RNA–Protein interactions for RNA: ENST00000417503.1

SSXP9-201, Transcript of SSX family pseudogene 9, humanhuman

BASIC

Gene SSXP9, Length 292 nt, Biotype unprocessed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSXP9-201ENST00000417503 DNAH6Q9C0G6 4158 aa0.63□□□□□ -2.31
SSXP9-201ENST00000417503 HSPG2P98160 4391 aa0.63□□□□□ -2.31
SSXP9-201ENST00000417503 DNAH1Q9P2D7 4330 aa0.63□□□□□ -2.31
SSXP9-201ENST00000417503 FLGP20930 4061 aaPredicted RBP0.63□□□□□ -2.31
SSXP9-201ENST00000417503 DNAH9Q9NYC9 4486 aa0.62□□□□□ -2.31
SSXP9-201ENST00000417503 MT1GP13640 62 aa0.62□□□□□ -2.31
SSXP9-201ENST00000417503 PKD1P98161 4303 aa0.62□□□□□ -2.31
SSXP9-201ENST00000417503 HECTD4Q9Y4D8 3996 aa0.62□□□□□ -2.31
SSXP9-201ENST00000417503 ANK3Q12955 4377 aaKnown RBP0.62□□□□□ -2.31
SSXP9-201ENST00000417503 DNAH2Q9P225 4427 aa0.61□□□□□ -2.31
SSXP9-201ENST00000417503 MT2AP02795 61 aa0.61□□□□□ -2.31
SSXP9-201ENST00000417503 DNAH17Q9UFH2 4485 aa0.61□□□□□ -2.31
SSXP9-201ENST00000417503 DNAH7Q8WXX0 4024 aa0.6□□□□□ -2.31
SSXP9-201ENST00000417503 MT1HL1P0DM35 61 aa0.6□□□□□ -2.31
SSXP9-201ENST00000417503 MT1MQ8N339 61 aa0.6□□□□□ -2.31
SSXP9-201ENST00000417503 VPS13CQ709C8 3753 aa0.59□□□□□ -2.31
SSXP9-201ENST00000417503 KRTAP21-1Q3LI58 79 aa0.58□□□□□ -2.32
SSXP9-201ENST00000417503 LRP1Q07954 4544 aaKnown RBP0.57□□□□□ -2.32
SSXP9-201ENST00000417503 APOBP04114 4563 aaKnown RBP0.57□□□□□ -2.32
SSXP9-201ENST00000417503 MT1BP07438 61 aa0.57□□□□□ -2.32
SSXP9-201ENST00000417503 KRTAP19-2Q3LHN2 52 aa0.57□□□□□ -2.32
SSXP9-201ENST00000417503 PKHD1L1Q86WI1 4243 aa0.56□□□□□ -2.32
SSXP9-201ENST00000417503 FAT3Q8TDW7 4589 aa0.56□□□□□ -2.32
SSXP9-201ENST00000417503 MUC16Q8WXI7 14507 aa0.56□□□□□ -2.32
SSXP9-201ENST00000417503 MT1FP04733 61 aa0.56□□□□□ -2.32
SSXP9-201ENST00000417503 KRTAP19-7Q3SYF9 63 aa0.56□□□□□ -2.32
SSXP9-201ENST00000417503 KRTAP5-10Q6L8G5 202 aa0.56□□□□□ -2.32
SSXP9-201ENST00000417503 SYNE1Q8NF91 8797 aaKnown RBP0.56□□□□□ -2.32
SSXP9-201ENST00000417503 LPAP08519 4548 aa0.55□□□□□ -2.32
SSXP9-201ENST00000417503 DNAH5Q8TE73 4624 aa0.54□□□□□ -2.32
SSXP9-201ENST00000417503 STARD9Q9P2P6 4700 aa0.53□□□□□ -2.32
SSXP9-201ENST00000417503 PLECQ15149 4684 aaKnown RBP0.52□□□□□ -2.33
SSXP9-201ENST00000417503 PKHD1P08F94 4074 aa0.52□□□□□ -2.33
SSXP9-201ENST00000417503 DNHD1Q96M86 4753 aa0.51□□□□□ -2.33
SSXP9-201ENST00000417503 DYNC1H1Q14204 4646 aaKnown RBP0.49□□□□□ -2.33
SSXP9-201ENST00000417503 FAT1Q14517 4588 aa0.49□□□□□ -2.33
SSXP9-201ENST00000417503 KRTAP6-1Q3LI64 71 aa0.48□□□□□ -2.33
SSXP9-201ENST00000417503 LRP1BQ9NZR2 4599 aa0.46□□□□□ -2.34
SSXP9-201ENST00000417503 MUC17Q685J3 4493 aa0.46□□□□□ -2.34
SSXP9-201ENST00000417503 FAT4Q6V0I7 4981 aa0.45□□□□□ -2.34
SSXP9-201ENST00000417503 KMT2CQ8NEZ4 4911 aaKnown RBP0.45□□□□□ -2.34
SSXP9-201ENST00000417503 HYDINQ4G0P3 5121 aa0.44□□□□□ -2.34
SSXP9-201ENST00000417503 RYR3Q15413 4870 aa0.44□□□□□ -2.34
SSXP9-201ENST00000417503 RYR2Q92736 4967 aa0.43□□□□□ -2.34
SSXP9-201ENST00000417503 RYR1P21817 5038 aa0.43□□□□□ -2.34
SSXP9-201ENST00000417503 KIAA1109Q2LD37 5005 aa0.42□□□□□ -2.34
SSXP9-201ENST00000417503 HERC2O95714 4834 aa0.42□□□□□ -2.34
SSXP9-201ENST00000417503 EPPK1P58107 5090 aaKnown RBP0.41□□□□□ -2.34
SSXP9-201ENST00000417503 HERC1Q15751 4861 aa0.4□□□□□ -2.34
SSXP9-201ENST00000417503 BIRC6Q9NR09 4857 aa0.4□□□□□ -2.34
SSXP9-201ENST00000417503 LRP2P98164 4655 aa0.4□□□□□ -2.35
SSXP9-201ENST00000417503 ABCA13Q86UQ4 5058 aa0.4□□□□□ -2.35
SSXP9-201ENST00000417503 HMCN2Q8NDA2 5059 aa0.4□□□□□ -2.35
SSXP9-201ENST00000417503 PCLOQ9Y6V0 5065 aa0.4□□□□□ -2.35
SSXP9-201ENST00000417503 MUC2Q02817 5179 aa0.39□□□□□ -2.35
SSXP9-201ENST00000417503 RNF213Q63HN8 5207 aa0.37□□□□□ -2.35
SSXP9-201ENST00000417503 UBR4Q5T4S7 5183 aa0.37□□□□□ -2.35
SSXP9-201ENST00000417503 FSIP2Q5CZC0 6907 aa0.36□□□□□ -2.35
SSXP9-201ENST00000417503 PHGR1C9JFL3 82 aa0.35□□□□□ -2.35
SSXP9-201ENST00000417503 KRTAP19-6Q3LI70 58 aa0.35□□□□□ -2.35
SSXP9-201ENST00000417503 AHNAK2Q8IVF2 5795 aa0.32□□□□□ -2.36
SSXP9-201ENST00000417503 SYNE2Q8WXH0 6885 aaKnown RBP0.32□□□□□ -2.36
SSXP9-201ENST00000417503 USH2AO75445 5202 aa0.31□□□□□ -2.36
SSXP9-201ENST00000417503 AHNAKQ09666 5890 aaKnown RBP0.3□□□□□ -2.36
SSXP9-201ENST00000417503 SSPOA2VEC9 5147 aa0.29□□□□□ -2.36
SSXP9-201ENST00000417503 MACF1Q9UPN3 7388 aaKnown RBP0.28□□□□□ -2.36
SSXP9-201ENST00000417503 MUC5BQ9HC84 5762 aaPredicted RBP0.28□□□□□ -2.37
SSXP9-201ENST00000417503 KMT2DO14686 5537 aa0.27□□□□□ -2.37
SSXP9-201ENST00000417503 MT4P47944 62 aa0.27□□□□□ -2.37
SSXP9-201ENST00000417503 NEBP20929 6669 aa0.27□□□□□ -2.37
SSXP9-201ENST00000417503 MUC12Q9UKN1 5478 aa0.26□□□□□ -2.37
SSXP9-201ENST00000417503 MDN1Q9NU22 5596 aa0.25□□□□□ -2.37
SSXP9-201ENST00000417503 DSTQ03001 7570 aaKnown RBP0.24□□□□□ -2.37
SSXP9-201ENST00000417503 MUC5ACP98088 5654 aa0.23□□□□□ -2.37
SSXP9-201ENST00000417503 KRTAP20-2Q3LI61 65 aa0.23□□□□□ -2.37
SSXP9-201ENST00000417503 KRTAP20-1Q3LI63 56 aa0.23□□□□□ -2.37
SSXP9-201ENST00000417503 GPR98Q8WXG9 6306 aa0.17□□□□□ -2.38
Retrieved 77 of 20,778 RNA–protein pairs in 14.1 ms