□□□□ -2.35
PTP4A1P1-201ENST00000420539 MUC17Q685J3 4493 aa0.36□□□□□ -2.35
PTP4A1P1-201ENST00000420539 ASPMQ8IZT6 3477 aa0.36□□□□□ -2.35
PTP4A1P1-201ENST00000420539 VCANP13611 3396 aa0.36□□□□□ -2.35
PTP4A1P1-201ENST00000420539 USP34Q70CQ2 3546 aa0.35□□□□□ -2.35
PTP4A1P1-201ENST00000420539 MT1GP13640 62 aa0.35□□□□□ -2.35
PTP4A1P1-201ENST00000420539 KRTAP19-8Q3LI54 63 aa0.35□□□□□ -2.35
PTP4A1P1-201ENST00000420539 PCNTO95613 3336 aa0.32□□□□□ -2.36
PTP4A1P1-201ENST00000420539 VPS13CQ709C8 3753 aa0.32□□□□□ -2.36
PTP4A1P1-201ENST00000420539 CENPFP49454 3210 aa0.32□□□□□ -2.36
PTP4A1P1-201ENST00000420539 MYO15AQ9UKN7 3530 aa0.31□□□□□ -2.36
PTP4A1P1-201ENST00000420539 KMT2DO14686 5537 aa0.3□□□□□ -2.36
PTP4A1P1-201ENST00000420539 MT2AP02795 61 aa0.3□□□□□ -2.36
PTP4A1P1-201ENST00000420539 KRTAP19-7Q3SYF9 63 aa0.3□□□□□ -2.36
PTP4A1P1-201ENST00000420539 PCLOQ9Y6V0 5065 aa0.3□□□□□ -2.36
PTP4A1P1-201ENST00000420539 BRCA2P51587 3418 aa0.3□□□□□ -2.36
PTP4A1P1-201ENST00000420539 SSPOA2VEC9 5147 aa0.3□□□□□ -2.36
PTP4A1P1-201ENST00000420539 UNC80Q8N2C7 3258 aa0.3□□□□□ -2.36
PTP4A1P1-201ENST00000420539 MT1BP07438 61 aa0.29□□□□□ -2.36
PTP4A1P1-201ENST00000420539 MT1MQ8N339 61 aa0.29□□□□□ -2.36
PTP4A1P1-201ENST00000420539 DNAH14Q0VDD8 3507 aa0.29□□□□□ -2.36
PTP4A1P1-201ENST00000420539 MT1HL1P0DM35 61 aa0.28□□□□□ -2.36
PTP4A1P1-201ENST00000420539 KRTAP6-1Q3LI64 71 aa0.28□□□□□ -2.36
PTP4A1P1-201ENST00000420539 WDFY3Q8IZQ1 3526 aa0.27□□□□□ -2.37
PTP4A1P1-201ENST00000420539 STARD9Q9P2P6 4700 aa0.25□□□□□ -2.37
PTP4A1P1-201ENST00000420539 MT1FP04733 61 aa0.25□□□□□ -2.37
PTP4A1P1-201ENST00000420539 KRTAP19-2Q3LHN2 52 aa0.25□□□□□ -2.37
PTP4A1P1-201ENST00000420539 KMT2CQ8NEZ4 4911 aaKnown RBP0.25□□□□□ -2.37
PTP4A1P1-201ENST00000420539 CDH23Q9H251 3354 aa0.2□□□□□ -2.38
PTP4A1P1-201ENST00000420539 USH2AO75445 5202 aa0.2□□□□□ -2.38
PTP4A1P1-201ENST00000420539 GPR98Q8WXG9 6306 aa0.2□□□□□ -2.38
PTP4A1P1-201ENST00000420539 MUC2Q02817 5179 aa0.18□□□□□ -2.38
PTP4A1P1-201ENST00000420539 KRTAP20-2Q3LI61 65 aa0.15□□□□□ -2.39
PTP4A1P1-201ENST00000420539 MT4P47944 62 aa0.14□□□□□ -2.39
PTP4A1P1-201ENST00000420539 UBR4Q5T4S7 5183 aa0.13□□□□□ -2.39
PTP4A1P1-201ENST00000420539 DNHD1Q96M86 4753 aa0.13□□□□□ -2.39
PTP4A1P1-201ENST00000420539 SYNE2Q8WXH0 6885 aaKnown RBP0.11□□□□□ -2.39
PTP4A1P1-201ENST00000420539 FSIP2Q5CZC0 6907 aa0.1□□□□□ -2.39
PTP4A1P1-201ENST00000420539 HYDINQ4G0P3 5121 aa0.09□□□□□ -2.4
PTP4A1P1-201ENST00000420539 RYR1P21817 5038 aa0.08□□□□□ -2.4
PTP4A1P1-201ENST00000420539 MUC12Q9UKN1 5478 aa0.06□□□□□ -2.4
PTP4A1P1-201ENST00000420539 RYR3Q15413 4870 aa0.06□□□□□ -2.4
PTP4A1P1-201ENST00000420539 RNF213Q63HN8 5207 aa0.05□□□□□ -2.4
PTP4A1P1-201ENST00000420539 KRTAP19-6Q3LI70 58 aa0.05□□□□□ -2.4
PTP4A1P1-201ENST00000420539 HERC2O95714 4834 aa0.04□□□□□ -2.4
PTP4A1P1-201ENST00000420539 BIRC6Q9NR09 4857 aa0.03□□□□□ -2.41
PTP4A1P1-201ENST00000420539 DSTQ03001 7570 aaKnown RBP0.01□□□□□ -2.41
PTP4A1P1-201ENST00000420539 KIAA1109Q2LD37 5005 aa-0.01□□□□□ -2.41
PTP4A1P1-201ENST00000420539 KRTAP20-1Q3LI63 56 aa-0.02□□□□□ -2.41
PTP4A1P1-201ENST00000420539 EPPK1P58107 5090 aaKnown RBP-0.02□□□□□ -2.41
PTP4A1P1-201ENST00000420539 MACF1Q9UPN3 7388 aaKnown RBP-0.04□□□□□ -2.42
PTP4A1P1-201ENST00000420539 RYR2Q92736 4967 aa-0.04□□□□□ -2.42
PTP4A1P1-201ENST00000420539 ABCA13Q86UQ4 5058 aa-0.05□□□□□ -2.42
PTP4A1P1-201ENST00000420539 NEBP20929 6669 aa-0.14□□□□□ -2.43
Retrieved 77 of 20,778 RNA–protein pairs in 73.7 ms