RNA–Protein interactions for RNA: ENST00000412615.6

TRAFD1-202, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TRAFD1, Length 2,697 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-202ENST00000412615 KRTAP2-1Q9BYU5 128 aa3.85□□□□□ -1.79
TRAFD1-202ENST00000412615 LCE4AQ5TA78 99 aa3.82□□□□□ -1.8
TRAFD1-202ENST00000412615 FCGBPQ9Y6R7 5405 aaPredicted RBP3.81□□□□□ -1.8
TRAFD1-202ENST00000412615 MT1GP13640 62 aa3.8□□□□□ -1.8
TRAFD1-202ENST00000412615 KRTAP19-3Q7Z4W3 81 aa3.8□□□□□ -1.8
TRAFD1-202ENST00000412615 KRTAP9-4Q9BYQ2 154 aa3.78□□□□□ -1.8
TRAFD1-202ENST00000412615 KRTAP9-6A0A140TA67 174 aa3.77□□□□□ -1.81
TRAFD1-202ENST00000412615 KRTAP9-7A8MTY7 169 aa3.77□□□□□ -1.81
TRAFD1-202ENST00000412615 MT1MQ8N339 61 aa3.77□□□□□ -1.81
TRAFD1-202ENST00000412615 KRTAP4-3Q9BYR4 195 aa3.75□□□□□ -1.81
TRAFD1-202ENST00000412615 KRTAP9-9Q9BYP9 154 aa3.73□□□□□ -1.81
TRAFD1-202ENST00000412615 MUC12Q9UKN1 5478 aa3.72□□□□□ -1.81
TRAFD1-202ENST00000412615 LOC100996750A0A140TA64 210 aa3.71□□□□□ -1.82
TRAFD1-202ENST00000412615 SPRR2FQ96RM1 72 aa3.69□□□□□ -1.82
TRAFD1-202ENST00000412615 LCE5AQ5TCM9 118 aa3.68□□□□□ -1.82
TRAFD1-202ENST00000412615 CRCT1Q9UGL9 99 aa3.61□□□□□ -1.83
TRAFD1-202ENST00000412615 MACF1Q9UPN3 7388 aaKnown RBP3.6□□□□□ -1.83
TRAFD1-202ENST00000412615 KRTAP9-2Q9BYQ4 174 aa3.55□□□□□ -1.84
TRAFD1-202ENST00000412615 KRTAP2-2Q9BYT5 123 aa3.54□□□□□ -1.84
TRAFD1-202ENST00000412615 DSTQ03001 7570 aaKnown RBP3.51□□□□□ -1.85
TRAFD1-202ENST00000412615 KRTAP5-9P26371 169 aa3.49□□□□□ -1.85
TRAFD1-202ENST00000412615 SYNE2Q8WXH0 6885 aaKnown RBP3.48□□□□□ -1.85
TRAFD1-202ENST00000412615 LCE1AQ5T7P2 110 aa3.47□□□□□ -1.85
TRAFD1-202ENST00000412615 MDN1Q9NU22 5596 aa3.44□□□□□ -1.86
TRAFD1-202ENST00000412615 KRTAP4-12Q9BQ66 201 aa3.42□□□□□ -1.86
TRAFD1-202ENST00000412615 LCE3BQ5TA77 95 aa3.4□□□□□ -1.86
TRAFD1-202ENST00000412615 MT1AP04731 61 aa3.39□□□□□ -1.87
TRAFD1-202ENST00000412615 SPRR2EP22531 72 aa3.39□□□□□ -1.87
TRAFD1-202ENST00000412615 SPRR2BP35325 72 aa3.39□□□□□ -1.87
TRAFD1-202ENST00000412615 SPRR2AP35326 72 aa3.39□□□□□ -1.87
TRAFD1-202ENST00000412615 KRTAP6-1Q3LI64 71 aa3.38□□□□□ -1.87
TRAFD1-202ENST00000412615 KRTAP12-4P60329 112 aa3.38□□□□□ -1.87
TRAFD1-202ENST00000412615 KRTAP5-5Q701N2 237 aaPredicted RBP3.35□□□□□ -1.87
TRAFD1-202ENST00000412615 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.29□□□□□ -1.88
TRAFD1-202ENST00000412615 KRTAP4-6Q9BYQ5 205 aa3.29□□□□□ -1.88
TRAFD1-202ENST00000412615 KRTAP4-9Q9BYQ8 210 aa3.29□□□□□ -1.88
TRAFD1-202ENST00000412615 SPRR2DP22532 72 aa3.25□□□□□ -1.89
TRAFD1-202ENST00000412615 SYNE1Q8NF91 8797 aaKnown RBP3.25□□□□□ -1.89
TRAFD1-202ENST00000412615 KRTAP6-3Q3LI67 103 aa3.25□□□□□ -1.89
TRAFD1-202ENST00000412615 LCE3DQ9BYE3 92 aa3.22□□□□□ -1.89
TRAFD1-202ENST00000412615 LCE1EQ5T753 118 aa3.2□□□□□ -1.9
TRAFD1-202ENST00000412615 LCE1FQ5T754 118 aa3.19□□□□□ -1.9
TRAFD1-202ENST00000412615 LCE3EQ5T5B0 92 aa3.17□□□□□ -1.9
TRAFD1-202ENST00000412615 OBSCNQ5VST9 7968 aa3.08□□□□□ -1.92
TRAFD1-202ENST00000412615 MT3P25713 68 aa3.06□□□□□ -1.92
TRAFD1-202ENST00000412615 LCE1DQ5T752 114 aa3.06□□□□□ -1.92
TRAFD1-202ENST00000412615 KRTAP6-2Q3LI66 62 aa3.06□□□□□ -1.92
TRAFD1-202ENST00000412615 KRTAP5-4Q6L8H1 288 aa3□□□□□ -1.93
TRAFD1-202ENST00000412615 NEBP20929 6669 aa2.99□□□□□ -1.93
TRAFD1-202ENST00000412615 PRM1P04553 51 aa2.96□□□□□ -1.94
TRAFD1-202ENST00000412615 MT4P47944 62 aa2.84□□□□□ -1.95
TRAFD1-202ENST00000412615 KRTAP4-11Q9BYQ6 195 aa2.83□□□□□ -1.96
TRAFD1-202ENST00000412615 KRTAP20-2Q3LI61 65 aa2.81□□□□□ -1.96
TRAFD1-202ENST00000412615 KRTAP5-2Q701N4 177 aa2.79□□□□□ -1.96
TRAFD1-202ENST00000412615 KRTAP20-1Q3LI63 56 aa2.7□□□□□ -1.98
TRAFD1-202ENST00000412615 HMCN1Q96RW7 5635 aa2.69□□□□□ -1.98
TRAFD1-202ENST00000412615 KRTAP5-3Q6L8H2 238 aa2.68□□□□□ -1.98
TRAFD1-202ENST00000412615 KRTAP4-2Q9BYR5 136 aa2.65□□□□□ -1.98
TRAFD1-202ENST00000412615 MUC5ACP98088 5654 aa2.52□□□□□ -2.01
TRAFD1-202ENST00000412615 LCE1BQ5T7P3 118 aa2.45□□□□□ -2.02
TRAFD1-202ENST00000412615 KRTAP5-10Q6L8G5 202 aa2.39□□□□□ -2.03
TRAFD1-202ENST00000412615 LCE1CQ5T751 118 aa2.39□□□□□ -2.03
TRAFD1-202ENST00000412615 KRTAP5-1Q6L8H4 278 aa2.36□□□□□ -2.03
TRAFD1-202ENST00000412615 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.25□□□□□ -2.05
TRAFD1-202ENST00000412615 KRTAP5-8O75690 187 aa2.24□□□□□ -2.05
TRAFD1-202ENST00000412615 KRTAP5-7Q6L8G8 165 aa2.22□□□□□ -2.05
TRAFD1-202ENST00000412615 KRTAP21-2Q3LI59 83 aa2.2□□□□□ -2.06
TRAFD1-202ENST00000412615 AHNAK2Q8IVF2 5795 aa2.17□□□□□ -2.06
TRAFD1-202ENST00000412615 MUC19Q7Z5P9 8384 aa2.13□□□□□ -2.07
TRAFD1-202ENST00000412615 KRTAP5-11Q6L8G4 156 aa2.06□□□□□ -2.08
TRAFD1-202ENST00000412615 GPR98Q8WXG9 6306 aa2.05□□□□□ -2.08
TRAFD1-202ENST00000412615 MUC5BQ9HC84 5762 aaPredicted RBP2.01□□□□□ -2.09
TRAFD1-202ENST00000412615 KRTAP4-4Q9BYR3 166 aa1.96□□□□□ -2.1
TRAFD1-202ENST00000412615 AHNAKQ09666 5890 aaKnown RBP1.88□□□□□ -2.11
TRAFD1-202ENST00000412615 KRTAP21-1Q3LI58 79 aa1.86□□□□□ -2.11
TRAFD1-202ENST00000412615 PHGR1C9JFL3 82 aa1.77□□□□□ -2.13
TRAFD1-202ENST00000412615 MUC16Q8WXI7 14507 aa1.17□□□□□ -2.22
Retrieved 77 of 20,778 RNA–protein pairs in 90 ms