RNA–Protein interactions for RNA: ENST00000419499.1

LINC00402-201, long intergenic non-protein coding RNA 402, humanhuman

TSL 2 BASIC

Gene LINC00402, Length 3,340 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00402-201ENST00000419499 MACF1Q9UPN3 7388 aaKnown RBP3.35□□□□□ -1.87
LINC00402-201ENST00000419499 KRTAP19-3Q7Z4W3 81 aa3.31□□□□□ -1.88
LINC00402-201ENST00000419499 MT1MQ8N339 61 aa3.29□□□□□ -1.88
LINC00402-201ENST00000419499 LCE5AQ5TCM9 118 aa3.27□□□□□ -1.89
LINC00402-201ENST00000419499 MT1GP13640 62 aa3.27□□□□□ -1.89
LINC00402-201ENST00000419499 CRCT1Q9UGL9 99 aa3.26□□□□□ -1.89
LINC00402-201ENST00000419499 KRTAP5-9P26371 169 aa3.24□□□□□ -1.89
LINC00402-201ENST00000419499 KRTAP4-3Q9BYR4 195 aa3.24□□□□□ -1.89
LINC00402-201ENST00000419499 SPRR2FQ96RM1 72 aa3.22□□□□□ -1.89
LINC00402-201ENST00000419499 SYNE2Q8WXH0 6885 aaKnown RBP3.22□□□□□ -1.89
LINC00402-201ENST00000419499 KRTAP2-3P0C7H8 128 aa3.22□□□□□ -1.89
LINC00402-201ENST00000419499 KRTAP2-4Q9BYR9 128 aa3.22□□□□□ -1.89
LINC00402-201ENST00000419499 KRTAP2-1Q9BYU5 128 aa3.22□□□□□ -1.89
LINC00402-201ENST00000419499 MDN1Q9NU22 5596 aa3.19□□□□□ -1.9
LINC00402-201ENST00000419499 LOC100996750A0A140TA64 210 aa3.18□□□□□ -1.9
LINC00402-201ENST00000419499 KRTAP4-6Q9BYQ5 205 aa3.15□□□□□ -1.91
LINC00402-201ENST00000419499 LCE1AQ5T7P2 110 aa3.14□□□□□ -1.91
LINC00402-201ENST00000419499 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.04□□□□□ -1.92
LINC00402-201ENST00000419499 DSTQ03001 7570 aaKnown RBP3.04□□□□□ -1.92
LINC00402-201ENST00000419499 KRTAP9-6A0A140TA67 174 aa3.03□□□□□ -1.92
LINC00402-201ENST00000419499 INE1O15225 51 aa3.03□□□□□ -1.92
LINC00402-201ENST00000419499 KRTAP5-5Q701N2 237 aaPredicted RBP3.03□□□□□ -1.92
LINC00402-201ENST00000419499 KRTAP6-3Q3LI67 103 aa3.03□□□□□ -1.93
LINC00402-201ENST00000419499 SPRR2EP22531 72 aa3.01□□□□□ -1.93
LINC00402-201ENST00000419499 SPRR2BP35325 72 aa3.01□□□□□ -1.93
LINC00402-201ENST00000419499 SPRR2AP35326 72 aa3.01□□□□□ -1.93
LINC00402-201ENST00000419499 MT1AP04731 61 aa2.93□□□□□ -1.94
LINC00402-201ENST00000419499 KRTAP6-1Q3LI64 71 aa2.92□□□□□ -1.94
LINC00402-201ENST00000419499 SPRR2DP22532 72 aa2.89□□□□□ -1.95
LINC00402-201ENST00000419499 NEBP20929 6669 aa2.85□□□□□ -1.95
LINC00402-201ENST00000419499 LCE3BQ5TA77 95 aa2.83□□□□□ -1.96
LINC00402-201ENST00000419499 KRTAP5-4Q6L8H1 288 aa2.78□□□□□ -1.97
LINC00402-201ENST00000419499 KRTAP9-7A8MTY7 169 aa2.77□□□□□ -1.97
LINC00402-201ENST00000419499 KRTAP9-4Q9BYQ2 154 aa2.76□□□□□ -1.97
LINC00402-201ENST00000419499 SYNE1Q8NF91 8797 aaKnown RBP2.75□□□□□ -1.97
LINC00402-201ENST00000419499 KRTAP4-9Q9BYQ8 210 aa2.74□□□□□ -1.97
LINC00402-201ENST00000419499 KRTAP4-12Q9BQ66 201 aa2.73□□□□□ -1.97
LINC00402-201ENST00000419499 KRTAP12-4P60329 112 aa2.67□□□□□ -1.98
LINC00402-201ENST00000419499 KRTAP9-9Q9BYP9 154 aa2.66□□□□□ -1.98
LINC00402-201ENST00000419499 KRTAP6-2Q3LI66 62 aa2.63□□□□□ -1.99
LINC00402-201ENST00000419499 LCE3DQ9BYE3 92 aa2.62□□□□□ -1.99
LINC00402-201ENST00000419499 MT3P25713 68 aa2.59□□□□□ -2
LINC00402-201ENST00000419499 LCE4AQ5TA78 99 aa2.58□□□□□ -2
LINC00402-201ENST00000419499 KRTAP5-2Q701N4 177 aa2.57□□□□□ -2
LINC00402-201ENST00000419499 LCE3EQ5T5B0 92 aa2.57□□□□□ -2
LINC00402-201ENST00000419499 LCE1DQ5T752 114 aa2.55□□□□□ -2
LINC00402-201ENST00000419499 KRTAP20-2Q3LI61 65 aa2.54□□□□□ -2
LINC00402-201ENST00000419499 HMCN1Q96RW7 5635 aa2.54□□□□□ -2
LINC00402-201ENST00000419499 KRTAP2-2Q9BYT5 123 aa2.52□□□□□ -2.01
LINC00402-201ENST00000419499 MT4P47944 62 aa2.5□□□□□ -2.01
LINC00402-201ENST00000419499 KRTAP5-3Q6L8H2 238 aa2.48□□□□□ -2.01
LINC00402-201ENST00000419499 KRTAP20-1Q3LI63 56 aa2.47□□□□□ -2.01
LINC00402-201ENST00000419499 KRTAP4-2Q9BYR5 136 aa2.43□□□□□ -2.02
LINC00402-201ENST00000419499 KRTAP4-11Q9BYQ6 195 aa2.39□□□□□ -2.03
LINC00402-201ENST00000419499 PRM1P04553 51 aa2.35□□□□□ -2.03
LINC00402-201ENST00000419499 OBSCNQ5VST9 7968 aa2.31□□□□□ -2.04
LINC00402-201ENST00000419499 LCE1EQ5T753 118 aa2.26□□□□□ -2.05
LINC00402-201ENST00000419499 MUC5ACP98088 5654 aa2.21□□□□□ -2.06
LINC00402-201ENST00000419499 KRTAP5-10Q6L8G5 202 aa2.2□□□□□ -2.06
LINC00402-201ENST00000419499 MUC5BQ9HC84 5762 aaPredicted RBP2.18□□□□□ -2.06
LINC00402-201ENST00000419499 KRTAP5-1Q6L8H4 278 aa2.18□□□□□ -2.06
LINC00402-201ENST00000419499 AHNAK2Q8IVF2 5795 aa2.13□□□□□ -2.07
LINC00402-201ENST00000419499 LCE1CQ5T751 118 aa2.12□□□□□ -2.07
LINC00402-201ENST00000419499 LCE1BQ5T7P3 118 aa2.12□□□□□ -2.07
LINC00402-201ENST00000419499 KRTAP5-7Q6L8G8 165 aa2.11□□□□□ -2.07
LINC00402-201ENST00000419499 KRTAP5-8O75690 187 aa2.1□□□□□ -2.07
LINC00402-201ENST00000419499 GPR98Q8WXG9 6306 aa2.08□□□□□ -2.08
LINC00402-201ENST00000419499 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.05□□□□□ -2.08
LINC00402-201ENST00000419499 AHNAKQ09666 5890 aaKnown RBP1.97□□□□□ -2.09
LINC00402-201ENST00000419499 KRTAP21-2Q3LI59 83 aa1.94□□□□□ -2.1
LINC00402-201ENST00000419499 KRTAP5-11Q6L8G4 156 aa1.87□□□□□ -2.11
LINC00402-201ENST00000419499 MUC19Q7Z5P9 8384 aa1.82□□□□□ -2.12
LINC00402-201ENST00000419499 LCE1FQ5T754 118 aa1.78□□□□□ -2.12
LINC00402-201ENST00000419499 KRTAP4-4Q9BYR3 166 aa1.64□□□□□ -2.15
LINC00402-201ENST00000419499 PHGR1C9JFL3 82 aa1.6□□□□□ -2.15
LINC00402-201ENST00000419499 KRTAP21-1Q3LI58 79 aa1.53□□□□□ -2.17
LINC00402-201ENST00000419499 MUC16Q8WXI7 14507 aa1.07□□□□□ -2.24
Retrieved 77 of 20,778 RNA–protein pairs in 43.5 ms