RNA–Protein interactions for RNA: ENST00000409532.5

ITGA6-203, Transcript of integrin subunit alpha 6, humanhuman

TSL 2 BASIC

Gene ITGA6, Length 3,544 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA6-203ENST00000409532 LOC100996750A0A140TA64 210 aa3.78□□□□□ -1.8
ITGA6-203ENST00000409532 KRTAP2-3P0C7H8 128 aa3.77□□□□□ -1.81
ITGA6-203ENST00000409532 KRTAP2-4Q9BYR9 128 aa3.77□□□□□ -1.81
ITGA6-203ENST00000409532 KRTAP2-1Q9BYU5 128 aa3.77□□□□□ -1.81
ITGA6-203ENST00000409532 CRCT1Q9UGL9 99 aa3.76□□□□□ -1.81
ITGA6-203ENST00000409532 DSTQ03001 7570 aaKnown RBP3.75□□□□□ -1.81
ITGA6-203ENST00000409532 KRTAP9-2Q9BYQ4 174 aa3.75□□□□□ -1.81
ITGA6-203ENST00000409532 MACF1Q9UPN3 7388 aaKnown RBP3.73□□□□□ -1.81
ITGA6-203ENST00000409532 KRTAP19-6Q3LI70 58 aa3.73□□□□□ -1.81
ITGA6-203ENST00000409532 MT1GP13640 62 aa3.72□□□□□ -1.81
ITGA6-203ENST00000409532 KRTAP19-4Q3LI73 84 aa3.64□□□□□ -1.83
ITGA6-203ENST00000409532 MT1MQ8N339 61 aa3.62□□□□□ -1.83
ITGA6-203ENST00000409532 KRTAP19-3Q7Z4W3 81 aa3.61□□□□□ -1.83
ITGA6-203ENST00000409532 MDN1Q9NU22 5596 aa3.57□□□□□ -1.84
ITGA6-203ENST00000409532 SPRR2FQ96RM1 72 aa3.57□□□□□ -1.84
ITGA6-203ENST00000409532 SYNE1Q8NF91 8797 aaKnown RBP3.55□□□□□ -1.84
ITGA6-203ENST00000409532 LCE3BQ5TA77 95 aa3.47□□□□□ -1.85
ITGA6-203ENST00000409532 KRTAP12-4P60329 112 aa3.46□□□□□ -1.86
ITGA6-203ENST00000409532 LCE5AQ5TCM9 118 aa3.45□□□□□ -1.86
ITGA6-203ENST00000409532 KRTAP4-9Q9BYQ8 210 aa3.44□□□□□ -1.86
ITGA6-203ENST00000409532 KRTAP9-6A0A140TA67 174 aa3.42□□□□□ -1.86
ITGA6-203ENST00000409532 OBSCNQ5VST9 7968 aa3.36□□□□□ -1.87
ITGA6-203ENST00000409532 KRTAP6-1Q3LI64 71 aa3.33□□□□□ -1.88
ITGA6-203ENST00000409532 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.29□□□□□ -1.88
ITGA6-203ENST00000409532 LCE4AQ5TA78 99 aa3.28□□□□□ -1.88
ITGA6-203ENST00000409532 LCE1AQ5T7P2 110 aa3.24□□□□□ -1.89
ITGA6-203ENST00000409532 MT1AP04731 61 aa3.21□□□□□ -1.9
ITGA6-203ENST00000409532 SPRR2EP22531 72 aa3.2□□□□□ -1.9
ITGA6-203ENST00000409532 SPRR2BP35325 72 aa3.2□□□□□ -1.9
ITGA6-203ENST00000409532 SPRR2AP35326 72 aa3.2□□□□□ -1.9
ITGA6-203ENST00000409532 LCE3DQ9BYE3 92 aa3.2□□□□□ -1.9
ITGA6-203ENST00000409532 KRTAP9-7A8MTY7 169 aa3.17□□□□□ -1.9
ITGA6-203ENST00000409532 LCE3EQ5T5B0 92 aa3.14□□□□□ -1.91
ITGA6-203ENST00000409532 KRTAP5-9P26371 169 aa3.12□□□□□ -1.91
ITGA6-203ENST00000409532 KRTAP5-5Q701N2 237 aaPredicted RBP3.12□□□□□ -1.91
ITGA6-203ENST00000409532 KRTAP9-9Q9BYP9 154 aa3.11□□□□□ -1.91
ITGA6-203ENST00000409532 KRTAP9-4Q9BYQ2 154 aa3.11□□□□□ -1.91
ITGA6-203ENST00000409532 PRM1P04553 51 aa3.07□□□□□ -1.92
ITGA6-203ENST00000409532 NEBP20929 6669 aa3.07□□□□□ -1.92
ITGA6-203ENST00000409532 SPRR2DP22532 72 aa3.05□□□□□ -1.92
ITGA6-203ENST00000409532 KRTAP4-6Q9BYQ5 205 aa3.04□□□□□ -1.92
ITGA6-203ENST00000409532 KRTAP4-12Q9BQ66 201 aa3.01□□□□□ -1.93
ITGA6-203ENST00000409532 KRTAP6-3Q3LI67 103 aa3.01□□□□□ -1.93
ITGA6-203ENST00000409532 KRTAP6-2Q3LI66 62 aa3□□□□□ -1.93
ITGA6-203ENST00000409532 MT3P25713 68 aa2.9□□□□□ -1.94
ITGA6-203ENST00000409532 MT4P47944 62 aa2.8□□□□□ -1.96
ITGA6-203ENST00000409532 HMCN1Q96RW7 5635 aa2.73□□□□□ -1.97
ITGA6-203ENST00000409532 KRTAP20-1Q3LI63 56 aa2.72□□□□□ -1.97
ITGA6-203ENST00000409532 KRTAP5-4Q6L8H1 288 aa2.7□□□□□ -1.98
ITGA6-203ENST00000409532 LCE1DQ5T752 114 aa2.65□□□□□ -1.98
ITGA6-203ENST00000409532 KRTAP2-2Q9BYT5 123 aa2.64□□□□□ -1.99
ITGA6-203ENST00000409532 KRTAP20-2Q3LI61 65 aa2.62□□□□□ -1.99
ITGA6-203ENST00000409532 KRTAP4-11Q9BYQ6 195 aa2.53□□□□□ -2
ITGA6-203ENST00000409532 KRTAP5-2Q701N4 177 aa2.52□□□□□ -2.01
ITGA6-203ENST00000409532 MUC5ACP98088 5654 aa2.5□□□□□ -2.01
ITGA6-203ENST00000409532 LCE1FQ5T754 118 aa2.48□□□□□ -2.01
ITGA6-203ENST00000409532 LCE1BQ5T7P3 118 aa2.48□□□□□ -2.01
ITGA6-203ENST00000409532 KRTAP5-3Q6L8H2 238 aa2.44□□□□□ -2.02
ITGA6-203ENST00000409532 KRTAP4-2Q9BYR5 136 aa2.44□□□□□ -2.02
ITGA6-203ENST00000409532 AHNAK2Q8IVF2 5795 aa2.34□□□□□ -2.04
ITGA6-203ENST00000409532 KRTAP5-10Q6L8G5 202 aa2.3□□□□□ -2.04
ITGA6-203ENST00000409532 GPR98Q8WXG9 6306 aa2.29□□□□□ -2.04
ITGA6-203ENST00000409532 LCE1EQ5T753 118 aa2.28□□□□□ -2.05
ITGA6-203ENST00000409532 MUC5BQ9HC84 5762 aaPredicted RBP2.22□□□□□ -2.05
ITGA6-203ENST00000409532 KRTAP5-1Q6L8H4 278 aa2.21□□□□□ -2.06
ITGA6-203ENST00000409532 LCE1CQ5T751 118 aa2.18□□□□□ -2.06
ITGA6-203ENST00000409532 MUC19Q7Z5P9 8384 aa2.14□□□□□ -2.07
ITGA6-203ENST00000409532 KRTAP21-2Q3LI59 83 aa2.1□□□□□ -2.07
ITGA6-203ENST00000409532 KRTAP4-4Q9BYR3 166 aa2.09□□□□□ -2.07
ITGA6-203ENST00000409532 KRTAP5-8O75690 187 aa2.07□□□□□ -2.08
ITGA6-203ENST00000409532 KRTAP5-6Q6L8G9 129 aaPredicted RBP2□□□□□ -2.09
ITGA6-203ENST00000409532 KRTAP5-7Q6L8G8 165 aa1.9□□□□□ -2.1
ITGA6-203ENST00000409532 KRTAP5-11Q6L8G4 156 aa1.86□□□□□ -2.11
ITGA6-203ENST00000409532 KRTAP21-1Q3LI58 79 aa1.83□□□□□ -2.12
ITGA6-203ENST00000409532 AHNAKQ09666 5890 aaKnown RBP1.8□□□□□ -2.12
ITGA6-203ENST00000409532 PHGR1C9JFL3 82 aa1.63□□□□□ -2.15
ITGA6-203ENST00000409532 MUC16Q8WXI7 14507 aa1.08□□□□□ -2.24
Retrieved 77 of 20,778 RNA–protein pairs in 86.1 ms