RNA–Protein interactions for RNA: ENST00000417344.2

CCNT1-202, Transcript of cyclin T1, humanhuman

TSL 2

Gene CCNT1, Length 2,017 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNT1-202ENST00000417344 UBR4Q5T4S7 5183 aa2.51□□□□□ -2.01
CCNT1-202ENST00000417344 KRTAP12-3P60328 96 aa2.46□□□□□ -2.02
CCNT1-202ENST00000417344 SPRR2GQ9BYE4 73 aa2.46□□□□□ -2.02
CCNT1-202ENST00000417344 KRTAP9-6A8MVA2 160 aa2.45□□□□□ -2.02
CCNT1-202ENST00000417344 MUC2Q02817 5179 aa2.38□□□□□ -2.03
CCNT1-202ENST00000417344 GPR98Q8WXG9 6306 aa2.36□□□□□ -2.03
CCNT1-202ENST00000417344 LCE3EQ5T5B0 92 aa2.34□□□□□ -2.03
CCNT1-202ENST00000417344 KRTAP2-3P0C7H8 128 aa2.33□□□□□ -2.04
CCNT1-202ENST00000417344 KRTAP2-4Q9BYR9 128 aa2.33□□□□□ -2.04
CCNT1-202ENST00000417344 KRTAP2-1Q9BYU5 128 aa2.33□□□□□ -2.04
CCNT1-202ENST00000417344 MT1XP80297 61 aa2.32□□□□□ -2.04
CCNT1-202ENST00000417344 HMCN2Q8NDA2 5059 aa2.31□□□□□ -2.04
CCNT1-202ENST00000417344 KRTAP5-9P26371 169 aa2.3□□□□□ -2.04
CCNT1-202ENST00000417344 KRTAP19-8Q3LI54 63 aa2.29□□□□□ -2.04
CCNT1-202ENST00000417344 FAT4Q6V0I7 4981 aa2.26□□□□□ -2.05
CCNT1-202ENST00000417344 RNF213Q63HN8 5207 aa2.26□□□□□ -2.05
CCNT1-202ENST00000417344 MT1FP04733 61 aa2.25□□□□□ -2.05
CCNT1-202ENST00000417344 MT1BP07438 61 aa2.25□□□□□ -2.05
CCNT1-202ENST00000417344 KRTAP19-5Q3LI72 72 aa2.25□□□□□ -2.05
CCNT1-202ENST00000417344 M0R2T5 61 aa2.24□□□□□ -2.05
CCNT1-202ENST00000417344 MT2AP02795 61 aa2.24□□□□□ -2.05
CCNT1-202ENST00000417344 MUC5BQ9HC84 5762 aaPredicted RBP2.22□□□□□ -2.05
CCNT1-202ENST00000417344 KRTAP5-4Q6L8H1 288 aa2.19□□□□□ -2.06
CCNT1-202ENST00000417344 MT1HP80294 61 aa2.18□□□□□ -2.06
CCNT1-202ENST00000417344 KRTAP5-1Q6L8H4 278 aa2.17□□□□□ -2.06
CCNT1-202ENST00000417344 KRTAP12-4P60329 112 aa2.14□□□□□ -2.07
CCNT1-202ENST00000417344 CRCT1Q9UGL9 99 aa2.13□□□□□ -2.07
CCNT1-202ENST00000417344 FSIP2Q5CZC0 6907 aa2.13□□□□□ -2.07
CCNT1-202ENST00000417344 KMT2DO14686 5537 aa2.08□□□□□ -2.08
CCNT1-202ENST00000417344 KRTAP4-4Q9BYR3 166 aa2.08□□□□□ -2.08
CCNT1-202ENST00000417344 KRTAP19-7Q3SYF9 63 aa2.07□□□□□ -2.08
CCNT1-202ENST00000417344 MT1LQ93083 61 aa2.03□□□□□ -2.08
CCNT1-202ENST00000417344 MT1EP04732 61 aa1.98□□□□□ -2.09
CCNT1-202ENST00000417344 KRTAP6-3Q3LI67 103 aa1.95□□□□□ -2.1
CCNT1-202ENST00000417344 LCE3DQ9BYE3 92 aa1.95□□□□□ -2.1
CCNT1-202ENST00000417344 KRTAP5-5Q701N2 237 aaPredicted RBP1.95□□□□□ -2.1
CCNT1-202ENST00000417344 PRM1P04553 51 aa1.94□□□□□ -2.1
CCNT1-202ENST00000417344 MT1GP13640 62 aa1.93□□□□□ -2.1
CCNT1-202ENST00000417344 USH2AO75445 5202 aa1.92□□□□□ -2.1
CCNT1-202ENST00000417344 AHNAKQ09666 5890 aaKnown RBP1.92□□□□□ -2.1
CCNT1-202ENST00000417344 KRTAP5-2Q701N4 177 aa1.91□□□□□ -2.1
CCNT1-202ENST00000417344 KRTAP4-3Q9BYR4 195 aa1.9□□□□□ -2.11
CCNT1-202ENST00000417344 MACF1Q9UPN3 7388 aaKnown RBP1.9□□□□□ -2.11
CCNT1-202ENST00000417344 SYNE2Q8WXH0 6885 aaKnown RBP1.89□□□□□ -2.11
CCNT1-202ENST00000417344 MT1AP04731 61 aa1.88□□□□□ -2.11
CCNT1-202ENST00000417344 OBSCNQ5VST9 7968 aa1.87□□□□□ -2.11
CCNT1-202ENST00000417344 LCE1CQ5T751 118 aa1.84□□□□□ -2.12
CCNT1-202ENST00000417344 LCE1BQ5T7P3 118 aa1.84□□□□□ -2.12
CCNT1-202ENST00000417344 SSPOA2VEC9 5147 aa1.84□□□□□ -2.12
CCNT1-202ENST00000417344 MT1MQ8N339 61 aa1.82□□□□□ -2.12
CCNT1-202ENST00000417344 SYNE1Q8NF91 8797 aaKnown RBP1.82□□□□□ -2.12
CCNT1-202ENST00000417344 FCGBPQ9Y6R7 5405 aaPredicted RBP1.81□□□□□ -2.12
CCNT1-202ENST00000417344 NEBP20929 6669 aa1.8□□□□□ -2.12
CCNT1-202ENST00000417344 KRTAP20-1Q3LI63 56 aa1.8□□□□□ -2.12
CCNT1-202ENST00000417344 KRTAP19-3Q7Z4W3 81 aa1.78□□□□□ -2.12
CCNT1-202ENST00000417344 KRTAP6-2Q3LI66 62 aa1.77□□□□□ -2.13
CCNT1-202ENST00000417344 AHNAK2Q8IVF2 5795 aa1.75□□□□□ -2.13
CCNT1-202ENST00000417344 KRTAP5-8O75690 187 aa1.73□□□□□ -2.13
CCNT1-202ENST00000417344 KRTAP6-1Q3LI64 71 aa1.73□□□□□ -2.13
CCNT1-202ENST00000417344 SPRR2FQ96RM1 72 aa1.71□□□□□ -2.14
CCNT1-202ENST00000417344 DSTQ03001 7570 aaKnown RBP1.7□□□□□ -2.14
CCNT1-202ENST00000417344 MUC12Q9UKN1 5478 aa1.69□□□□□ -2.14
CCNT1-202ENST00000417344 KRTAP19-6Q3LI70 58 aa1.67□□□□□ -2.14
CCNT1-202ENST00000417344 SPRR2AP35326 72 aa1.59□□□□□ -2.15
CCNT1-202ENST00000417344 MDN1Q9NU22 5596 aa1.59□□□□□ -2.15
CCNT1-202ENST00000417344 SPRR2EP22531 72 aa1.56□□□□□ -2.16
CCNT1-202ENST00000417344 SPRR2BP35325 72 aa1.55□□□□□ -2.16
CCNT1-202ENST00000417344 KRTAP5-7Q6L8G8 165 aa1.54□□□□□ -2.16
CCNT1-202ENST00000417344 SPRR2DP22532 72 aa1.51□□□□□ -2.17
CCNT1-202ENST00000417344 MUC5ACP98088 5654 aa1.46□□□□□ -2.18
CCNT1-202ENST00000417344 KRTAP5-10Q6L8G5 202 aa1.44□□□□□ -2.18
CCNT1-202ENST00000417344 MUC19Q7Z5P9 8384 aa1.4□□□□□ -2.19
CCNT1-202ENST00000417344 MT4P47944 62 aa1.33□□□□□ -2.2
CCNT1-202ENST00000417344 KRTAP21-2Q3LI59 83 aa1.27□□□□□ -2.21
CCNT1-202ENST00000417344 KRTAP21-1Q3LI58 79 aa1.26□□□□□ -2.21
CCNT1-202ENST00000417344 KRTAP20-2Q3LI61 65 aa1.16□□□□□ -2.22
CCNT1-202ENST00000417344 PHGR1C9JFL3 82 aa0.85□□□□□ -2.27
CCNT1-202ENST00000417344 MUC16Q8WXI7 14507 aa0.66□□□□□ -2.3
Retrieved 78 of 20,778 RNA–protein pairs in 266.1 ms