RNA–Protein interactions for RNA: ENST00000414142.5

SNHG17-202, Transcript of small nucleolar RNA host gene 17, humanhuman

TSL 2

Gene SNHG17, Length 2,102 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG17-202ENST00000414142 MACF1Q9UPN3 7388 aaKnown RBP4.77□□□□□ -1.65
SNHG17-202ENST00000414142 KRTAP4-7Q9BYR0 210 aa4.76□□□□□ -1.65
SNHG17-202ENST00000414142 SPRR2FQ96RM1 72 aa4.72□□□□□ -1.65
SNHG17-202ENST00000414142 KRTAP19-3Q7Z4W3 81 aa4.68□□□□□ -1.66
SNHG17-202ENST00000414142 MUC12Q9UKN1 5478 aa4.67□□□□□ -1.66
SNHG17-202ENST00000414142 MT1GP13640 62 aa4.66□□□□□ -1.66
SNHG17-202ENST00000414142 KRTAP9-6A8MVA2 160 aa4.64□□□□□ -1.67
SNHG17-202ENST00000414142 SYNE2Q8WXH0 6885 aaKnown RBP4.62□□□□□ -1.67
SNHG17-202ENST00000414142 MT1MQ8N339 61 aa4.62□□□□□ -1.67
SNHG17-202ENST00000414142 KRTAP4-3Q9BYR4 195 aa4.58□□□□□ -1.68
SNHG17-202ENST00000414142 LCE5AQ5TCM9 118 aa4.57□□□□□ -1.68
SNHG17-202ENST00000414142 KRTAP5-9P26371 169 aa4.54□□□□□ -1.68
SNHG17-202ENST00000414142 KRTAP9-6A0A140TA67 174 aa4.49□□□□□ -1.69
SNHG17-202ENST00000414142 LOC100996750A0A140TA64 210 aa4.46□□□□□ -1.69
SNHG17-202ENST00000414142 KRTAP2-3P0C7H8 128 aa4.46□□□□□ -1.69
SNHG17-202ENST00000414142 KRTAP2-4Q9BYR9 128 aa4.46□□□□□ -1.69
SNHG17-202ENST00000414142 KRTAP2-1Q9BYU5 128 aa4.46□□□□□ -1.69
SNHG17-202ENST00000414142 LCE1AQ5T7P2 110 aa4.46□□□□□ -1.7
SNHG17-202ENST00000414142 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.45□□□□□ -1.7
SNHG17-202ENST00000414142 SPRR2EP22531 72 aa4.43□□□□□ -1.7
SNHG17-202ENST00000414142 SPRR2BP35325 72 aa4.43□□□□□ -1.7
SNHG17-202ENST00000414142 SPRR2AP35326 72 aa4.43□□□□□ -1.7
SNHG17-202ENST00000414142 MDN1Q9NU22 5596 aa4.41□□□□□ -1.7
SNHG17-202ENST00000414142 KRTAP6-3Q3LI67 103 aa4.4□□□□□ -1.71
SNHG17-202ENST00000414142 DSTQ03001 7570 aaKnown RBP4.37□□□□□ -1.71
SNHG17-202ENST00000414142 SPRR2DP22532 72 aa4.26□□□□□ -1.73
SNHG17-202ENST00000414142 KRTAP9-7A8MTY7 169 aa4.15□□□□□ -1.74
SNHG17-202ENST00000414142 KRTAP5-5Q701N2 237 aaPredicted RBP4.11□□□□□ -1.75
SNHG17-202ENST00000414142 MT1AP04731 61 aa4.1□□□□□ -1.75
SNHG17-202ENST00000414142 NEBP20929 6669 aa4.1□□□□□ -1.75
SNHG17-202ENST00000414142 KRTAP6-1Q3LI64 71 aa4.09□□□□□ -1.75
SNHG17-202ENST00000414142 KRTAP2-2Q9BYT5 123 aa4.07□□□□□ -1.76
SNHG17-202ENST00000414142 LCE3BQ5TA77 95 aa4.07□□□□□ -1.76
SNHG17-202ENST00000414142 SYNE1Q8NF91 8797 aaKnown RBP3.93□□□□□ -1.78
SNHG17-202ENST00000414142 KRTAP9-4Q9BYQ2 154 aa3.89□□□□□ -1.79
SNHG17-202ENST00000414142 KRTAP12-4P60329 112 aa3.88□□□□□ -1.79
SNHG17-202ENST00000414142 KRTAP4-9Q9BYQ8 210 aa3.86□□□□□ -1.79
SNHG17-202ENST00000414142 KRTAP5-4Q6L8H1 288 aa3.83□□□□□ -1.8
SNHG17-202ENST00000414142 KRTAP6-2Q3LI66 62 aa3.74□□□□□ -1.81
SNHG17-202ENST00000414142 LCE3DQ9BYE3 92 aa3.74□□□□□ -1.81
SNHG17-202ENST00000414142 LCE4AQ5TA78 99 aa3.74□□□□□ -1.81
SNHG17-202ENST00000414142 MT3P25713 68 aa3.72□□□□□ -1.81
SNHG17-202ENST00000414142 MT4P47944 62 aa3.72□□□□□ -1.81
SNHG17-202ENST00000414142 KRTAP20-1Q3LI63 56 aa3.7□□□□□ -1.82
SNHG17-202ENST00000414142 KRTAP4-6Q9BYQ5 205 aa3.69□□□□□ -1.82
SNHG17-202ENST00000414142 LCE3EQ5T5B0 92 aa3.68□□□□□ -1.82
SNHG17-202ENST00000414142 KRTAP20-2Q3LI61 65 aa3.61□□□□□ -1.83
SNHG17-202ENST00000414142 LCE1EQ5T753 118 aa3.59□□□□□ -1.83
SNHG17-202ENST00000414142 LCE1DQ5T752 114 aa3.59□□□□□ -1.84
SNHG17-202ENST00000414142 LCE1FQ5T754 118 aa3.55□□□□□ -1.84
SNHG17-202ENST00000414142 HMCN1Q96RW7 5635 aa3.54□□□□□ -1.84
SNHG17-202ENST00000414142 KRTAP5-2Q701N4 177 aa3.5□□□□□ -1.85
SNHG17-202ENST00000414142 OBSCNQ5VST9 7968 aa3.45□□□□□ -1.86
SNHG17-202ENST00000414142 KRTAP5-3Q6L8H2 238 aa3.45□□□□□ -1.86
SNHG17-202ENST00000414142 PRM1P04553 51 aa3.4□□□□□ -1.87
SNHG17-202ENST00000414142 KRTAP4-11Q9BYQ6 195 aa3.08□□□□□ -1.92
SNHG17-202ENST00000414142 AHNAK2Q8IVF2 5795 aa3.06□□□□□ -1.92
SNHG17-202ENST00000414142 LCE1BQ5T7P3 118 aa3.05□□□□□ -1.92
SNHG17-202ENST00000414142 KRTAP9-9Q9BYP9 154 aa3.02□□□□□ -1.93
SNHG17-202ENST00000414142 KRTAP5-1Q6L8H4 278 aa3.02□□□□□ -1.93
SNHG17-202ENST00000414142 MUC5ACP98088 5654 aa3.01□□□□□ -1.93
SNHG17-202ENST00000414142 GPR98Q8WXG9 6306 aa3.01□□□□□ -1.93
SNHG17-202ENST00000414142 KRTAP5-10Q6L8G5 202 aa2.96□□□□□ -1.93
SNHG17-202ENST00000414142 KRTAP5-8O75690 187 aa2.96□□□□□ -1.94
SNHG17-202ENST00000414142 LCE1CQ5T751 118 aa2.95□□□□□ -1.94
SNHG17-202ENST00000414142 KRTAP4-2Q9BYR5 136 aa2.95□□□□□ -1.94
SNHG17-202ENST00000414142 KRTAP5-7Q6L8G8 165 aa2.86□□□□□ -1.95
SNHG17-202ENST00000414142 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.75□□□□□ -1.97
SNHG17-202ENST00000414142 KRTAP4-12Q9BQ66 201 aa2.75□□□□□ -1.97
SNHG17-202ENST00000414142 KRTAP21-2Q3LI59 83 aa2.66□□□□□ -1.98
SNHG17-202ENST00000414142 KRTAP5-11Q6L8G4 156 aa2.57□□□□□ -2
SNHG17-202ENST00000414142 MUC5BQ9HC84 5762 aaPredicted RBP2.53□□□□□ -2
SNHG17-202ENST00000414142 KRTAP4-4Q9BYR3 166 aa2.42□□□□□ -2.02
SNHG17-202ENST00000414142 AHNAKQ09666 5890 aaKnown RBP2.32□□□□□ -2.04
SNHG17-202ENST00000414142 KRTAP21-1Q3LI58 79 aa2.26□□□□□ -2.05
SNHG17-202ENST00000414142 MUC19Q7Z5P9 8384 aa2.25□□□□□ -2.05
SNHG17-202ENST00000414142 PHGR1C9JFL3 82 aa2.22□□□□□ -2.05
SNHG17-202ENST00000414142 MUC16Q8WXI7 14507 aa1.49□□□□□ -2.17
Retrieved 78 of 20,778 RNA–protein pairs in 10.1 ms