RNA–Protein interactions for RNA: ENST00000415585.6

CSTF2-203, Transcript of cleavage stimulation factor subunit 2, humanhuman

TSL 1 (best) BASIC

Gene CSTF2, Length 2,074 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF2-203ENST00000415585 MT1LQ93083 61 aa4.62□□□□□ -1.67
CSTF2-203ENST00000415585 KRTAP19-4Q3LI73 84 aa4.61□□□□□ -1.67
CSTF2-203ENST00000415585 KRTAP2-3P0C7H8 128 aa4.54□□□□□ -1.68
CSTF2-203ENST00000415585 KRTAP2-4Q9BYR9 128 aa4.54□□□□□ -1.68
CSTF2-203ENST00000415585 KRTAP2-1Q9BYU5 128 aa4.54□□□□□ -1.68
CSTF2-203ENST00000415585 CRCT1Q9UGL9 99 aa4.52□□□□□ -1.69
CSTF2-203ENST00000415585 MACF1Q9UPN3 7388 aaKnown RBP4.44□□□□□ -1.7
CSTF2-203ENST00000415585 KRTAP9-6A0A140TA67 174 aa4.36□□□□□ -1.71
CSTF2-203ENST00000415585 KRTAP4-3Q9BYR4 195 aa4.36□□□□□ -1.71
CSTF2-203ENST00000415585 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.35□□□□□ -1.71
CSTF2-203ENST00000415585 MUC12Q9UKN1 5478 aa4.34□□□□□ -1.71
CSTF2-203ENST00000415585 SYNE2Q8WXH0 6885 aaKnown RBP4.33□□□□□ -1.72
CSTF2-203ENST00000415585 KRTAP19-3Q7Z4W3 81 aa4.32□□□□□ -1.72
CSTF2-203ENST00000415585 MT1MQ8N339 61 aa4.31□□□□□ -1.72
CSTF2-203ENST00000415585 MT1GP13640 62 aa4.31□□□□□ -1.72
CSTF2-203ENST00000415585 SPRR2FQ96RM1 72 aa4.3□□□□□ -1.72
CSTF2-203ENST00000415585 KRTAP4-12Q9BQ66 201 aa4.26□□□□□ -1.73
CSTF2-203ENST00000415585 KRTAP5-9P26371 169 aa4.19□□□□□ -1.74
CSTF2-203ENST00000415585 LCE3BQ5TA77 95 aa4.19□□□□□ -1.74
CSTF2-203ENST00000415585 LCE5AQ5TCM9 118 aa4.17□□□□□ -1.74
CSTF2-203ENST00000415585 MDN1Q9NU22 5596 aa4.13□□□□□ -1.75
CSTF2-203ENST00000415585 KRTAP9-9Q9BYP9 154 aa4.13□□□□□ -1.75
CSTF2-203ENST00000415585 KRTAP9-4Q9BYQ2 154 aa4.13□□□□□ -1.75
CSTF2-203ENST00000415585 LCE1AQ5T7P2 110 aa4.11□□□□□ -1.75
CSTF2-203ENST00000415585 KRTAP6-3Q3LI67 103 aa4.07□□□□□ -1.76
CSTF2-203ENST00000415585 DSTQ03001 7570 aaKnown RBP4.06□□□□□ -1.76
CSTF2-203ENST00000415585 SPRR2EP22531 72 aa4.04□□□□□ -1.76
CSTF2-203ENST00000415585 SPRR2BP35325 72 aa4.04□□□□□ -1.76
CSTF2-203ENST00000415585 SPRR2AP35326 72 aa4.04□□□□□ -1.76
CSTF2-203ENST00000415585 LCE4AQ5TA78 99 aa4.02□□□□□ -1.77
CSTF2-203ENST00000415585 KRTAP12-4P60329 112 aa4□□□□□ -1.77
CSTF2-203ENST00000415585 KRTAP9-7A8MTY7 169 aa3.92□□□□□ -1.78
CSTF2-203ENST00000415585 KRTAP6-1Q3LI64 71 aa3.92□□□□□ -1.78
CSTF2-203ENST00000415585 LCE1DQ5T752 114 aa3.91□□□□□ -1.78
CSTF2-203ENST00000415585 KRTAP4-9Q9BYQ8 210 aa3.89□□□□□ -1.79
CSTF2-203ENST00000415585 MT1AP04731 61 aa3.88□□□□□ -1.79
CSTF2-203ENST00000415585 SPRR2DP22532 72 aa3.88□□□□□ -1.79
CSTF2-203ENST00000415585 SYNE1Q8NF91 8797 aaKnown RBP3.83□□□□□ -1.8
CSTF2-203ENST00000415585 KRTAP5-5Q701N2 237 aaPredicted RBP3.82□□□□□ -1.8
CSTF2-203ENST00000415585 NEBP20929 6669 aa3.8□□□□□ -1.8
CSTF2-203ENST00000415585 LCE3DQ9BYE3 92 aa3.75□□□□□ -1.81
CSTF2-203ENST00000415585 LCE3EQ5T5B0 92 aa3.71□□□□□ -1.82
CSTF2-203ENST00000415585 KRTAP4-2Q9BYR5 136 aa3.71□□□□□ -1.82
CSTF2-203ENST00000415585 KRTAP4-11Q9BYQ6 195 aa3.68□□□□□ -1.82
CSTF2-203ENST00000415585 KRTAP5-3Q6L8H2 238 aa3.64□□□□□ -1.83
CSTF2-203ENST00000415585 PRM1P04553 51 aa3.54□□□□□ -1.84
CSTF2-203ENST00000415585 KRTAP5-4Q6L8H1 288 aa3.53□□□□□ -1.84
CSTF2-203ENST00000415585 KRTAP6-2Q3LI66 62 aa3.51□□□□□ -1.85
CSTF2-203ENST00000415585 MT3P25713 68 aa3.48□□□□□ -1.85
CSTF2-203ENST00000415585 KRTAP2-2Q9BYT5 123 aa3.47□□□□□ -1.85
CSTF2-203ENST00000415585 KRTAP20-1Q3LI63 56 aa3.45□□□□□ -1.86
CSTF2-203ENST00000415585 MT4P47944 62 aa3.42□□□□□ -1.86
CSTF2-203ENST00000415585 OBSCNQ5VST9 7968 aa3.31□□□□□ -1.88
CSTF2-203ENST00000415585 KRTAP20-2Q3LI61 65 aa3.31□□□□□ -1.88
CSTF2-203ENST00000415585 HMCN1Q96RW7 5635 aa3.28□□□□□ -1.88
CSTF2-203ENST00000415585 KRTAP5-2Q701N4 177 aa3.21□□□□□ -1.89
CSTF2-203ENST00000415585 GPR98Q8WXG9 6306 aa3.03□□□□□ -1.92
CSTF2-203ENST00000415585 MUC5ACP98088 5654 aa2.91□□□□□ -1.94
CSTF2-203ENST00000415585 LCE1EQ5T753 118 aa2.87□□□□□ -1.95
CSTF2-203ENST00000415585 AHNAK2Q8IVF2 5795 aa2.81□□□□□ -1.96
CSTF2-203ENST00000415585 KRTAP5-1Q6L8H4 278 aa2.8□□□□□ -1.96
CSTF2-203ENST00000415585 LCE1BQ5T7P3 118 aa2.8□□□□□ -1.96
CSTF2-203ENST00000415585 KRTAP5-8O75690 187 aa2.76□□□□□ -1.97
CSTF2-203ENST00000415585 KRTAP5-10Q6L8G5 202 aa2.75□□□□□ -1.97
CSTF2-203ENST00000415585 LCE1CQ5T751 118 aa2.69□□□□□ -1.98
CSTF2-203ENST00000415585 KRTAP5-7Q6L8G8 165 aa2.63□□□□□ -1.99
CSTF2-203ENST00000415585 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.61□□□□□ -1.99
CSTF2-203ENST00000415585 KRTAP21-2Q3LI59 83 aa2.53□□□□□ -2
CSTF2-203ENST00000415585 KRTAP5-11Q6L8G4 156 aa2.51□□□□□ -2.01
CSTF2-203ENST00000415585 LCE1FQ5T754 118 aa2.46□□□□□ -2.01
CSTF2-203ENST00000415585 MUC5BQ9HC84 5762 aaPredicted RBP2.38□□□□□ -2.03
CSTF2-203ENST00000415585 AHNAKQ09666 5890 aaKnown RBP2.35□□□□□ -2.03
CSTF2-203ENST00000415585 KRTAP4-4Q9BYR3 166 aa2.3□□□□□ -2.04
CSTF2-203ENST00000415585 KRTAP21-1Q3LI58 79 aa2.23□□□□□ -2.05
CSTF2-203ENST00000415585 MUC19Q7Z5P9 8384 aa2.13□□□□□ -2.07
CSTF2-203ENST00000415585 PHGR1C9JFL3 82 aa2.02□□□□□ -2.09
CSTF2-203ENST00000415585 MUC16Q8WXI7 14507 aa1.38□□□□□ -2.19
Retrieved 77 of 20,778 RNA–protein pairs in 1438.2 ms