RNA–Protein interactions for RNA: ENST00000415807.6

FNDC3B-202, Transcript of fibronectin type III domain containing 3B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FNDC3B, Length 5,083 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3B-202ENST00000415807 MT1EP04732 61 aa4.03□□□□□ -1.76
FNDC3B-202ENST00000415807 MT1GP13640 62 aa4.02□□□□□ -1.77
FNDC3B-202ENST00000415807 MT1LQ93083 61 aa4.01□□□□□ -1.77
FNDC3B-202ENST00000415807 KRTAP9-2Q9BYQ4 174 aa4□□□□□ -1.77
FNDC3B-202ENST00000415807 KRTAP4-3Q9BYR4 195 aa4□□□□□ -1.77
FNDC3B-202ENST00000415807 SYNE2Q8WXH0 6885 aaKnown RBP4□□□□□ -1.77
FNDC3B-202ENST00000415807 MACF1Q9UPN3 7388 aaKnown RBP3.97□□□□□ -1.77
FNDC3B-202ENST00000415807 LOC100996750A0A140TA64 210 aa3.93□□□□□ -1.78
FNDC3B-202ENST00000415807 KRTAP19-3Q7Z4W3 81 aa3.9□□□□□ -1.79
FNDC3B-202ENST00000415807 LCE2DQ5TA82 110 aaPredicted RBP3.89□□□□□ -1.79
FNDC3B-202ENST00000415807 SPRR2EP22531 72 aa3.88□□□□□ -1.79
FNDC3B-202ENST00000415807 SPRR2BP35325 72 aa3.88□□□□□ -1.79
FNDC3B-202ENST00000415807 SPRR2AP35326 72 aa3.88□□□□□ -1.79
FNDC3B-202ENST00000415807 KRTAP9-6A8MVA2 160 aa3.86□□□□□ -1.79
FNDC3B-202ENST00000415807 MT1MQ8N339 61 aa3.83□□□□□ -1.8
FNDC3B-202ENST00000415807 LCE3BQ5TA77 95 aa3.79□□□□□ -1.8
FNDC3B-202ENST00000415807 KRTAP19-4Q3LI73 84 aa3.76□□□□□ -1.81
FNDC3B-202ENST00000415807 SPRR2DP22532 72 aa3.71□□□□□ -1.82
FNDC3B-202ENST00000415807 MDN1Q9NU22 5596 aa3.69□□□□□ -1.82
FNDC3B-202ENST00000415807 LCE5AQ5TCM9 118 aa3.61□□□□□ -1.83
FNDC3B-202ENST00000415807 KRTAP9-6A0A140TA67 174 aa3.58□□□□□ -1.84
FNDC3B-202ENST00000415807 KRTAP12-4P60329 112 aa3.57□□□□□ -1.84
FNDC3B-202ENST00000415807 LCE1AQ5T7P2 110 aa3.56□□□□□ -1.84
FNDC3B-202ENST00000415807 KRTAP4-9Q9BYQ8 210 aa3.55□□□□□ -1.84
FNDC3B-202ENST00000415807 KRTAP2-3P0C7H8 128 aa3.52□□□□□ -1.85
FNDC3B-202ENST00000415807 KRTAP2-4Q9BYR9 128 aa3.52□□□□□ -1.85
FNDC3B-202ENST00000415807 KRTAP2-1Q9BYU5 128 aa3.52□□□□□ -1.85
FNDC3B-202ENST00000415807 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.51□□□□□ -1.85
FNDC3B-202ENST00000415807 KRTAP6-1Q3LI64 71 aa3.45□□□□□ -1.86
FNDC3B-202ENST00000415807 LCE3DQ9BYE3 92 aa3.41□□□□□ -1.86
FNDC3B-202ENST00000415807 MT4P47944 62 aa3.41□□□□□ -1.86
FNDC3B-202ENST00000415807 KRTAP9-7A8MTY7 169 aa3.39□□□□□ -1.87
FNDC3B-202ENST00000415807 KRTAP6-3Q3LI67 103 aa3.38□□□□□ -1.87
FNDC3B-202ENST00000415807 MT1AP04731 61 aa3.38□□□□□ -1.87
FNDC3B-202ENST00000415807 KRTAP5-9P26371 169 aa3.35□□□□□ -1.87
FNDC3B-202ENST00000415807 LCE3EQ5T5B0 92 aa3.32□□□□□ -1.88
FNDC3B-202ENST00000415807 KRTAP6-2Q3LI66 62 aa3.24□□□□□ -1.89
FNDC3B-202ENST00000415807 MT3P25713 68 aa3.24□□□□□ -1.89
FNDC3B-202ENST00000415807 KRTAP9-4Q9BYQ2 154 aa3.18□□□□□ -1.9
FNDC3B-202ENST00000415807 NEBP20929 6669 aa3.15□□□□□ -1.9
FNDC3B-202ENST00000415807 PRM1P04553 51 aa3.11□□□□□ -1.91
FNDC3B-202ENST00000415807 KRTAP4-6Q9BYQ5 205 aa3.09□□□□□ -1.92
FNDC3B-202ENST00000415807 LCE1DQ5T752 114 aa3.05□□□□□ -1.92
FNDC3B-202ENST00000415807 KRTAP20-1Q3LI63 56 aa3.05□□□□□ -1.92
FNDC3B-202ENST00000415807 KRTAP5-5Q701N2 237 aaPredicted RBP3.01□□□□□ -1.93
FNDC3B-202ENST00000415807 KRTAP2-2Q9BYT5 123 aa3.01□□□□□ -1.93
FNDC3B-202ENST00000415807 LCE1BQ5T7P3 118 aa3□□□□□ -1.93
FNDC3B-202ENST00000415807 LCE4AQ5TA78 99 aa2.94□□□□□ -1.94
FNDC3B-202ENST00000415807 KRTAP20-2Q3LI61 65 aa2.88□□□□□ -1.95
FNDC3B-202ENST00000415807 HMCN1Q96RW7 5635 aa2.85□□□□□ -1.95
FNDC3B-202ENST00000415807 KRTAP5-4Q6L8H1 288 aa2.75□□□□□ -1.97
FNDC3B-202ENST00000415807 MUC19Q7Z5P9 8384 aa2.74□□□□□ -1.97
FNDC3B-202ENST00000415807 MUC5ACP98088 5654 aa2.74□□□□□ -1.97
FNDC3B-202ENST00000415807 GPR98Q8WXG9 6306 aa2.53□□□□□ -2
FNDC3B-202ENST00000415807 KRTAP4-11Q9BYQ6 195 aa2.52□□□□□ -2.01
FNDC3B-202ENST00000415807 KRTAP5-3Q6L8H2 238 aa2.5□□□□□ -2.01
FNDC3B-202ENST00000415807 KRTAP5-2Q701N4 177 aa2.48□□□□□ -2.01
FNDC3B-202ENST00000415807 AHNAK2Q8IVF2 5795 aa2.45□□□□□ -2.02
FNDC3B-202ENST00000415807 LCE1EQ5T753 118 aa2.38□□□□□ -2.03
FNDC3B-202ENST00000415807 KRTAP4-4Q9BYR3 166 aa2.38□□□□□ -2.03
FNDC3B-202ENST00000415807 KRTAP4-12Q9BQ66 201 aa2.37□□□□□ -2.03
FNDC3B-202ENST00000415807 KRTAP4-2Q9BYR5 136 aa2.37□□□□□ -2.03
FNDC3B-202ENST00000415807 KRTAP9-9Q9BYP9 154 aa2.31□□□□□ -2.04
FNDC3B-202ENST00000415807 MUC5BQ9HC84 5762 aaPredicted RBP2.3□□□□□ -2.04
FNDC3B-202ENST00000415807 LCE1CQ5T751 118 aa2.28□□□□□ -2.05
FNDC3B-202ENST00000415807 LCE1FQ5T754 118 aa2.28□□□□□ -2.05
FNDC3B-202ENST00000415807 KRTAP5-8O75690 187 aa2.27□□□□□ -2.05
FNDC3B-202ENST00000415807 KRTAP5-1Q6L8H4 278 aa2.24□□□□□ -2.05
FNDC3B-202ENST00000415807 KRTAP5-10Q6L8G5 202 aa2.19□□□□□ -2.06
FNDC3B-202ENST00000415807 KRTAP21-2Q3LI59 83 aa2.04□□□□□ -2.08
FNDC3B-202ENST00000415807 AHNAKQ09666 5890 aaKnown RBP1.97□□□□□ -2.09
FNDC3B-202ENST00000415807 KRTAP5-11Q6L8G4 156 aa1.92□□□□□ -2.1
FNDC3B-202ENST00000415807 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.89□□□□□ -2.11
FNDC3B-202ENST00000415807 KRTAP5-7Q6L8G8 165 aa1.85□□□□□ -2.11
FNDC3B-202ENST00000415807 PHGR1C9JFL3 82 aa1.67□□□□□ -2.14
FNDC3B-202ENST00000415807 KRTAP21-1Q3LI58 79 aa1.56□□□□□ -2.16
FNDC3B-202ENST00000415807 MUC16Q8WXI7 14507 aa1.08□□□□□ -2.24
Retrieved 77 of 20,778 RNA–protein pairs in 7 ms