RNA–Protein interactions for RNA: ENST00000413146.6

TNFRSF8-202, Transcript of TNF receptor superfamily member 8, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF8, Length 2,363 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF8-202ENST00000413146 KRTAP9-2Q9BYQ4 174 aa6.5□□□□□ -1.37
TNFRSF8-202ENST00000413146 FSIP2Q5CZC0 6907 aa6.36□□□□□ -1.39
TNFRSF8-202ENST00000413146 FCGBPQ9Y6R7 5405 aaPredicted RBP6.28□□□□□ -1.4
TNFRSF8-202ENST00000413146 CRCT1Q9UGL9 99 aa6.28□□□□□ -1.4
TNFRSF8-202ENST00000413146 KRTAP4-3Q9BYR4 195 aa6.17□□□□□ -1.42
TNFRSF8-202ENST00000413146 LOC100996750A0A140TA64 210 aa6.16□□□□□ -1.42
TNFRSF8-202ENST00000413146 MT1GP13640 62 aa6.13□□□□□ -1.43
TNFRSF8-202ENST00000413146 MT1MQ8N339 61 aa6.11□□□□□ -1.43
TNFRSF8-202ENST00000413146 KRTAP19-3Q7Z4W3 81 aa6.11□□□□□ -1.43
TNFRSF8-202ENST00000413146 MUC12Q9UKN1 5478 aa5.99□□□□□ -1.45
TNFRSF8-202ENST00000413146 KRTAP9-6A0A140TA67 174 aa5.96□□□□□ -1.45
TNFRSF8-202ENST00000413146 SPRR2FQ96RM1 72 aa5.91□□□□□ -1.46
TNFRSF8-202ENST00000413146 MACF1Q9UPN3 7388 aaKnown RBP5.88□□□□□ -1.47
TNFRSF8-202ENST00000413146 KRTAP2-2Q9BYT5 123 aa5.88□□□□□ -1.47
TNFRSF8-202ENST00000413146 LCE5AQ5TCM9 118 aa5.87□□□□□ -1.47
TNFRSF8-202ENST00000413146 KRTAP5-9P26371 169 aa5.82□□□□□ -1.48
TNFRSF8-202ENST00000413146 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.81□□□□□ -1.48
TNFRSF8-202ENST00000413146 KRTAP12-4P60329 112 aa5.8□□□□□ -1.48
TNFRSF8-202ENST00000413146 DSTQ03001 7570 aaKnown RBP5.71□□□□□ -1.5
TNFRSF8-202ENST00000413146 KRTAP6-3Q3LI67 103 aa5.71□□□□□ -1.5
TNFRSF8-202ENST00000413146 LCE3BQ5TA77 95 aa5.71□□□□□ -1.5
TNFRSF8-202ENST00000413146 SYNE2Q8WXH0 6885 aaKnown RBP5.67□□□□□ -1.5
TNFRSF8-202ENST00000413146 LCE1AQ5T7P2 110 aa5.65□□□□□ -1.51
TNFRSF8-202ENST00000413146 SPRR2EP22531 72 aa5.6□□□□□ -1.51
TNFRSF8-202ENST00000413146 SPRR2BP35325 72 aa5.6□□□□□ -1.51
TNFRSF8-202ENST00000413146 SPRR2AP35326 72 aa5.6□□□□□ -1.51
TNFRSF8-202ENST00000413146 KRTAP6-1Q3LI64 71 aa5.56□□□□□ -1.52
TNFRSF8-202ENST00000413146 KRTAP4-9Q9BYQ8 210 aa5.56□□□□□ -1.52
TNFRSF8-202ENST00000413146 MT1AP04731 61 aa5.56□□□□□ -1.52
TNFRSF8-202ENST00000413146 MDN1Q9NU22 5596 aa5.48□□□□□ -1.53
TNFRSF8-202ENST00000413146 KRTAP9-7A8MTY7 169 aa5.47□□□□□ -1.53
TNFRSF8-202ENST00000413146 LCE3DQ9BYE3 92 aa5.41□□□□□ -1.54
TNFRSF8-202ENST00000413146 SYNE1Q8NF91 8797 aaKnown RBP5.4□□□□□ -1.55
TNFRSF8-202ENST00000413146 SPRR2DP22532 72 aa5.4□□□□□ -1.55
TNFRSF8-202ENST00000413146 KRTAP5-5Q701N2 237 aaPredicted RBP5.37□□□□□ -1.55
TNFRSF8-202ENST00000413146 LCE3EQ5T5B0 92 aa5.35□□□□□ -1.55
TNFRSF8-202ENST00000413146 LCE1FQ5T754 118 aa5.33□□□□□ -1.56
TNFRSF8-202ENST00000413146 LCE1EQ5T753 118 aa5.22□□□□□ -1.57
TNFRSF8-202ENST00000413146 KRTAP9-4Q9BYQ2 154 aa5.19□□□□□ -1.58
TNFRSF8-202ENST00000413146 NEBP20929 6669 aa5.18□□□□□ -1.58
TNFRSF8-202ENST00000413146 PRM1P04553 51 aa5.15□□□□□ -1.59
TNFRSF8-202ENST00000413146 LCE1DQ5T752 114 aa5.01□□□□□ -1.61
TNFRSF8-202ENST00000413146 KRTAP6-2Q3LI66 62 aa4.98□□□□□ -1.61
TNFRSF8-202ENST00000413146 MT3P25713 68 aa4.96□□□□□ -1.62
TNFRSF8-202ENST00000413146 KRTAP5-4Q6L8H1 288 aa4.89□□□□□ -1.63
TNFRSF8-202ENST00000413146 KRTAP20-1Q3LI63 56 aa4.87□□□□□ -1.63
TNFRSF8-202ENST00000413146 KRTAP9-9Q9BYP9 154 aa4.87□□□□□ -1.63
TNFRSF8-202ENST00000413146 LCE4AQ5TA78 99 aa4.79□□□□□ -1.64
TNFRSF8-202ENST00000413146 OBSCNQ5VST9 7968 aa4.72□□□□□ -1.65
TNFRSF8-202ENST00000413146 MT4P47944 62 aa4.67□□□□□ -1.66
TNFRSF8-202ENST00000413146 KRTAP4-6Q9BYQ5 205 aa4.64□□□□□ -1.67
TNFRSF8-202ENST00000413146 KRTAP20-2Q3LI61 65 aa4.57□□□□□ -1.68
TNFRSF8-202ENST00000413146 HMCN1Q96RW7 5635 aa4.45□□□□□ -1.7
TNFRSF8-202ENST00000413146 KRTAP5-2Q701N4 177 aa4.45□□□□□ -1.7
TNFRSF8-202ENST00000413146 KRTAP5-3Q6L8H2 238 aa4.4□□□□□ -1.71
TNFRSF8-202ENST00000413146 MUC5ACP98088 5654 aa4.14□□□□□ -1.75
TNFRSF8-202ENST00000413146 LCE1BQ5T7P3 118 aa3.98□□□□□ -1.77
TNFRSF8-202ENST00000413146 KRTAP4-11Q9BYQ6 195 aa3.94□□□□□ -1.78
TNFRSF8-202ENST00000413146 KRTAP5-10Q6L8G5 202 aa3.93□□□□□ -1.78
TNFRSF8-202ENST00000413146 AHNAK2Q8IVF2 5795 aa3.93□□□□□ -1.78
TNFRSF8-202ENST00000413146 KRTAP5-1Q6L8H4 278 aa3.88□□□□□ -1.79
TNFRSF8-202ENST00000413146 KRTAP5-8O75690 187 aa3.8□□□□□ -1.8
TNFRSF8-202ENST00000413146 KRTAP4-2Q9BYR5 136 aa3.8□□□□□ -1.8
TNFRSF8-202ENST00000413146 LCE1CQ5T751 118 aa3.79□□□□□ -1.8
TNFRSF8-202ENST00000413146 KRTAP5-7Q6L8G8 165 aa3.69□□□□□ -1.82
TNFRSF8-202ENST00000413146 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.59□□□□□ -1.83
TNFRSF8-202ENST00000413146 KRTAP21-2Q3LI59 83 aa3.58□□□□□ -1.84
TNFRSF8-202ENST00000413146 KRTAP4-12Q9BQ66 201 aa3.55□□□□□ -1.84
TNFRSF8-202ENST00000413146 GPR98Q8WXG9 6306 aa3.43□□□□□ -1.86
TNFRSF8-202ENST00000413146 MUC19Q7Z5P9 8384 aa3.37□□□□□ -1.87
TNFRSF8-202ENST00000413146 KRTAP4-4Q9BYR3 166 aa3.27□□□□□ -1.89
TNFRSF8-202ENST00000413146 KRTAP5-11Q6L8G4 156 aa3.26□□□□□ -1.89
TNFRSF8-202ENST00000413146 KRTAP21-1Q3LI58 79 aa3.24□□□□□ -1.89
TNFRSF8-202ENST00000413146 MUC5BQ9HC84 5762 aaPredicted RBP3.2□□□□□ -1.9
TNFRSF8-202ENST00000413146 AHNAKQ09666 5890 aaKnown RBP2.92□□□□□ -1.94
TNFRSF8-202ENST00000413146 PHGR1C9JFL3 82 aa2.81□□□□□ -1.96
TNFRSF8-202ENST00000413146 MUC16Q8WXI7 14507 aa1.88□□□□□ -2.11
Retrieved 77 of 20,778 RNA–protein pairs in 6 ms