RNA–Protein interactions for RNA: ENST00000409214.5

GTDC1-206, Transcript of glycosyltransferase like domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTDC1, Length 2,954 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTDC1-206ENST00000409214 HERC2O95714 4834 aa1.73□□□□□ -2.13
GTDC1-206ENST00000409214 FAT4Q6V0I7 4981 aa1.72□□□□□ -2.13
GTDC1-206ENST00000409214 HERC1Q15751 4861 aa1.71□□□□□ -2.14
GTDC1-206ENST00000409214 M0R2T5 61 aa1.7□□□□□ -2.14
GTDC1-206ENST00000409214 KRTAP12-4P60329 112 aa1.69□□□□□ -2.14
GTDC1-206ENST00000409214 RNF213Q63HN8 5207 aa1.69□□□□□ -2.14
GTDC1-206ENST00000409214 MUC17Q685J3 4493 aa1.69□□□□□ -2.14
GTDC1-206ENST00000409214 KRTAP5-2Q701N4 177 aa1.68□□□□□ -2.14
GTDC1-206ENST00000409214 KRTAP10-5P60370 271 aa1.67□□□□□ -2.14
GTDC1-206ENST00000409214 KRTAP5-8O75690 187 aa1.67□□□□□ -2.14
GTDC1-206ENST00000409214 TNP1P09430 55 aa1.65□□□□□ -2.15
GTDC1-206ENST00000409214 CRCT1Q9UGL9 99 aa1.64□□□□□ -2.15
GTDC1-206ENST00000409214 KRTAP19-2Q3LHN2 52 aa1.63□□□□□ -2.15
GTDC1-206ENST00000409214 UBR4Q5T4S7 5183 aa1.63□□□□□ -2.15
GTDC1-206ENST00000409214 HMCN2Q8NDA2 5059 aa1.62□□□□□ -2.15
GTDC1-206ENST00000409214 FLGP20930 4061 aaPredicted RBP1.61□□□□□ -2.15
GTDC1-206ENST00000409214 KRTAP12-3P60328 96 aa1.59□□□□□ -2.16
GTDC1-206ENST00000409214 KRTAP9-6A8MVA2 160 aa1.58□□□□□ -2.16
GTDC1-206ENST00000409214 LCE3AQ5TA76 89 aa1.58□□□□□ -2.16
GTDC1-206ENST00000409214 OBSCNQ5VST9 7968 aa1.56□□□□□ -2.16
GTDC1-206ENST00000409214 MT1FP04733 61 aa1.55□□□□□ -2.16
GTDC1-206ENST00000409214 KRTAP4-3Q9BYR4 195 aa1.55□□□□□ -2.16
GTDC1-206ENST00000409214 MT1HP80294 61 aa1.54□□□□□ -2.16
GTDC1-206ENST00000409214 USH2AO75445 5202 aa1.54□□□□□ -2.16
GTDC1-206ENST00000409214 KRTAP20-1Q3LI63 56 aa1.53□□□□□ -2.16
GTDC1-206ENST00000409214 MUC19Q7Z5P9 8384 aa1.53□□□□□ -2.16
GTDC1-206ENST00000409214 MT2AP02795 61 aa1.53□□□□□ -2.16
GTDC1-206ENST00000409214 KMT2DO14686 5537 aa1.52□□□□□ -2.17
GTDC1-206ENST00000409214 SPRR2GQ9BYE4 73 aa1.52□□□□□ -2.17
GTDC1-206ENST00000409214 AHNAKQ09666 5890 aaKnown RBP1.51□□□□□ -2.17
GTDC1-206ENST00000409214 SSPOA2VEC9 5147 aa1.48□□□□□ -2.17
GTDC1-206ENST00000409214 MT1XP80297 61 aa1.47□□□□□ -2.17
GTDC1-206ENST00000409214 MT1BP07438 61 aa1.47□□□□□ -2.17
GTDC1-206ENST00000409214 FSIP2Q5CZC0 6907 aa1.47□□□□□ -2.17
GTDC1-206ENST00000409214 KRTAP8-1Q8IUC2 63 aa1.44□□□□□ -2.18
GTDC1-206ENST00000409214 KRTAP19-5Q3LI72 72 aa1.43□□□□□ -2.18
GTDC1-206ENST00000409214 KRTAP19-8Q3LI54 63 aa1.42□□□□□ -2.18
GTDC1-206ENST00000409214 NEBP20929 6669 aa1.42□□□□□ -2.18
GTDC1-206ENST00000409214 KRTAP5-7Q6L8G8 165 aa1.38□□□□□ -2.19
GTDC1-206ENST00000409214 DSTQ03001 7570 aaKnown RBP1.37□□□□□ -2.19
GTDC1-206ENST00000409214 KRTAP2-3P0C7H8 128 aa1.37□□□□□ -2.19
GTDC1-206ENST00000409214 KRTAP2-4Q9BYR9 128 aa1.37□□□□□ -2.19
GTDC1-206ENST00000409214 FCGBPQ9Y6R7 5405 aaPredicted RBP1.33□□□□□ -2.2
GTDC1-206ENST00000409214 MUC12Q9UKN1 5478 aa1.32□□□□□ -2.2
GTDC1-206ENST00000409214 SYNE1Q8NF91 8797 aaKnown RBP1.32□□□□□ -2.2
GTDC1-206ENST00000409214 KRTAP5-5Q701N2 237 aaPredicted RBP1.31□□□□□ -2.2
GTDC1-206ENST00000409214 KRTAP19-7Q3SYF9 63 aa1.3□□□□□ -2.2
GTDC1-206ENST00000409214 MT1GP13640 62 aa1.28□□□□□ -2.2
GTDC1-206ENST00000409214 LCE1CQ5T751 118 aa1.28□□□□□ -2.2
GTDC1-206ENST00000409214 LCE1BQ5T7P3 118 aa1.28□□□□□ -2.2
GTDC1-206ENST00000409214 MT1LQ93083 61 aa1.27□□□□□ -2.21
GTDC1-206ENST00000409214 MT1EP04732 61 aa1.26□□□□□ -2.21
GTDC1-206ENST00000409214 KRTAP2-1Q9BYU5 128 aa1.26□□□□□ -2.21
GTDC1-206ENST00000409214 AHNAK2Q8IVF2 5795 aa1.23□□□□□ -2.21
GTDC1-206ENST00000409214 SYNE2Q8WXH0 6885 aaKnown RBP1.21□□□□□ -2.22
GTDC1-206ENST00000409214 KRTAP5-10Q6L8G5 202 aa1.21□□□□□ -2.22
GTDC1-206ENST00000409214 SPRR2FQ96RM1 72 aa1.2□□□□□ -2.22
GTDC1-206ENST00000409214 MT1MQ8N339 61 aa1.19□□□□□ -2.22
GTDC1-206ENST00000409214 MACF1Q9UPN3 7388 aaKnown RBP1.18□□□□□ -2.22
GTDC1-206ENST00000409214 MDN1Q9NU22 5596 aa1.18□□□□□ -2.22
GTDC1-206ENST00000409214 KRTAP19-3Q7Z4W3 81 aa1.17□□□□□ -2.22
GTDC1-206ENST00000409214 KRTAP19-6Q3LI70 58 aa1.17□□□□□ -2.22
GTDC1-206ENST00000409214 KRTAP6-1Q3LI64 71 aa1.12□□□□□ -2.23
GTDC1-206ENST00000409214 PRM1P04553 51 aa1.09□□□□□ -2.24
GTDC1-206ENST00000409214 SPRR2EP22531 72 aa1.07□□□□□ -2.24
GTDC1-206ENST00000409214 SPRR2BP35325 72 aa1.07□□□□□ -2.24
GTDC1-206ENST00000409214 SPRR2AP35326 72 aa1.07□□□□□ -2.24
GTDC1-206ENST00000409214 MUC5ACP98088 5654 aa1.06□□□□□ -2.24
GTDC1-206ENST00000409214 MT1AP04731 61 aa1.04□□□□□ -2.24
GTDC1-206ENST00000409214 KRTAP6-2Q3LI66 62 aa1.02□□□□□ -2.25
GTDC1-206ENST00000409214 SPRR2DP22532 72 aa1.01□□□□□ -2.25
GTDC1-206ENST00000409214 MT4P47944 62 aa0.97□□□□□ -2.25
GTDC1-206ENST00000409214 KRTAP21-2Q3LI59 83 aa0.87□□□□□ -2.27
GTDC1-206ENST00000409214 KRTAP20-2Q3LI61 65 aa0.84□□□□□ -2.28
GTDC1-206ENST00000409214 KRTAP21-1Q3LI58 79 aa0.8□□□□□ -2.28
GTDC1-206ENST00000409214 PHGR1C9JFL3 82 aa0.69□□□□□ -2.3
GTDC1-206ENST00000409214 MUC16Q8WXI7 14507 aa0.53□□□□□ -2.32
Retrieved 77 of 20,778 RNA–protein pairs in 125.7 ms