RNA–Protein interactions for RNA: ENST00000419810.6

HPCAL1-203, Transcript of hippocalcin like 1, humanhuman

TSL 1 (best)

Gene HPCAL1, Length 4,781 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPCAL1-203ENST00000419810 LCE2DQ5TA82 110 aaPredicted RBP4.36□□□□□ -1.71
HPCAL1-203ENST00000419810 MT1LQ93083 61 aa4.36□□□□□ -1.71
HPCAL1-203ENST00000419810 LCE3EQ5T5B0 92 aa4.35□□□□□ -1.71
HPCAL1-203ENST00000419810 SPRR2DP22532 72 aa4.34□□□□□ -1.71
HPCAL1-203ENST00000419810 FLGP20930 4061 aaPredicted RBP4.33□□□□□ -1.72
HPCAL1-203ENST00000419810 MT1EP04732 61 aa4.29□□□□□ -1.72
HPCAL1-203ENST00000419810 KRTAP19-3Q7Z4W3 81 aa4.26□□□□□ -1.73
HPCAL1-203ENST00000419810 SYNE1Q8NF91 8797 aaKnown RBP4.24□□□□□ -1.73
HPCAL1-203ENST00000419810 KRTAP9-7A8MTY7 169 aa4.24□□□□□ -1.73
HPCAL1-203ENST00000419810 KRTAP19-6Q3LI70 58 aa4.22□□□□□ -1.73
HPCAL1-203ENST00000419810 SYNE2Q8WXH0 6885 aaKnown RBP4.17□□□□□ -1.74
HPCAL1-203ENST00000419810 KRTAP2-3P0C7H8 128 aa4.13□□□□□ -1.75
HPCAL1-203ENST00000419810 KRTAP2-4Q9BYR9 128 aa4.13□□□□□ -1.75
HPCAL1-203ENST00000419810 KRTAP2-1Q9BYU5 128 aa4.13□□□□□ -1.75
HPCAL1-203ENST00000419810 MT1MQ8N339 61 aa4.12□□□□□ -1.75
HPCAL1-203ENST00000419810 PRM1P04553 51 aa4.09□□□□□ -1.75
HPCAL1-203ENST00000419810 LOC100996750A0A140TA64 210 aa4.09□□□□□ -1.76
HPCAL1-203ENST00000419810 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.09□□□□□ -1.76
HPCAL1-203ENST00000419810 KRTAP19-7Q3SYF9 63 aa4.07□□□□□ -1.76
HPCAL1-203ENST00000419810 KRTAP4-3Q9BYR4 195 aa4.02□□□□□ -1.77
HPCAL1-203ENST00000419810 KMT2DO14686 5537 aa4□□□□□ -1.77
HPCAL1-203ENST00000419810 USH2AO75445 5202 aa3.97□□□□□ -1.77
HPCAL1-203ENST00000419810 MT3P25713 68 aa3.96□□□□□ -1.78
HPCAL1-203ENST00000419810 KRTAP20-1Q3LI63 56 aa3.96□□□□□ -1.78
HPCAL1-203ENST00000419810 OBSCNQ5VST9 7968 aa3.94□□□□□ -1.78
HPCAL1-203ENST00000419810 KRTAP6-3Q3LI67 103 aa3.94□□□□□ -1.78
HPCAL1-203ENST00000419810 KRTAP9-6A8MVA2 160 aa3.93□□□□□ -1.78
HPCAL1-203ENST00000419810 MT4P47944 62 aa3.92□□□□□ -1.78
HPCAL1-203ENST00000419810 DSTQ03001 7570 aaKnown RBP3.89□□□□□ -1.79
HPCAL1-203ENST00000419810 MT1AP04731 61 aa3.86□□□□□ -1.79
HPCAL1-203ENST00000419810 KRTAP4-9Q9BYQ8 210 aa3.85□□□□□ -1.79
HPCAL1-203ENST00000419810 MACF1Q9UPN3 7388 aaKnown RBP3.84□□□□□ -1.79
HPCAL1-203ENST00000419810 FCGBPQ9Y6R7 5405 aaPredicted RBP3.79□□□□□ -1.8
HPCAL1-203ENST00000419810 SSPOA2VEC9 5147 aa3.71□□□□□ -1.81
HPCAL1-203ENST00000419810 KRTAP2-2Q9BYT5 123 aa3.68□□□□□ -1.82
HPCAL1-203ENST00000419810 LCE1AQ5T7P2 110 aa3.68□□□□□ -1.82
HPCAL1-203ENST00000419810 KRTAP6-1Q3LI64 71 aa3.65□□□□□ -1.83
HPCAL1-203ENST00000419810 KRTAP6-2Q3LI66 62 aa3.64□□□□□ -1.83
HPCAL1-203ENST00000419810 MDN1Q9NU22 5596 aa3.64□□□□□ -1.83
HPCAL1-203ENST00000419810 LCE1DQ5T752 114 aa3.61□□□□□ -1.83
HPCAL1-203ENST00000419810 LCE1BQ5T7P3 118 aa3.61□□□□□ -1.83
HPCAL1-203ENST00000419810 LCE5AQ5TCM9 118 aa3.59□□□□□ -1.84
HPCAL1-203ENST00000419810 NEBP20929 6669 aa3.58□□□□□ -1.84
HPCAL1-203ENST00000419810 MUC12Q9UKN1 5478 aa3.57□□□□□ -1.84
HPCAL1-203ENST00000419810 KRTAP9-4Q9BYQ2 154 aa3.54□□□□□ -1.84
HPCAL1-203ENST00000419810 GPR98Q8WXG9 6306 aa3.43□□□□□ -1.86
HPCAL1-203ENST00000419810 LCE4AQ5TA78 99 aa3.42□□□□□ -1.86
HPCAL1-203ENST00000419810 KRTAP5-9P26371 169 aa3.41□□□□□ -1.86
HPCAL1-203ENST00000419810 KRTAP4-6Q9BYQ5 205 aa3.15□□□□□ -1.91
HPCAL1-203ENST00000419810 MUC19Q7Z5P9 8384 aa3.01□□□□□ -1.93
HPCAL1-203ENST00000419810 KRTAP5-5Q701N2 237 aaPredicted RBP3.01□□□□□ -1.93
HPCAL1-203ENST00000419810 KRTAP9-9Q9BYP9 154 aa3□□□□□ -1.93
HPCAL1-203ENST00000419810 KRTAP4-11Q9BYQ6 195 aa3□□□□□ -1.93
HPCAL1-203ENST00000419810 KRTAP20-2Q3LI61 65 aa2.99□□□□□ -1.93
HPCAL1-203ENST00000419810 LCE1CQ5T751 118 aa2.98□□□□□ -1.93
HPCAL1-203ENST00000419810 LCE1EQ5T753 118 aa2.98□□□□□ -1.93
HPCAL1-203ENST00000419810 LCE1FQ5T754 118 aa2.98□□□□□ -1.93
HPCAL1-203ENST00000419810 KRTAP5-4Q6L8H1 288 aa2.79□□□□□ -1.96
HPCAL1-203ENST00000419810 KRTAP5-3Q6L8H2 238 aa2.76□□□□□ -1.97
HPCAL1-203ENST00000419810 MUC5ACP98088 5654 aa2.76□□□□□ -1.97
HPCAL1-203ENST00000419810 HMCN1Q96RW7 5635 aa2.72□□□□□ -1.97
HPCAL1-203ENST00000419810 AHNAK2Q8IVF2 5795 aa2.68□□□□□ -1.98
HPCAL1-203ENST00000419810 KRTAP4-12Q9BQ66 201 aa2.61□□□□□ -1.99
HPCAL1-203ENST00000419810 KRTAP4-2Q9BYR5 136 aa2.61□□□□□ -1.99
HPCAL1-203ENST00000419810 KRTAP4-4Q9BYR3 166 aa2.58□□□□□ -2
HPCAL1-203ENST00000419810 KRTAP5-8O75690 187 aa2.48□□□□□ -2.01
HPCAL1-203ENST00000419810 KRTAP5-10Q6L8G5 202 aa2.33□□□□□ -2.04
HPCAL1-203ENST00000419810 AHNAKQ09666 5890 aaKnown RBP2.29□□□□□ -2.04
HPCAL1-203ENST00000419810 KRTAP5-2Q701N4 177 aa2.25□□□□□ -2.05
HPCAL1-203ENST00000419810 MUC5BQ9HC84 5762 aaPredicted RBP2.15□□□□□ -2.06
HPCAL1-203ENST00000419810 KRTAP5-7Q6L8G8 165 aa2.13□□□□□ -2.07
HPCAL1-203ENST00000419810 KRTAP5-1Q6L8H4 278 aa2.08□□□□□ -2.08
HPCAL1-203ENST00000419810 PHGR1C9JFL3 82 aa2.07□□□□□ -2.08
HPCAL1-203ENST00000419810 KRTAP21-2Q3LI59 83 aa1.94□□□□□ -2.1
HPCAL1-203ENST00000419810 KRTAP21-1Q3LI58 79 aa1.94□□□□□ -2.1
HPCAL1-203ENST00000419810 KRTAP5-11Q6L8G4 156 aa1.93□□□□□ -2.1
HPCAL1-203ENST00000419810 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.81□□□□□ -2.12
HPCAL1-203ENST00000419810 MUC16Q8WXI7 14507 aa1.21□□□□□ -2.22
Retrieved 78 of 20,778 RNA–protein pairs in 30 ms