RNA–Protein interactions for RNA: ENST00000411767.6

PTPN13-202, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 8,119 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-202ENST00000411767 KRTAP19-8Q3LI54 63 aa1.4□□□□□ -2.19
PTPN13-202ENST00000411767 FLGP20930 4061 aaPredicted RBP1.4□□□□□ -2.19
PTPN13-202ENST00000411767 MT1FP04733 61 aa1.4□□□□□ -2.19
PTPN13-202ENST00000411767 MT1LQ93083 61 aa1.4□□□□□ -2.19
PTPN13-202ENST00000411767 LCE4AQ5TA78 99 aa1.39□□□□□ -2.19
PTPN13-202ENST00000411767 KRTAP4-1Q9BYQ7 146 aa1.37□□□□□ -2.19
PTPN13-202ENST00000411767 MT4P47944 62 aa1.36□□□□□ -2.19
PTPN13-202ENST00000411767 KRTAP19-3Q7Z4W3 81 aa1.36□□□□□ -2.19
PTPN13-202ENST00000411767 MT1EP04732 61 aa1.33□□□□□ -2.2
PTPN13-202ENST00000411767 MT1XP80297 61 aa1.31□□□□□ -2.2
PTPN13-202ENST00000411767 LCE2AQ5TA79 106 aaPredicted RBP1.31□□□□□ -2.2
PTPN13-202ENST00000411767 MT1MQ8N339 61 aa1.27□□□□□ -2.21
PTPN13-202ENST00000411767 MT1AP04731 61 aa1.27□□□□□ -2.21
PTPN13-202ENST00000411767 MT1BP07438 61 aa1.27□□□□□ -2.21
PTPN13-202ENST00000411767 KRTAP19-1Q8IUB9 90 aa1.26□□□□□ -2.21
PTPN13-202ENST00000411767 KRTAP9-8Q9BYQ0 159 aa1.25□□□□□ -2.21
PTPN13-202ENST00000411767 KMT2DO14686 5537 aa1.24□□□□□ -2.21
PTPN13-202ENST00000411767 GPR98Q8WXG9 6306 aa1.24□□□□□ -2.21
PTPN13-202ENST00000411767 KRTAP9-6A0A140TA67 174 aa1.24□□□□□ -2.21
PTPN13-202ENST00000411767 KRTAP9-7A8MTY7 169 aa1.24□□□□□ -2.21
PTPN13-202ENST00000411767 KRTAP20-1Q3LI63 56 aa1.23□□□□□ -2.21
PTPN13-202ENST00000411767 KRTAP19-7Q3SYF9 63 aa1.23□□□□□ -2.21
PTPN13-202ENST00000411767 KRTAP6-2Q3LI66 62 aa1.22□□□□□ -2.21
PTPN13-202ENST00000411767 KRTAP2-3P0C7H8 128 aa1.21□□□□□ -2.22
PTPN13-202ENST00000411767 KRTAP2-4Q9BYR9 128 aa1.21□□□□□ -2.22
PTPN13-202ENST00000411767 KRTAP2-2Q9BYT5 123 aa1.21□□□□□ -2.22
PTPN13-202ENST00000411767 KRTAP2-1Q9BYU5 128 aa1.21□□□□□ -2.22
PTPN13-202ENST00000411767 KRTAP9-9Q9BYP9 154 aa1.2□□□□□ -2.22
PTPN13-202ENST00000411767 KRTAP9-3Q9BYQ3 159 aa1.19□□□□□ -2.22
PTPN13-202ENST00000411767 KRTAP19-6Q3LI70 58 aa1.15□□□□□ -2.22
PTPN13-202ENST00000411767 KRTAP4-8A0A0G2JLE6 195 aa1.15□□□□□ -2.23
PTPN13-202ENST00000411767 KRTAP4-8Q9BYQ9 185 aa1.15□□□□□ -2.23
PTPN13-202ENST00000411767 KRTAP9-4Q9BYQ2 154 aa1.12□□□□□ -2.23
PTPN13-202ENST00000411767 LOC100996750A0A140TA64 210 aa1.11□□□□□ -2.23
PTPN13-202ENST00000411767 KRTAP4-6Q9BYQ5 205 aa1.11□□□□□ -2.23
PTPN13-202ENST00000411767 MUC12Q9UKN1 5478 aa1.11□□□□□ -2.23
PTPN13-202ENST00000411767 KRTAP20-2Q3LI61 65 aa1.1□□□□□ -2.23
PTPN13-202ENST00000411767 KRTAP9-2Q9BYQ4 174 aa1.09□□□□□ -2.23
PTPN13-202ENST00000411767 KRTAP4-7Q9BYR0 210 aa1.09□□□□□ -2.23
PTPN13-202ENST00000411767 FCGBPQ9Y6R7 5405 aaPredicted RBP1.08□□□□□ -2.24
PTPN13-202ENST00000411767 KRTAP4-9Q9BYQ8 210 aa1.05□□□□□ -2.24
PTPN13-202ENST00000411767 MDN1Q9NU22 5596 aa1.04□□□□□ -2.24
PTPN13-202ENST00000411767 KRTAP9-6A8MVA2 160 aa1.03□□□□□ -2.24
PTPN13-202ENST00000411767 OBSCNQ5VST9 7968 aa1.03□□□□□ -2.25
PTPN13-202ENST00000411767 KRTAP4-11Q9BYQ6 195 aa1.03□□□□□ -2.25
PTPN13-202ENST00000411767 KRTAP4-12Q9BQ66 201 aa1.01□□□□□ -2.25
PTPN13-202ENST00000411767 AHNAKQ09666 5890 aaKnown RBP1.01□□□□□ -2.25
PTPN13-202ENST00000411767 MACF1Q9UPN3 7388 aaKnown RBP1□□□□□ -2.25
PTPN13-202ENST00000411767 KRTAP6-3Q3LI67 103 aa1□□□□□ -2.25
PTPN13-202ENST00000411767 MUC5ACP98088 5654 aa1□□□□□ -2.25
PTPN13-202ENST00000411767 KRTAP6-1Q3LI64 71 aa0.99□□□□□ -2.25
PTPN13-202ENST00000411767 KRTAP4-3Q9BYR4 195 aa0.99□□□□□ -2.25
PTPN13-202ENST00000411767 SYNE2Q8WXH0 6885 aaKnown RBP0.98□□□□□ -2.25
PTPN13-202ENST00000411767 AHNAK2Q8IVF2 5795 aa0.98□□□□□ -2.25
PTPN13-202ENST00000411767 KRTAP9-1A8MXZ3 250 aaPredicted RBP0.96□□□□□ -2.26
PTPN13-202ENST00000411767 KRTAP5-2Q701N4 177 aa0.94□□□□□ -2.26
PTPN13-202ENST00000411767 NEBP20929 6669 aa0.94□□□□□ -2.26
PTPN13-202ENST00000411767 KRTAP5-9P26371 169 aa0.93□□□□□ -2.26
PTPN13-202ENST00000411767 FSIP2Q5CZC0 6907 aa0.93□□□□□ -2.26
PTPN13-202ENST00000411767 KRTAP5-5Q701N2 237 aaPredicted RBP0.88□□□□□ -2.27
PTPN13-202ENST00000411767 DSTQ03001 7570 aaKnown RBP0.86□□□□□ -2.27
PTPN13-202ENST00000411767 KRTAP4-4Q9BYR3 166 aa0.85□□□□□ -2.27
PTPN13-202ENST00000411767 KRTAP4-2Q9BYR5 136 aa0.84□□□□□ -2.28
PTPN13-202ENST00000411767 SYNE1Q8NF91 8797 aaKnown RBP0.83□□□□□ -2.28
PTPN13-202ENST00000411767 KRTAP5-4Q6L8H1 288 aa0.81□□□□□ -2.28
PTPN13-202ENST00000411767 MUC19Q7Z5P9 8384 aa0.75□□□□□ -2.29
PTPN13-202ENST00000411767 KRTAP5-6Q6L8G9 129 aaPredicted RBP0.74□□□□□ -2.29
PTPN13-202ENST00000411767 PHGR1C9JFL3 82 aa0.74□□□□□ -2.29
PTPN13-202ENST00000411767 KRTAP5-3Q6L8H2 238 aa0.72□□□□□ -2.29
PTPN13-202ENST00000411767 KRTAP21-1Q3LI58 79 aa0.66□□□□□ -2.3
PTPN13-202ENST00000411767 KRTAP5-10Q6L8G5 202 aa0.65□□□□□ -2.31
PTPN13-202ENST00000411767 KRTAP5-7Q6L8G8 165 aa0.64□□□□□ -2.31
PTPN13-202ENST00000411767 KRTAP5-1Q6L8H4 278 aa0.63□□□□□ -2.31
PTPN13-202ENST00000411767 KRTAP5-8O75690 187 aa0.62□□□□□ -2.31
PTPN13-202ENST00000411767 KRTAP21-2Q3LI59 83 aa0.57□□□□□ -2.32
PTPN13-202ENST00000411767 KRTAP5-11Q6L8G4 156 aa0.57□□□□□ -2.32
PTPN13-202ENST00000411767 MUC16Q8WXI7 14507 aa0.56□□□□□ -2.32
Retrieved 77 of 20,778 RNA–protein pairs in 109.3 ms