RNA–Protein interactions for RNA: ENST00000416781.1

TTC39DP-201, Transcript of tetratricopeptide repeat domain 39D, pseudogene, humanhuman

BASIC

Gene TTC39DP, Length 1,688 nt, Biotype unitary pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39DP-201ENST00000416781 PKHD1P08F94 4074 aa1.56□□□□□ -2.16
TTC39DP-201ENST00000416781 BIRC6Q9NR09 4857 aa1.56□□□□□ -2.16
TTC39DP-201ENST00000416781 MUC5BQ9HC84 5762 aaPredicted RBP1.54□□□□□ -2.16
TTC39DP-201ENST00000416781 DEFB4AO15263 64 aa1.54□□□□□ -2.16
TTC39DP-201ENST00000416781 KRTAP8-1Q8IUC2 63 aa1.53□□□□□ -2.16
TTC39DP-201ENST00000416781 PCLOQ9Y6V0 5065 aa1.52□□□□□ -2.17
TTC39DP-201ENST00000416781 KIAA1109Q2LD37 5005 aa1.52□□□□□ -2.17
TTC39DP-201ENST00000416781 HERC2O95714 4834 aa1.51□□□□□ -2.17
TTC39DP-201ENST00000416781 LRP1Q07954 4544 aaKnown RBP1.51□□□□□ -2.17
TTC39DP-201ENST00000416781 LPAP08519 4548 aa1.51□□□□□ -2.17
TTC39DP-201ENST00000416781 LRP1BQ9NZR2 4599 aa1.49□□□□□ -2.17
TTC39DP-201ENST00000416781 RYR1P21817 5038 aa1.49□□□□□ -2.17
TTC39DP-201ENST00000416781 HTN3P15516 51 aa1.48□□□□□ -2.17
TTC39DP-201ENST00000416781 DYNC1H1Q14204 4646 aaKnown RBP1.48□□□□□ -2.17
TTC39DP-201ENST00000416781 PRM1P04553 51 aa1.48□□□□□ -2.17
TTC39DP-201ENST00000416781 ABCA13Q86UQ4 5058 aa1.48□□□□□ -2.17
TTC39DP-201ENST00000416781 RPS29P62273 56 aaKnown RBP1.46□□□□□ -2.18
TTC39DP-201ENST00000416781 CRCT1Q9UGL9 99 aa1.45□□□□□ -2.18
TTC39DP-201ENST00000416781 FAT1Q14517 4588 aa1.43□□□□□ -2.18
TTC39DP-201ENST00000416781 HERC1Q15751 4861 aa1.41□□□□□ -2.18
TTC39DP-201ENST00000416781 KRTAP4-1Q9BYQ7 146 aa1.41□□□□□ -2.18
TTC39DP-201ENST00000416781 SYNE1Q8NF91 8797 aaKnown RBP1.39□□□□□ -2.19
TTC39DP-201ENST00000416781 SMR3BP02814 79 aaPredicted RBP1.39□□□□□ -2.19
TTC39DP-201ENST00000416781 MUC17Q685J3 4493 aa1.38□□□□□ -2.19
TTC39DP-201ENST00000416781 MT1HL1P0DM35 61 aa1.36□□□□□ -2.19
TTC39DP-201ENST00000416781 HMCN2Q8NDA2 5059 aa1.36□□□□□ -2.19
TTC39DP-201ENST00000416781 UBR4Q5T4S7 5183 aa1.36□□□□□ -2.19
TTC39DP-201ENST00000416781 LRP2P98164 4655 aa1.33□□□□□ -2.2
TTC39DP-201ENST00000416781 KRTAP19-3Q7Z4W3 81 aa1.32□□□□□ -2.2
TTC39DP-201ENST00000416781 RNF213Q63HN8 5207 aa1.32□□□□□ -2.2
TTC39DP-201ENST00000416781 MUC2Q02817 5179 aa1.31□□□□□ -2.2
TTC39DP-201ENST00000416781 KRTAP19-5Q3LI72 72 aa1.3□□□□□ -2.2
TTC39DP-201ENST00000416781 GPR98Q8WXG9 6306 aa1.29□□□□□ -2.2
TTC39DP-201ENST00000416781 AHNAKQ09666 5890 aaKnown RBP1.27□□□□□ -2.21
TTC39DP-201ENST00000416781 MT1AP04731 61 aa1.25□□□□□ -2.21
TTC39DP-201ENST00000416781 FCGBPQ9Y6R7 5405 aaPredicted RBP1.25□□□□□ -2.21
TTC39DP-201ENST00000416781 FAT4Q6V0I7 4981 aa1.24□□□□□ -2.21
TTC39DP-201ENST00000416781 SPRR2DP22532 72 aa1.2□□□□□ -2.22
TTC39DP-201ENST00000416781 KRTAP19-2Q3LHN2 52 aa1.2□□□□□ -2.22
TTC39DP-201ENST00000416781 SPRR2BP35325 72 aa1.17□□□□□ -2.22
TTC39DP-201ENST00000416781 KRTAP6-2Q3LI66 62 aa1.17□□□□□ -2.22
TTC39DP-201ENST00000416781 MT1HP80294 61 aa1.16□□□□□ -2.22
TTC39DP-201ENST00000416781 KRTAP21-1Q3LI58 79 aa1.13□□□□□ -2.23
TTC39DP-201ENST00000416781 FSIP2Q5CZC0 6907 aa1.13□□□□□ -2.23
TTC39DP-201ENST00000416781 SPRR2AP35326 72 aa1.12□□□□□ -2.23
TTC39DP-201ENST00000416781 USH2AO75445 5202 aa1.1□□□□□ -2.23
TTC39DP-201ENST00000416781 SPRR2FQ96RM1 72 aa1.08□□□□□ -2.24
TTC39DP-201ENST00000416781 MT2AP02795 61 aa1.07□□□□□ -2.24
TTC39DP-201ENST00000416781 MT1FP04733 61 aa1.07□□□□□ -2.24
TTC39DP-201ENST00000416781 SSPOA2VEC9 5147 aa1.06□□□□□ -2.24
TTC39DP-201ENST00000416781 AHNAK2Q8IVF2 5795 aa1.06□□□□□ -2.24
TTC39DP-201ENST00000416781 SPRR2EP22531 72 aa1.03□□□□□ -2.24
TTC39DP-201ENST00000416781 KRTAP19-6Q3LI70 58 aa1.03□□□□□ -2.24
TTC39DP-201ENST00000416781 MACF1Q9UPN3 7388 aaKnown RBP1.01□□□□□ -2.25
TTC39DP-201ENST00000416781 MT1EP04732 61 aa1□□□□□ -2.25
TTC39DP-201ENST00000416781 MT1BP07438 61 aa0.99□□□□□ -2.25
TTC39DP-201ENST00000416781 SPRR2GQ9BYE4 73 aa0.99□□□□□ -2.25
TTC39DP-201ENST00000416781 SYNE2Q8WXH0 6885 aaKnown RBP0.99□□□□□ -2.25
TTC39DP-201ENST00000416781 KRTAP19-8Q3LI54 63 aa0.98□□□□□ -2.25
TTC39DP-201ENST00000416781 MUC12Q9UKN1 5478 aa0.96□□□□□ -2.26
TTC39DP-201ENST00000416781 MT1LQ93083 61 aa0.95□□□□□ -2.26
TTC39DP-201ENST00000416781 MUC5ACP98088 5654 aa0.95□□□□□ -2.26
TTC39DP-201ENST00000416781 KMT2DO14686 5537 aa0.94□□□□□ -2.26
TTC39DP-201ENST00000416781 MDN1Q9NU22 5596 aa0.92□□□□□ -2.26
TTC39DP-201ENST00000416781 MT1XP80297 61 aa0.92□□□□□ -2.26
TTC39DP-201ENST00000416781 NEBP20929 6669 aa0.9□□□□□ -2.27
TTC39DP-201ENST00000416781 KRTAP20-1Q3LI63 56 aa0.9□□□□□ -2.27
TTC39DP-201ENST00000416781 MUC16Q8WXI7 14507 aa0.87□□□□□ -2.27
TTC39DP-201ENST00000416781 KRTAP5-10Q6L8G5 202 aa0.86□□□□□ -2.27
TTC39DP-201ENST00000416781 KRTAP19-7Q3SYF9 63 aa0.84□□□□□ -2.28
TTC39DP-201ENST00000416781 DSTQ03001 7570 aaKnown RBP0.82□□□□□ -2.28
TTC39DP-201ENST00000416781 MT1GP13640 62 aa0.78□□□□□ -2.29
TTC39DP-201ENST00000416781 MT1MQ8N339 61 aa0.77□□□□□ -2.29
TTC39DP-201ENST00000416781 MT4P47944 62 aa0.72□□□□□ -2.29
TTC39DP-201ENST00000416781 KRTAP20-2Q3LI61 65 aa0.7□□□□□ -2.3
TTC39DP-201ENST00000416781 KRTAP6-1Q3LI64 71 aa0.65□□□□□ -2.3
TTC39DP-201ENST00000416781 PHGR1C9JFL3 82 aa0.51□□□□□ -2.33
Retrieved 77 of 20,778 RNA–protein pairs in 80.2 ms