RNA–Protein interactions for RNA: ENST00000418800.6

DDR1-232, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS P3 TSL 2 BASIC

Gene DDR1, Length 3,588 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-232ENST00000418800 MACF1Q9UPN3 7388 aaKnown RBP4.01□□□□□ -1.77
DDR1-232ENST00000418800 KRTAP12-4P60329 112 aa3.98□□□□□ -1.77
DDR1-232ENST00000418800 LOC100996750A0A140TA64 210 aa3.96□□□□□ -1.78
DDR1-232ENST00000418800 KRTAP4-3Q9BYR4 195 aa3.93□□□□□ -1.78
DDR1-232ENST00000418800 MT1GP13640 62 aa3.92□□□□□ -1.78
DDR1-232ENST00000418800 MDN1Q9NU22 5596 aa3.91□□□□□ -1.78
DDR1-232ENST00000418800 KRTAP2-3P0C7H8 128 aa3.91□□□□□ -1.78
DDR1-232ENST00000418800 KRTAP2-4Q9BYR9 128 aa3.91□□□□□ -1.78
DDR1-232ENST00000418800 KRTAP2-1Q9BYU5 128 aa3.91□□□□□ -1.78
DDR1-232ENST00000418800 KRTAP19-7Q3SYF9 63 aa3.9□□□□□ -1.78
DDR1-232ENST00000418800 MT1LQ93083 61 aa3.86□□□□□ -1.79
DDR1-232ENST00000418800 KRTAP9-2Q9BYQ4 174 aa3.82□□□□□ -1.8
DDR1-232ENST00000418800 MT1EP04732 61 aa3.8□□□□□ -1.8
DDR1-232ENST00000418800 SPRR2FQ96RM1 72 aa3.8□□□□□ -1.8
DDR1-232ENST00000418800 LCE3BQ5TA77 95 aa3.79□□□□□ -1.8
DDR1-232ENST00000418800 KRTAP19-6Q3LI70 58 aa3.79□□□□□ -1.8
DDR1-232ENST00000418800 KRTAP4-9Q9BYQ8 210 aa3.75□□□□□ -1.81
DDR1-232ENST00000418800 LCE5AQ5TCM9 118 aa3.73□□□□□ -1.81
DDR1-232ENST00000418800 KRTAP9-4Q9BYQ2 154 aa3.7□□□□□ -1.82
DDR1-232ENST00000418800 LCE4AQ5TA78 99 aa3.65□□□□□ -1.82
DDR1-232ENST00000418800 MT1MQ8N339 61 aa3.58□□□□□ -1.84
DDR1-232ENST00000418800 KRTAP9-9Q9BYP9 154 aa3.57□□□□□ -1.84
DDR1-232ENST00000418800 PRM1P04553 51 aa3.57□□□□□ -1.84
DDR1-232ENST00000418800 KRTAP19-3Q7Z4W3 81 aa3.56□□□□□ -1.84
DDR1-232ENST00000418800 KRTAP9-6A0A140TA67 174 aa3.53□□□□□ -1.84
DDR1-232ENST00000418800 KRTAP9-7A8MTY7 169 aa3.53□□□□□ -1.84
DDR1-232ENST00000418800 KRTAP19-4Q3LI73 84 aa3.52□□□□□ -1.85
DDR1-232ENST00000418800 LCE1FQ5T754 118 aa3.51□□□□□ -1.85
DDR1-232ENST00000418800 LCE3DQ9BYE3 92 aa3.51□□□□□ -1.85
DDR1-232ENST00000418800 LCE3EQ5T5B0 92 aa3.45□□□□□ -1.86
DDR1-232ENST00000418800 SPRR2EP22531 72 aa3.45□□□□□ -1.86
DDR1-232ENST00000418800 SPRR2BP35325 72 aa3.45□□□□□ -1.86
DDR1-232ENST00000418800 SPRR2AP35326 72 aa3.45□□□□□ -1.86
DDR1-232ENST00000418800 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.41□□□□□ -1.86
DDR1-232ENST00000418800 KRTAP6-1Q3LI64 71 aa3.37□□□□□ -1.87
DDR1-232ENST00000418800 KRTAP5-9P26371 169 aa3.34□□□□□ -1.88
DDR1-232ENST00000418800 KRTAP2-2Q9BYT5 123 aa3.31□□□□□ -1.88
DDR1-232ENST00000418800 KRTAP6-3Q3LI67 103 aa3.28□□□□□ -1.88
DDR1-232ENST00000418800 LCE1AQ5T7P2 110 aa3.26□□□□□ -1.89
DDR1-232ENST00000418800 SPRR2DP22532 72 aa3.26□□□□□ -1.89
DDR1-232ENST00000418800 KRTAP6-2Q3LI66 62 aa3.25□□□□□ -1.89
DDR1-232ENST00000418800 KRTAP5-5Q701N2 237 aaPredicted RBP3.21□□□□□ -1.9
DDR1-232ENST00000418800 LCE1EQ5T753 118 aa3.21□□□□□ -1.9
DDR1-232ENST00000418800 MT1AP04731 61 aa3.18□□□□□ -1.9
DDR1-232ENST00000418800 MT4P47944 62 aa3.15□□□□□ -1.9
DDR1-232ENST00000418800 MUC19Q7Z5P9 8384 aa3.11□□□□□ -1.91
DDR1-232ENST00000418800 NEBP20929 6669 aa3.11□□□□□ -1.91
DDR1-232ENST00000418800 LCE1DQ5T752 114 aa3.01□□□□□ -1.93
DDR1-232ENST00000418800 MT3P25713 68 aa2.98□□□□□ -1.93
DDR1-232ENST00000418800 KRTAP4-6Q9BYQ5 205 aa2.96□□□□□ -1.94
DDR1-232ENST00000418800 HMCN1Q96RW7 5635 aa2.9□□□□□ -1.95
DDR1-232ENST00000418800 KRTAP20-1Q3LI63 56 aa2.83□□□□□ -1.96
DDR1-232ENST00000418800 KRTAP5-4Q6L8H1 288 aa2.79□□□□□ -1.96
DDR1-232ENST00000418800 LCE1BQ5T7P3 118 aa2.76□□□□□ -1.97
DDR1-232ENST00000418800 MUC5ACP98088 5654 aa2.75□□□□□ -1.97
DDR1-232ENST00000418800 KRTAP4-12Q9BQ66 201 aa2.75□□□□□ -1.97
DDR1-232ENST00000418800 KRTAP4-11Q9BYQ6 195 aa2.74□□□□□ -1.97
DDR1-232ENST00000418800 KRTAP20-2Q3LI61 65 aa2.62□□□□□ -1.99
DDR1-232ENST00000418800 KRTAP5-3Q6L8H2 238 aa2.53□□□□□ -2
DDR1-232ENST00000418800 KRTAP5-2Q701N4 177 aa2.53□□□□□ -2
DDR1-232ENST00000418800 MUC5BQ9HC84 5762 aaPredicted RBP2.49□□□□□ -2.01
DDR1-232ENST00000418800 AHNAK2Q8IVF2 5795 aa2.44□□□□□ -2.02
DDR1-232ENST00000418800 GPR98Q8WXG9 6306 aa2.35□□□□□ -2.03
DDR1-232ENST00000418800 KRTAP4-4Q9BYR3 166 aa2.35□□□□□ -2.03
DDR1-232ENST00000418800 KRTAP4-2Q9BYR5 136 aa2.3□□□□□ -2.04
DDR1-232ENST00000418800 KRTAP5-10Q6L8G5 202 aa2.29□□□□□ -2.04
DDR1-232ENST00000418800 KRTAP5-1Q6L8H4 278 aa2.2□□□□□ -2.06
DDR1-232ENST00000418800 KRTAP5-8O75690 187 aa2.2□□□□□ -2.06
DDR1-232ENST00000418800 KRTAP5-7Q6L8G8 165 aa2.09□□□□□ -2.07
DDR1-232ENST00000418800 LCE1CQ5T751 118 aa2.06□□□□□ -2.08
DDR1-232ENST00000418800 KRTAP21-2Q3LI59 83 aa1.99□□□□□ -2.09
DDR1-232ENST00000418800 KRTAP21-1Q3LI58 79 aa1.95□□□□□ -2.1
DDR1-232ENST00000418800 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.93□□□□□ -2.1
DDR1-232ENST00000418800 AHNAKQ09666 5890 aaKnown RBP1.87□□□□□ -2.11
DDR1-232ENST00000418800 KRTAP5-11Q6L8G4 156 aa1.83□□□□□ -2.12
DDR1-232ENST00000418800 PHGR1C9JFL3 82 aa1.58□□□□□ -2.16
DDR1-232ENST00000418800 MUC16Q8WXI7 14507 aa1.07□□□□□ -2.24
Retrieved 77 of 20,778 RNA–protein pairs in 20 ms