RNA–Protein interactions for RNA: ENST00000411850.5

TOM1-204, Transcript of target of myb1 membrane trafficking protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TOM1, Length 2,390 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1-204ENST00000411850 KRTAP2-1Q9BYU5 128 aa5.8□□□□□ -1.48
TOM1-204ENST00000411850 FCGBPQ9Y6R7 5405 aaPredicted RBP5.75□□□□□ -1.49
TOM1-204ENST00000411850 KRTAP9-2Q9BYQ4 174 aa5.69□□□□□ -1.5
TOM1-204ENST00000411850 CRCT1Q9UGL9 99 aa5.49□□□□□ -1.53
TOM1-204ENST00000411850 KRTAP19-3Q7Z4W3 81 aa5.48□□□□□ -1.53
TOM1-204ENST00000411850 KRTAP4-3Q9BYR4 195 aa5.48□□□□□ -1.53
TOM1-204ENST00000411850 MT1MQ8N339 61 aa5.47□□□□□ -1.53
TOM1-204ENST00000411850 MT1GP13640 62 aa5.47□□□□□ -1.53
TOM1-204ENST00000411850 LOC100996750A0A140TA64 210 aa5.45□□□□□ -1.54
TOM1-204ENST00000411850 MUC12Q9UKN1 5478 aa5.43□□□□□ -1.54
TOM1-204ENST00000411850 SPRR2FQ96RM1 72 aa5.42□□□□□ -1.54
TOM1-204ENST00000411850 MACF1Q9UPN3 7388 aaKnown RBP5.38□□□□□ -1.55
TOM1-204ENST00000411850 LCE5AQ5TCM9 118 aa5.34□□□□□ -1.56
TOM1-204ENST00000411850 KRTAP5-9P26371 169 aa5.28□□□□□ -1.56
TOM1-204ENST00000411850 SYNE2Q8WXH0 6885 aaKnown RBP5.21□□□□□ -1.58
TOM1-204ENST00000411850 KRTAP9-6A0A140TA67 174 aa5.2□□□□□ -1.58
TOM1-204ENST00000411850 LCE1AQ5T7P2 110 aa5.16□□□□□ -1.58
TOM1-204ENST00000411850 MDN1Q9NU22 5596 aa5.11□□□□□ -1.59
TOM1-204ENST00000411850 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.08□□□□□ -1.6
TOM1-204ENST00000411850 KRTAP12-4P60329 112 aa5.08□□□□□ -1.6
TOM1-204ENST00000411850 SPRR2EP22531 72 aa5.06□□□□□ -1.6
TOM1-204ENST00000411850 SPRR2BP35325 72 aa5.06□□□□□ -1.6
TOM1-204ENST00000411850 SPRR2AP35326 72 aa5.06□□□□□ -1.6
TOM1-204ENST00000411850 KRTAP6-3Q3LI67 103 aa5.03□□□□□ -1.6
TOM1-204ENST00000411850 LCE3BQ5TA77 95 aa5.01□□□□□ -1.61
TOM1-204ENST00000411850 DSTQ03001 7570 aaKnown RBP5.01□□□□□ -1.61
TOM1-204ENST00000411850 MT1AP04731 61 aa4.97□□□□□ -1.61
TOM1-204ENST00000411850 KRTAP6-1Q3LI64 71 aa4.95□□□□□ -1.62
TOM1-204ENST00000411850 KRTAP4-9Q9BYQ8 210 aa4.88□□□□□ -1.63
TOM1-204ENST00000411850 SPRR2DP22532 72 aa4.86□□□□□ -1.63
TOM1-204ENST00000411850 KRTAP5-5Q701N2 237 aaPredicted RBP4.86□□□□□ -1.63
TOM1-204ENST00000411850 KRTAP9-7A8MTY7 169 aa4.78□□□□□ -1.64
TOM1-204ENST00000411850 LCE3DQ9BYE3 92 aa4.77□□□□□ -1.65
TOM1-204ENST00000411850 LCE3EQ5T5B0 92 aa4.72□□□□□ -1.65
TOM1-204ENST00000411850 SYNE1Q8NF91 8797 aaKnown RBP4.71□□□□□ -1.66
TOM1-204ENST00000411850 KRTAP9-4Q9BYQ2 154 aa4.64□□□□□ -1.67
TOM1-204ENST00000411850 NEBP20929 6669 aa4.61□□□□□ -1.67
TOM1-204ENST00000411850 KRTAP2-2Q9BYT5 123 aa4.5□□□□□ -1.69
TOM1-204ENST00000411850 PRM1P04553 51 aa4.49□□□□□ -1.69
TOM1-204ENST00000411850 KRTAP5-4Q6L8H1 288 aa4.48□□□□□ -1.69
TOM1-204ENST00000411850 MT3P25713 68 aa4.43□□□□□ -1.7
TOM1-204ENST00000411850 KRTAP6-2Q3LI66 62 aa4.43□□□□□ -1.7
TOM1-204ENST00000411850 LCE4AQ5TA78 99 aa4.3□□□□□ -1.72
TOM1-204ENST00000411850 KRTAP4-6Q9BYQ5 205 aa4.25□□□□□ -1.73
TOM1-204ENST00000411850 MT4P47944 62 aa4.22□□□□□ -1.73
TOM1-204ENST00000411850 KRTAP20-1Q3LI63 56 aa4.22□□□□□ -1.73
TOM1-204ENST00000411850 KRTAP20-2Q3LI61 65 aa4.18□□□□□ -1.74
TOM1-204ENST00000411850 LCE1FQ5T754 118 aa4.14□□□□□ -1.75
TOM1-204ENST00000411850 KRTAP5-2Q701N4 177 aa4.12□□□□□ -1.75
TOM1-204ENST00000411850 LCE1DQ5T752 114 aa4.11□□□□□ -1.75
TOM1-204ENST00000411850 OBSCNQ5VST9 7968 aa4.09□□□□□ -1.76
TOM1-204ENST00000411850 HMCN1Q96RW7 5635 aa4.08□□□□□ -1.76
TOM1-204ENST00000411850 KRTAP5-3Q6L8H2 238 aa4.02□□□□□ -1.77
TOM1-204ENST00000411850 LCE1EQ5T753 118 aa3.97□□□□□ -1.77
TOM1-204ENST00000411850 KRTAP9-9Q9BYP9 154 aa3.89□□□□□ -1.79
TOM1-204ENST00000411850 MUC5ACP98088 5654 aa3.68□□□□□ -1.82
TOM1-204ENST00000411850 KRTAP4-11Q9BYQ6 195 aa3.55□□□□□ -1.84
TOM1-204ENST00000411850 KRTAP5-1Q6L8H4 278 aa3.53□□□□□ -1.84
TOM1-204ENST00000411850 LCE1BQ5T7P3 118 aa3.51□□□□□ -1.85
TOM1-204ENST00000411850 KRTAP5-10Q6L8G5 202 aa3.5□□□□□ -1.85
TOM1-204ENST00000411850 AHNAK2Q8IVF2 5795 aa3.46□□□□□ -1.86
TOM1-204ENST00000411850 LCE1CQ5T751 118 aa3.46□□□□□ -1.86
TOM1-204ENST00000411850 KRTAP4-2Q9BYR5 136 aa3.46□□□□□ -1.86
TOM1-204ENST00000411850 KRTAP5-8O75690 187 aa3.42□□□□□ -1.86
TOM1-204ENST00000411850 KRTAP5-7Q6L8G8 165 aa3.36□□□□□ -1.87
TOM1-204ENST00000411850 GPR98Q8WXG9 6306 aa3.35□□□□□ -1.87
TOM1-204ENST00000411850 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.27□□□□□ -1.89
TOM1-204ENST00000411850 KRTAP21-2Q3LI59 83 aa3.21□□□□□ -1.9
TOM1-204ENST00000411850 KRTAP5-11Q6L8G4 156 aa3.02□□□□□ -1.93
TOM1-204ENST00000411850 MUC5BQ9HC84 5762 aaPredicted RBP2.91□□□□□ -1.94
TOM1-204ENST00000411850 KRTAP21-1Q3LI58 79 aa2.86□□□□□ -1.95
TOM1-204ENST00000411850 KRTAP4-4Q9BYR3 166 aa2.86□□□□□ -1.95
TOM1-204ENST00000411850 KRTAP4-12Q9BQ66 201 aa2.8□□□□□ -1.96
TOM1-204ENST00000411850 AHNAKQ09666 5890 aaKnown RBP2.68□□□□□ -1.98
TOM1-204ENST00000411850 MUC19Q7Z5P9 8384 aa2.62□□□□□ -1.99
TOM1-204ENST00000411850 PHGR1C9JFL3 82 aa2.59□□□□□ -1.99
TOM1-204ENST00000411850 MUC16Q8WXI7 14507 aa1.68□□□□□ -2.14
Retrieved 77 of 20,778 RNA–protein pairs in 58.2 ms