RNA–Protein interactions for RNA: ENST00000417440.2

CASP4-202, Transcript of caspase 4, humanhuman

TSL 3

Gene CASP4, Length 763 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-202ENST00000417440 KRTAP13-4Q3LI77 160 aa2.64□□□□□ -1.99
CASP4-202ENST00000417440 A0A0D9SG42 100 aa2.62□□□□□ -1.99
CASP4-202ENST00000417440 KRTAP19-5Q3LI72 72 aa2.62□□□□□ -1.99
CASP4-202ENST00000417440 MT1GP13640 62 aa2.61□□□□□ -1.99
CASP4-202ENST00000417440 PP632Q6XCG6 107 aa2.6□□□□□ -1.99
CASP4-202ENST00000417440 SPINT4Q6UDR6 99 aa2.58□□□□□ -2
CASP4-202ENST00000417440 MT1MQ8N339 61 aa2.58□□□□□ -2
CASP4-202ENST00000417440 KRTAP4-3Q9BYR4 195 aa2.57□□□□□ -2
CASP4-202ENST00000417440 KRTAP5-10Q6L8G5 202 aa2.56□□□□□ -2
CASP4-202ENST00000417440 SPATA8Q6RVD6 105 aa2.54□□□□□ -2
CASP4-202ENST00000417440 MT1LQ93083 61 aa2.54□□□□□ -2
CASP4-202ENST00000417440 SNURFQ9Y675 71 aa2.54□□□□□ -2
CASP4-202ENST00000417440 OBSCNQ5VST9 7968 aa2.53□□□□□ -2
CASP4-202ENST00000417440 J3QR89 54 aa2.53□□□□□ -2
CASP4-202ENST00000417440 A0A1B0GV90 55 aa2.52□□□□□ -2.01
CASP4-202ENST00000417440 SEC61GP60059 68 aa2.52□□□□□ -2.01
CASP4-202ENST00000417440 SMIM20Q8N5G0 67 aa2.5□□□□□ -2.01
CASP4-202ENST00000417440 SERP1Q9Y6X1 66 aa2.5□□□□□ -2.01
CASP4-202ENST00000417440 C10orf95Q9H7T3 257 aa2.49□□□□□ -2.01
CASP4-202ENST00000417440 KRTAP12-1P59990 96 aa2.48□□□□□ -2.01
CASP4-202ENST00000417440 KRTAP5-7Q6L8G8 165 aa2.48□□□□□ -2.01
CASP4-202ENST00000417440 SPRR5A0A1B0GTR4 108 aa2.47□□□□□ -2.01
CASP4-202ENST00000417440 A0A1B0GU33 70 aa2.47□□□□□ -2.01
CASP4-202ENST00000417440 LCE3AQ5TA76 89 aa2.47□□□□□ -2.01
CASP4-202ENST00000417440 SPANXA2-OT1Q8N9U9 137 aa2.47□□□□□ -2.01
CASP4-202ENST00000417440 COA5Q86WW8 74 aa2.46□□□□□ -2.02
CASP4-202ENST00000417440 TNP1P09430 55 aa2.42□□□□□ -2.02
CASP4-202ENST00000417440 KRTAP20-2Q3LI61 65 aa2.42□□□□□ -2.02
CASP4-202ENST00000417440 KRTAP5-2Q701N4 177 aa2.41□□□□□ -2.02
CASP4-202ENST00000417440 SMIM26A0A096LP01 95 aa2.38□□□□□ -2.03
CASP4-202ENST00000417440 KRTAP12-3P60328 96 aa2.37□□□□□ -2.03
CASP4-202ENST00000417440 KRTAP12-4P60329 112 aa2.37□□□□□ -2.03
CASP4-202ENST00000417440 SERP2Q8N6R1 65 aa2.37□□□□□ -2.03
CASP4-202ENST00000417440 A0A1B0GU69 56 aa2.35□□□□□ -2.03
CASP4-202ENST00000417440 KRTAP5-5Q701N2 237 aaPredicted RBP2.35□□□□□ -2.03
CASP4-202ENST00000417440 K7ERU9 68 aa2.34□□□□□ -2.03
CASP4-202ENST00000417440 LCE3DQ9BYE3 92 aa2.31□□□□□ -2.04
CASP4-202ENST00000417440 SYNE1Q8NF91 8797 aaKnown RBP2.3□□□□□ -2.04
CASP4-202ENST00000417440 H7BZZ5 65 aa2.25□□□□□ -2.05
CASP4-202ENST00000417440 COX7CP15954 63 aa2.25□□□□□ -2.05
CASP4-202ENST00000417440 AHNAKQ09666 5890 aaKnown RBP2.24□□□□□ -2.05
CASP4-202ENST00000417440 MUC5BQ9HC84 5762 aaPredicted RBP2.22□□□□□ -2.05
CASP4-202ENST00000417440 PRR15LQ9BU68 103 aa2.21□□□□□ -2.06
CASP4-202ENST00000417440 KRTAP5-8O75690 187 aa2.19□□□□□ -2.06
CASP4-202ENST00000417440 MUC5ACP98088 5654 aa2.19□□□□□ -2.06
CASP4-202ENST00000417440 KRTAP25-1Q3LHN0 102 aa2.17□□□□□ -2.06
CASP4-202ENST00000417440 KRTAP6-1Q3LI64 71 aa2.17□□□□□ -2.06
CASP4-202ENST00000417440 MT1AP04731 61 aa2.16□□□□□ -2.06
CASP4-202ENST00000417440 UQCR11O14957 56 aa2.13□□□□□ -2.07
CASP4-202ENST00000417440 LINC01558Q9Y6Z2 57 aa2.13□□□□□ -2.07
CASP4-202ENST00000417440 KRTAP6-2Q3LI66 62 aa2.12□□□□□ -2.07
CASP4-202ENST00000417440 LCE1CQ5T751 118 aa2.11□□□□□ -2.07
CASP4-202ENST00000417440 LCE1BQ5T7P3 118 aa2.11□□□□□ -2.07
CASP4-202ENST00000417440 ANAPC13Q9BS18 74 aa2.09□□□□□ -2.07
CASP4-202ENST00000417440 K7ERS5 55 aa2.08□□□□□ -2.08
CASP4-202ENST00000417440 MIR22HGQ0VDD5 57 aa2.08□□□□□ -2.08
CASP4-202ENST00000417440 CCDC179H3BU77 68 aa2.06□□□□□ -2.08
CASP4-202ENST00000417440 ATP5EP56381 51 aaPredicted RBP2.04□□□□□ -2.08
CASP4-202ENST00000417440 PSPHP1O15172 72 aa2.02□□□□□ -2.09
CASP4-202ENST00000417440 LUZP6Q538Z0 58 aa2.01□□□□□ -2.09
CASP4-202ENST00000417440 RPS28P62857 69 aaKnown RBP1.97□□□□□ -2.09
CASP4-202ENST00000417440 TMEM258P61165 79 aa1.93□□□□□ -2.1
CASP4-202ENST00000417440 CDC42SE1Q9NRR8 79 aa1.93□□□□□ -2.1
CASP4-202ENST00000417440 Q1T7F1 81 aa1.92□□□□□ -2.1
CASP4-202ENST00000417440 ROMO1P60602 79 aa1.89□□□□□ -2.11
CASP4-202ENST00000417440 A6NED7 52 aa1.87□□□□□ -2.11
CASP4-202ENST00000417440 V9GYY9 64 aa1.87□□□□□ -2.11
CASP4-202ENST00000417440 PRO0628Q9UI54 55 aa1.86□□□□□ -2.11
CASP4-202ENST00000417440 MUC19Q7Z5P9 8384 aa1.67□□□□□ -2.14
CASP4-202ENST00000417440 PHGR1C9JFL3 82 aa1.54□□□□□ -2.16
CASP4-202ENST00000417440 KRTAP21-2Q3LI59 83 aa1.48□□□□□ -2.17
CASP4-202ENST00000417440 BRK1Q8WUW1 75 aa1.39□□□□□ -2.19
CASP4-202ENST00000417440 PMAIP1Q13794 54 aa1.29□□□□□ -2.2
CASP4-202ENST00000417440 KTN1-AS1Q86SY8 53 aa1.17□□□□□ -2.22
CASP4-202ENST00000417440 KRTAP21-1Q3LI58 79 aa1.15□□□□□ -2.23
CASP4-202ENST00000417440 PRM1P04553 51 aa0.97□□□□□ -2.25
CASP4-202ENST00000417440 MUC16Q8WXI7 14507 aa0.87□□□□□ -2.27
CASP4-202ENST00000417440 INE1O15225 51 aa0.78□□□□□ -2.28
Retrieved 78 of 20,778 RNA–protein pairs in 33.9 ms