RNA–Protein interactions for RNA: ENST00000418518.2

LINCMD1-201, Transcript of long intergenic non-protein coding RNA, muscle differentiation 1, humanhuman

TSL 5 BASIC

Gene LINCMD1, Length 462 nt, Biotype lincRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINCMD1-201ENST00000418518 MT1LQ93083 61 aa3.22□□□□□ -1.89
LINCMD1-201ENST00000418518 NEBP20929 6669 aa3.15□□□□□ -1.91
LINCMD1-201ENST00000418518 CRCT1Q9UGL9 99 aa3.13□□□□□ -1.91
LINCMD1-201ENST00000418518 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.12□□□□□ -1.91
LINCMD1-201ENST00000418518 KRTAP4-12Q9BQ66 201 aa3.12□□□□□ -1.91
LINCMD1-201ENST00000418518 KRTAP19-3Q7Z4W3 81 aa3.1□□□□□ -1.91
LINCMD1-201ENST00000418518 KRTAP9-6A8MVA2 160 aa3.09□□□□□ -1.91
LINCMD1-201ENST00000418518 MT1GP13640 62 aa3.08□□□□□ -1.92
LINCMD1-201ENST00000418518 LCE3BQ5TA77 95 aa3.08□□□□□ -1.92
LINCMD1-201ENST00000418518 KRTAP4-7Q9BYR0 210 aa3.08□□□□□ -1.92
LINCMD1-201ENST00000418518 MT1MQ8N339 61 aa3.06□□□□□ -1.92
LINCMD1-201ENST00000418518 SPRR2FQ96RM1 72 aa3.05□□□□□ -1.92
LINCMD1-201ENST00000418518 KRTAP5-9P26371 169 aa3.04□□□□□ -1.92
LINCMD1-201ENST00000418518 LCE5AQ5TCM9 118 aa3.04□□□□□ -1.92
LINCMD1-201ENST00000418518 MUC12Q9UKN1 5478 aa3.04□□□□□ -1.92
LINCMD1-201ENST00000418518 SYNE2Q8WXH0 6885 aaKnown RBP3.02□□□□□ -1.93
LINCMD1-201ENST00000418518 LCE4AQ5TA78 99 aa3.01□□□□□ -1.93
LINCMD1-201ENST00000418518 MACF1Q9UPN3 7388 aaKnown RBP2.98□□□□□ -1.93
LINCMD1-201ENST00000418518 KRTAP9-9Q9BYP9 154 aa2.98□□□□□ -1.93
LINCMD1-201ENST00000418518 KRTAP9-4Q9BYQ2 154 aa2.98□□□□□ -1.93
LINCMD1-201ENST00000418518 A0A0A0MQY5 61 aa2.97□□□□□ -1.93
LINCMD1-201ENST00000418518 KRTAP4-3Q9BYR4 195 aa2.96□□□□□ -1.94
LINCMD1-201ENST00000418518 KRTAP2-3P0C7H8 128 aa2.95□□□□□ -1.94
LINCMD1-201ENST00000418518 KRTAP2-4Q9BYR9 128 aa2.95□□□□□ -1.94
LINCMD1-201ENST00000418518 KRTAP2-1Q9BYU5 128 aa2.95□□□□□ -1.94
LINCMD1-201ENST00000418518 LCE1AQ5T7P2 110 aa2.94□□□□□ -1.94
LINCMD1-201ENST00000418518 KRTAP6-3Q3LI67 103 aa2.9□□□□□ -1.95
LINCMD1-201ENST00000418518 MDN1Q9NU22 5596 aa2.86□□□□□ -1.95
LINCMD1-201ENST00000418518 SPRR2EP22531 72 aa2.86□□□□□ -1.95
LINCMD1-201ENST00000418518 SPRR2BP35325 72 aa2.86□□□□□ -1.95
LINCMD1-201ENST00000418518 SPRR2AP35326 72 aa2.86□□□□□ -1.95
LINCMD1-201ENST00000418518 LCE1DQ5T752 114 aa2.85□□□□□ -1.95
LINCMD1-201ENST00000418518 INE1O15225 51 aa2.8□□□□□ -1.96
LINCMD1-201ENST00000418518 KRTAP5-5Q701N2 237 aaPredicted RBP2.78□□□□□ -1.96
LINCMD1-201ENST00000418518 AHNAK2Q8IVF2 5795 aa2.78□□□□□ -1.97
LINCMD1-201ENST00000418518 MT1AP04731 61 aa2.75□□□□□ -1.97
LINCMD1-201ENST00000418518 SPRR2DP22532 72 aa2.75□□□□□ -1.97
LINCMD1-201ENST00000418518 KRTAP20-1Q3LI63 56 aa2.75□□□□□ -1.97
LINCMD1-201ENST00000418518 KRTAP4-9Q9BYQ8 210 aa2.75□□□□□ -1.97
LINCMD1-201ENST00000418518 DSTQ03001 7570 aaKnown RBP2.7□□□□□ -1.98
LINCMD1-201ENST00000418518 KRTAP6-1Q3LI64 71 aa2.7□□□□□ -1.98
LINCMD1-201ENST00000418518 KRTAP4-11Q9BYQ6 195 aa2.68□□□□□ -1.98
LINCMD1-201ENST00000418518 KRTAP4-2Q9BYR5 136 aa2.65□□□□□ -1.99
LINCMD1-201ENST00000418518 SYNE1Q8NF91 8797 aaKnown RBP2.62□□□□□ -1.99
LINCMD1-201ENST00000418518 KRTAP5-4Q6L8H1 288 aa2.59□□□□□ -1.99
LINCMD1-201ENST00000418518 AHNAKQ09666 5890 aaKnown RBP2.58□□□□□ -2
LINCMD1-201ENST00000418518 KRTAP12-4P60329 112 aa2.48□□□□□ -2.01
LINCMD1-201ENST00000418518 MT3P25713 68 aa2.46□□□□□ -2.02
LINCMD1-201ENST00000418518 MUC5BQ9HC84 5762 aaPredicted RBP2.45□□□□□ -2.02
LINCMD1-201ENST00000418518 KRTAP6-2Q3LI66 62 aa2.44□□□□□ -2.02
LINCMD1-201ENST00000418518 LCE3DQ9BYE3 92 aa2.44□□□□□ -2.02
LINCMD1-201ENST00000418518 KRTAP2-2Q9BYT5 123 aa2.44□□□□□ -2.02
LINCMD1-201ENST00000418518 LCE3EQ5T5B0 92 aa2.4□□□□□ -2.03
LINCMD1-201ENST00000418518 KRTAP20-2Q3LI61 65 aa2.39□□□□□ -2.03
LINCMD1-201ENST00000418518 KRTAP5-2Q701N4 177 aa2.39□□□□□ -2.03
LINCMD1-201ENST00000418518 MT4P47944 62 aa2.35□□□□□ -2.03
LINCMD1-201ENST00000418518 HMCN1Q96RW7 5635 aa2.31□□□□□ -2.04
LINCMD1-201ENST00000418518 KRTAP5-3Q6L8H2 238 aa2.31□□□□□ -2.04
LINCMD1-201ENST00000418518 KRTAP5-7Q6L8G8 165 aa2.29□□□□□ -2.04
LINCMD1-201ENST00000418518 KRTAP5-10Q6L8G5 202 aa2.23□□□□□ -2.05
LINCMD1-201ENST00000418518 MUC5ACP98088 5654 aa2.22□□□□□ -2.05
LINCMD1-201ENST00000418518 OBSCNQ5VST9 7968 aa2.22□□□□□ -2.05
LINCMD1-201ENST00000418518 PRM1P04553 51 aa2.15□□□□□ -2.07
LINCMD1-201ENST00000418518 LCE1EQ5T753 118 aa2.13□□□□□ -2.07
LINCMD1-201ENST00000418518 KRTAP5-1Q6L8H4 278 aa2.02□□□□□ -2.09
LINCMD1-201ENST00000418518 LCE1CQ5T751 118 aa1.98□□□□□ -2.09
LINCMD1-201ENST00000418518 LCE1BQ5T7P3 118 aa1.98□□□□□ -2.09
LINCMD1-201ENST00000418518 KRTAP5-8O75690 187 aa1.97□□□□□ -2.09
LINCMD1-201ENST00000418518 LCE1FQ5T754 118 aa1.92□□□□□ -2.1
LINCMD1-201ENST00000418518 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.9□□□□□ -2.11
LINCMD1-201ENST00000418518 KRTAP5-11Q6L8G4 156 aa1.82□□□□□ -2.12
LINCMD1-201ENST00000418518 KRTAP21-2Q3LI59 83 aa1.78□□□□□ -2.12
LINCMD1-201ENST00000418518 KRTAP4-4Q9BYR3 166 aa1.51□□□□□ -2.17
LINCMD1-201ENST00000418518 PHGR1C9JFL3 82 aa1.49□□□□□ -2.17
LINCMD1-201ENST00000418518 KRTAP21-1Q3LI58 79 aa1.37□□□□□ -2.19
LINCMD1-201ENST00000418518 MUC19Q7Z5P9 8384 aa1.3□□□□□ -2.2
LINCMD1-201ENST00000418518 MUC16Q8WXI7 14507 aa1.07□□□□□ -2.24
Retrieved 77 of 20,778 RNA–protein pairs in 36.2 ms