RNA–Protein interactions for RNA: ENST00000409855.5

SCN7A-201, Transcript of sodium voltage-gated channel alpha subunit 7, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN7A, Length 7,183 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN7A-201ENST00000409855 KRTAP12-3P60328 96 aa0.9□□□□□ -2.26
SCN7A-201ENST00000409855 MT1HP80294 61 aa0.89□□□□□ -2.27
SCN7A-201ENST00000409855 KRTAP4-9Q9BYQ8 210 aa0.89□□□□□ -2.27
SCN7A-201ENST00000409855 CRCT1Q9UGL9 99 aa0.88□□□□□ -2.27
SCN7A-201ENST00000409855 KRTAP19-1Q8IUB9 90 aa0.87□□□□□ -2.27
SCN7A-201ENST00000409855 KRTAP3-1Q9BYR8 98 aa0.87□□□□□ -2.27
SCN7A-201ENST00000409855 SPRR2EP22531 72 aa0.87□□□□□ -2.27
SCN7A-201ENST00000409855 SPRR2DP22532 72 aa0.87□□□□□ -2.27
SCN7A-201ENST00000409855 SPRR2BP35325 72 aa0.87□□□□□ -2.27
SCN7A-201ENST00000409855 SPRR2AP35326 72 aa0.87□□□□□ -2.27
SCN7A-201ENST00000409855 SPRR2GQ9BYE4 73 aa0.87□□□□□ -2.27
SCN7A-201ENST00000409855 MT2AP02795 61 aa0.86□□□□□ -2.27
SCN7A-201ENST00000409855 SPRR2FQ96RM1 72 aa0.86□□□□□ -2.27
SCN7A-201ENST00000409855 KRTAP5-1Q6L8H4 278 aa0.85□□□□□ -2.27
SCN7A-201ENST00000409855 KRTAP20-1Q3LI63 56 aa0.85□□□□□ -2.27
SCN7A-201ENST00000409855 KRTAP10-5P60370 271 aa0.84□□□□□ -2.28
SCN7A-201ENST00000409855 KRTAP19-8Q3LI54 63 aa0.84□□□□□ -2.28
SCN7A-201ENST00000409855 LCE3AQ5TA76 89 aa0.83□□□□□ -2.28
SCN7A-201ENST00000409855 KRTAP2-3P0C7H8 128 aa0.83□□□□□ -2.28
SCN7A-201ENST00000409855 KRTAP2-4Q9BYR9 128 aa0.83□□□□□ -2.28
SCN7A-201ENST00000409855 KRTAP5-10Q6L8G5 202 aa0.83□□□□□ -2.28
SCN7A-201ENST00000409855 LCE5AQ5TCM9 118 aa0.82□□□□□ -2.28
SCN7A-201ENST00000409855 LCE4AQ5TA78 99 aa0.82□□□□□ -2.28
SCN7A-201ENST00000409855 NEBP20929 6669 aa0.82□□□□□ -2.28
SCN7A-201ENST00000409855 MT1FP04733 61 aa0.81□□□□□ -2.28
SCN7A-201ENST00000409855 MT1GP13640 62 aa0.81□□□□□ -2.28
SCN7A-201ENST00000409855 LCE1AQ5T7P2 110 aa0.81□□□□□ -2.28
SCN7A-201ENST00000409855 KRTAP9-3Q9BYQ3 159 aa0.81□□□□□ -2.28
SCN7A-201ENST00000409855 MUC17Q685J3 4493 aa0.81□□□□□ -2.28
SCN7A-201ENST00000409855 KRTAP9-7A8MTY7 169 aa0.8□□□□□ -2.28
SCN7A-201ENST00000409855 LCE1DQ5T752 114 aa0.8□□□□□ -2.28
SCN7A-201ENST00000409855 SPRR5A0A1B0GTR4 108 aa0.8□□□□□ -2.28
SCN7A-201ENST00000409855 KRTAP6-3Q3LI67 103 aa0.8□□□□□ -2.28
SCN7A-201ENST00000409855 LCE3BQ5TA77 95 aa0.79□□□□□ -2.28
SCN7A-201ENST00000409855 KRTAP19-6Q3LI70 58 aa0.79□□□□□ -2.28
SCN7A-201ENST00000409855 KRTAP2-1Q9BYU5 128 aa0.78□□□□□ -2.28
SCN7A-201ENST00000409855 DSTQ03001 7570 aaKnown RBP0.78□□□□□ -2.28
SCN7A-201ENST00000409855 LCE3CQ5T5A8 94 aa0.78□□□□□ -2.28
SCN7A-201ENST00000409855 KRTAP4-11Q9BYQ6 195 aa0.77□□□□□ -2.29
SCN7A-201ENST00000409855 MT3P25713 68 aa0.77□□□□□ -2.29
SCN7A-201ENST00000409855 KRTAP19-5Q3LI72 72 aa0.77□□□□□ -2.29
SCN7A-201ENST00000409855 KRTAP4-1Q9BYQ7 146 aa0.76□□□□□ -2.29
SCN7A-201ENST00000409855 SYNE1Q8NF91 8797 aaKnown RBP0.76□□□□□ -2.29
SCN7A-201ENST00000409855 MACF1Q9UPN3 7388 aaKnown RBP0.76□□□□□ -2.29
SCN7A-201ENST00000409855 SYNE2Q8WXH0 6885 aaKnown RBP0.76□□□□□ -2.29
SCN7A-201ENST00000409855 KRTAP19-2Q3LHN2 52 aa0.76□□□□□ -2.29
SCN7A-201ENST00000409855 KRTAP4-4Q9BYR3 166 aa0.75□□□□□ -2.29
SCN7A-201ENST00000409855 KRTAP5-7Q6L8G8 165 aa0.75□□□□□ -2.29
SCN7A-201ENST00000409855 LPAP08519 4548 aa0.75□□□□□ -2.29
SCN7A-201ENST00000409855 KRTAP19-3Q7Z4W3 81 aa0.75□□□□□ -2.29
SCN7A-201ENST00000409855 MT1EP04732 61 aa0.73□□□□□ -2.29
SCN7A-201ENST00000409855 MT1BP07438 61 aa0.72□□□□□ -2.29
SCN7A-201ENST00000409855 MT1LQ93083 61 aa0.72□□□□□ -2.29
SCN7A-201ENST00000409855 MT1XP80297 61 aa0.71□□□□□ -2.3
SCN7A-201ENST00000409855 MT1MQ8N339 61 aa0.71□□□□□ -2.3
SCN7A-201ENST00000409855 LCE3EQ5T5B0 92 aa0.7□□□□□ -2.3
SCN7A-201ENST00000409855 LCE3DQ9BYE3 92 aa0.69□□□□□ -2.3
SCN7A-201ENST00000409855 MT1AP04731 61 aa0.68□□□□□ -2.3
SCN7A-201ENST00000409855 MUC19Q7Z5P9 8384 aa0.68□□□□□ -2.3
SCN7A-201ENST00000409855 MT4P47944 62 aa0.66□□□□□ -2.3
SCN7A-201ENST00000409855 KRTAP5-11Q6L8G4 156 aa0.66□□□□□ -2.3
SCN7A-201ENST00000409855 FSIP2Q5CZC0 6907 aa0.65□□□□□ -2.3
SCN7A-201ENST00000409855 LCE1CQ5T751 118 aa0.61□□□□□ -2.31
SCN7A-201ENST00000409855 LCE1EQ5T753 118 aa0.61□□□□□ -2.31
SCN7A-201ENST00000409855 LCE1FQ5T754 118 aa0.61□□□□□ -2.31
SCN7A-201ENST00000409855 LCE1BQ5T7P3 118 aa0.61□□□□□ -2.31
SCN7A-201ENST00000409855 KRTAP19-7Q3SYF9 63 aa0.57□□□□□ -2.32
SCN7A-201ENST00000409855 KRTAP6-2Q3LI66 62 aa0.54□□□□□ -2.32
SCN7A-201ENST00000409855 PRM1P04553 51 aa0.53□□□□□ -2.33
SCN7A-201ENST00000409855 KRTAP20-2Q3LI61 65 aa0.52□□□□□ -2.33
SCN7A-201ENST00000409855 KRTAP6-1Q3LI64 71 aa0.51□□□□□ -2.33
SCN7A-201ENST00000409855 KRTAP4-3Q9BYR4 195 aa0.51□□□□□ -2.33
SCN7A-201ENST00000409855 KRTAP9-6A8MVA2 160 aa0.47□□□□□ -2.33
SCN7A-201ENST00000409855 PHGR1C9JFL3 82 aa0.44□□□□□ -2.34
SCN7A-201ENST00000409855 KRTAP21-1Q3LI58 79 aa0.43□□□□□ -2.34
SCN7A-201ENST00000409855 KRTAP21-2Q3LI59 83 aa0.38□□□□□ -2.35
SCN7A-201ENST00000409855 MUC16Q8WXI7 14507 aa0.34□□□□□ -2.35
Retrieved 77 of 20,778 RNA–protein pairs in 11.5 ms