RNA–Protein interactions for RNA: ENST00000417493.1

SNRNP25-204, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 25, humanhuman

TSL 5

Gene SNRNP25, Length 408 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP25-204ENST00000417493 C10orf95Q9H7T3 257 aa4.01□□□□□ -1.77
SNRNP25-204ENST00000417493 MT1GP13640 62 aa3.99□□□□□ -1.77
SNRNP25-204ENST00000417493 Q1T7F1 81 aa3.96□□□□□ -1.78
SNRNP25-204ENST00000417493 LCE3AQ5TA76 89 aa3.96□□□□□ -1.78
SNRNP25-204ENST00000417493 PSPHP1O15172 72 aa3.93□□□□□ -1.78
SNRNP25-204ENST00000417493 KRTAP25-1Q3LHN0 102 aa3.92□□□□□ -1.78
SNRNP25-204ENST00000417493 DSTQ03001 7570 aaKnown RBP3.91□□□□□ -1.78
SNRNP25-204ENST00000417493 MT1LQ93083 61 aa3.89□□□□□ -1.79
SNRNP25-204ENST00000417493 A6NED7 52 aa3.87□□□□□ -1.79
SNRNP25-204ENST00000417493 KRTAP12-3P60328 96 aa3.86□□□□□ -1.79
SNRNP25-204ENST00000417493 MT1MQ8N339 61 aa3.86□□□□□ -1.79
SNRNP25-204ENST00000417493 RPS28P62857 69 aaKnown RBP3.83□□□□□ -1.8
SNRNP25-204ENST00000417493 KRTAP23-1A1A580 65 aa3.79□□□□□ -1.8
SNRNP25-204ENST00000417493 PRO0628Q9UI54 55 aa3.79□□□□□ -1.8
SNRNP25-204ENST00000417493 KRTAP19-4Q3LI73 84 aa3.77□□□□□ -1.81
SNRNP25-204ENST00000417493 LCE4AQ5TA78 99 aa3.77□□□□□ -1.81
SNRNP25-204ENST00000417493 CDC42SE1Q9NRR8 79 aa3.77□□□□□ -1.81
SNRNP25-204ENST00000417493 KRTAP4-9Q9BYQ8 210 aa3.73□□□□□ -1.81
SNRNP25-204ENST00000417493 KRTAP4-3Q9BYR4 195 aa3.69□□□□□ -1.82
SNRNP25-204ENST00000417493 ROMO1P60602 79 aa3.68□□□□□ -1.82
SNRNP25-204ENST00000417493 LCE1DQ5T752 114 aa3.68□□□□□ -1.82
SNRNP25-204ENST00000417493 MT4P47944 62 aa3.65□□□□□ -1.83
SNRNP25-204ENST00000417493 PMAIP1Q13794 54 aa3.64□□□□□ -1.83
SNRNP25-204ENST00000417493 KRTAP15-1Q3LI76 137 aa3.64□□□□□ -1.83
SNRNP25-204ENST00000417493 KRTAP5-4Q6L8H1 288 aa3.64□□□□□ -1.83
SNRNP25-204ENST00000417493 KRTAP4-7Q9BYR0 210 aa3.63□□□□□ -1.83
SNRNP25-204ENST00000417493 HMCN1Q96RW7 5635 aa3.63□□□□□ -1.83
SNRNP25-204ENST00000417493 GPR98Q8WXG9 6306 aa3.58□□□□□ -1.84
SNRNP25-204ENST00000417493 LCE3CQ5T5A8 94 aa3.55□□□□□ -1.84
SNRNP25-204ENST00000417493 KRTAP12-4P60329 112 aa3.53□□□□□ -1.84
SNRNP25-204ENST00000417493 KRTAP5-5Q701N2 237 aaPredicted RBP3.51□□□□□ -1.85
SNRNP25-204ENST00000417493 KRTAP4-6Q9BYQ5 205 aa3.51□□□□□ -1.85
SNRNP25-204ENST00000417493 SPRR5A0A1B0GTR4 108 aa3.49□□□□□ -1.85
SNRNP25-204ENST00000417493 AHNAK2Q8IVF2 5795 aa3.46□□□□□ -1.86
SNRNP25-204ENST00000417493 PRAC1Q96KF2 57 aa3.45□□□□□ -1.86
SNRNP25-204ENST00000417493 LOC100996750A0A140TA64 210 aa3.44□□□□□ -1.86
SNRNP25-204ENST00000417493 KRTAP20-2Q3LI61 65 aa3.44□□□□□ -1.86
SNRNP25-204ENST00000417493 KRTAP5-10Q6L8G5 202 aa3.38□□□□□ -1.87
SNRNP25-204ENST00000417493 KTN1-AS1Q86SY8 53 aa3.38□□□□□ -1.87
SNRNP25-204ENST00000417493 BRK1Q8WUW1 75 aa3.37□□□□□ -1.87
SNRNP25-204ENST00000417493 MT1AP04731 61 aa3.34□□□□□ -1.87
SNRNP25-204ENST00000417493 KRTAP5-3Q6L8H2 238 aa3.33□□□□□ -1.88
SNRNP25-204ENST00000417493 KRTAP5-7Q6L8G8 165 aa3.27□□□□□ -1.89
SNRNP25-204ENST00000417493 SYNE1Q8NF91 8797 aaKnown RBP3.26□□□□□ -1.89
SNRNP25-204ENST00000417493 KRTAP6-1Q3LI64 71 aa3.26□□□□□ -1.89
SNRNP25-204ENST00000417493 KRTAP9-6A8MVA2 160 aa3.24□□□□□ -1.89
SNRNP25-204ENST00000417493 KRTAP9-4Q9BYQ2 154 aa3.22□□□□□ -1.89
SNRNP25-204ENST00000417493 LUZP6Q538Z0 58 aa3.21□□□□□ -1.9
SNRNP25-204ENST00000417493 KRTAP5-2Q701N4 177 aa3.2□□□□□ -1.9
SNRNP25-204ENST00000417493 KRTAP4-11Q9BYQ6 195 aa3.14□□□□□ -1.91
SNRNP25-204ENST00000417493 KRTAP6-2Q3LI66 62 aa3.12□□□□□ -1.91
SNRNP25-204ENST00000417493 MT3P25713 68 aa3.1□□□□□ -1.91
SNRNP25-204ENST00000417493 NDUFAF8A1L188 74 aa3.01□□□□□ -1.93
SNRNP25-204ENST00000417493 KRTAP5-8O75690 187 aa2.99□□□□□ -1.93
SNRNP25-204ENST00000417493 OBSCNQ5VST9 7968 aa2.96□□□□□ -1.94
SNRNP25-204ENST00000417493 KRTAP9-9Q9BYP9 154 aa2.92□□□□□ -1.94
SNRNP25-204ENST00000417493 MUC5BQ9HC84 5762 aaPredicted RBP2.87□□□□□ -1.95
SNRNP25-204ENST00000417493 KRTAP5-1Q6L8H4 278 aa2.84□□□□□ -1.95
SNRNP25-204ENST00000417493 AHNAKQ09666 5890 aaKnown RBP2.83□□□□□ -1.96
SNRNP25-204ENST00000417493 LCE1EQ5T753 118 aa2.83□□□□□ -1.96
SNRNP25-204ENST00000417493 MUC5ACP98088 5654 aa2.82□□□□□ -1.96
SNRNP25-204ENST00000417493 LCE1BQ5T7P3 118 aa2.61□□□□□ -1.99
SNRNP25-204ENST00000417493 LCE1CQ5T751 118 aa2.6□□□□□ -1.99
SNRNP25-204ENST00000417493 LCE3DQ9BYE3 92 aa2.6□□□□□ -1.99
SNRNP25-204ENST00000417493 KRTAP4-2Q9BYR5 136 aa2.58□□□□□ -2
SNRNP25-204ENST00000417493 KRTAP4-12Q9BQ66 201 aa2.47□□□□□ -2.01
SNRNP25-204ENST00000417493 LCE3EQ5T5B0 92 aa2.46□□□□□ -2.02
SNRNP25-204ENST00000417493 INE1O15225 51 aa2.45□□□□□ -2.02
SNRNP25-204ENST00000417493 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.37□□□□□ -2.03
SNRNP25-204ENST00000417493 KRTAP5-11Q6L8G4 156 aa2.35□□□□□ -2.03
SNRNP25-204ENST00000417493 LCE1FQ5T754 118 aa2.31□□□□□ -2.04
SNRNP25-204ENST00000417493 KRTAP21-2Q3LI59 83 aa2.14□□□□□ -2.07
SNRNP25-204ENST00000417493 PHGR1C9JFL3 82 aa2.01□□□□□ -2.09
SNRNP25-204ENST00000417493 KRTAP4-4Q9BYR3 166 aa1.93□□□□□ -2.1
SNRNP25-204ENST00000417493 PRM1P04553 51 aa1.84□□□□□ -2.11
SNRNP25-204ENST00000417493 MUC19Q7Z5P9 8384 aa1.8□□□□□ -2.12
SNRNP25-204ENST00000417493 KRTAP21-1Q3LI58 79 aa1.55□□□□□ -2.16
SNRNP25-204ENST00000417493 MUC16Q8WXI7 14507 aa1.3□□□□□ -2.2
Retrieved 78 of 20,778 RNA–protein pairs in 88.4 ms