RNA–Protein interactions for RNA: ENST00000409031.5

SMPD4-202, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPD4, Length 4,896 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-202ENST00000409031 LCE2AQ5TA79 106 aaPredicted RBP5.46□□□□□ -1.54
SMPD4-202ENST00000409031 HMCN2Q8NDA2 5059 aa5.45□□□□□ -1.54
SMPD4-202ENST00000409031 SPRR2EP22531 72 aa5.42□□□□□ -1.54
SMPD4-202ENST00000409031 SPRR2BP35325 72 aa5.42□□□□□ -1.54
SMPD4-202ENST00000409031 SPRR2AP35326 72 aa5.42□□□□□ -1.54
SMPD4-202ENST00000409031 FSIP2Q5CZC0 6907 aa5.38□□□□□ -1.55
SMPD4-202ENST00000409031 MT1MQ8N339 61 aa5.38□□□□□ -1.55
SMPD4-202ENST00000409031 KRTAP19-7Q3SYF9 63 aa5.37□□□□□ -1.55
SMPD4-202ENST00000409031 KRTAP9-2Q9BYQ4 174 aa5.35□□□□□ -1.55
SMPD4-202ENST00000409031 LOC100996750A0A140TA64 210 aa5.34□□□□□ -1.56
SMPD4-202ENST00000409031 KRTAP9-6A8MVA2 160 aa5.28□□□□□ -1.56
SMPD4-202ENST00000409031 KRTAP19-6Q3LI70 58 aa5.26□□□□□ -1.57
SMPD4-202ENST00000409031 LCE2DQ5TA82 110 aaPredicted RBP5.24□□□□□ -1.57
SMPD4-202ENST00000409031 SPRR2DP22532 72 aa5.23□□□□□ -1.57
SMPD4-202ENST00000409031 KRTAP4-3Q9BYR4 195 aa5.23□□□□□ -1.57
SMPD4-202ENST00000409031 MUC2Q02817 5179 aa5.22□□□□□ -1.57
SMPD4-202ENST00000409031 MT3P25713 68 aa5.17□□□□□ -1.58
SMPD4-202ENST00000409031 MT1AP04731 61 aa5.07□□□□□ -1.6
SMPD4-202ENST00000409031 KRTAP4-9Q9BYQ8 210 aa5.07□□□□□ -1.6
SMPD4-202ENST00000409031 KRTAP9-6A0A140TA67 174 aa5.04□□□□□ -1.6
SMPD4-202ENST00000409031 OBSCNQ5VST9 7968 aa4.89□□□□□ -1.63
SMPD4-202ENST00000409031 KRTAP6-2Q3LI66 62 aa4.84□□□□□ -1.64
SMPD4-202ENST00000409031 KRTAP9-7A8MTY7 169 aa4.79□□□□□ -1.64
SMPD4-202ENST00000409031 KRTAP6-1Q3LI64 71 aa4.79□□□□□ -1.64
SMPD4-202ENST00000409031 USH2AO75445 5202 aa4.69□□□□□ -1.66
SMPD4-202ENST00000409031 KRTAP6-3Q3LI67 103 aa4.68□□□□□ -1.66
SMPD4-202ENST00000409031 LCE5AQ5TCM9 118 aa4.68□□□□□ -1.66
SMPD4-202ENST00000409031 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.67□□□□□ -1.66
SMPD4-202ENST00000409031 FCGBPQ9Y6R7 5405 aaPredicted RBP4.64□□□□□ -1.67
SMPD4-202ENST00000409031 LCE1DQ5T752 114 aa4.63□□□□□ -1.67
SMPD4-202ENST00000409031 LCE1BQ5T7P3 118 aa4.63□□□□□ -1.67
SMPD4-202ENST00000409031 MT4P47944 62 aa4.62□□□□□ -1.67
SMPD4-202ENST00000409031 SYNE2Q8WXH0 6885 aaKnown RBP4.62□□□□□ -1.67
SMPD4-202ENST00000409031 KRTAP9-4Q9BYQ2 154 aa4.62□□□□□ -1.67
SMPD4-202ENST00000409031 LCE1AQ5T7P2 110 aa4.6□□□□□ -1.67
SMPD4-202ENST00000409031 KRTAP2-2Q9BYT5 123 aa4.52□□□□□ -1.69
SMPD4-202ENST00000409031 KRTAP20-1Q3LI63 56 aa4.5□□□□□ -1.69
SMPD4-202ENST00000409031 DSTQ03001 7570 aaKnown RBP4.4□□□□□ -1.7
SMPD4-202ENST00000409031 SSPOA2VEC9 5147 aa4.36□□□□□ -1.71
SMPD4-202ENST00000409031 MACF1Q9UPN3 7388 aaKnown RBP4.36□□□□□ -1.71
SMPD4-202ENST00000409031 KMT2DO14686 5537 aa4.35□□□□□ -1.71
SMPD4-202ENST00000409031 LCE4AQ5TA78 99 aa4.23□□□□□ -1.73
SMPD4-202ENST00000409031 KRTAP5-9P26371 169 aa4.22□□□□□ -1.73
SMPD4-202ENST00000409031 MUC12Q9UKN1 5478 aa4.19□□□□□ -1.74
SMPD4-202ENST00000409031 KRTAP5-5Q701N2 237 aaPredicted RBP4.09□□□□□ -1.75
SMPD4-202ENST00000409031 NEBP20929 6669 aa4.03□□□□□ -1.76
SMPD4-202ENST00000409031 KRTAP4-11Q9BYQ6 195 aa3.99□□□□□ -1.77
SMPD4-202ENST00000409031 MDN1Q9NU22 5596 aa3.98□□□□□ -1.77
SMPD4-202ENST00000409031 MUC19Q7Z5P9 8384 aa3.94□□□□□ -1.78
SMPD4-202ENST00000409031 LCE1EQ5T753 118 aa3.84□□□□□ -1.79
SMPD4-202ENST00000409031 KRTAP4-6Q9BYQ5 205 aa3.77□□□□□ -1.81
SMPD4-202ENST00000409031 KRTAP20-2Q3LI61 65 aa3.7□□□□□ -1.82
SMPD4-202ENST00000409031 LCE1CQ5T751 118 aa3.67□□□□□ -1.82
SMPD4-202ENST00000409031 LCE1FQ5T754 118 aa3.67□□□□□ -1.82
SMPD4-202ENST00000409031 GPR98Q8WXG9 6306 aa3.63□□□□□ -1.83
SMPD4-202ENST00000409031 KRTAP9-9Q9BYP9 154 aa3.52□□□□□ -1.85
SMPD4-202ENST00000409031 KRTAP5-4Q6L8H1 288 aa3.49□□□□□ -1.85
SMPD4-202ENST00000409031 KRTAP4-4Q9BYR3 166 aa3.32□□□□□ -1.88
SMPD4-202ENST00000409031 KRTAP5-3Q6L8H2 238 aa3.18□□□□□ -1.9
SMPD4-202ENST00000409031 MUC5ACP98088 5654 aa3.18□□□□□ -1.9
SMPD4-202ENST00000409031 KRTAP5-10Q6L8G5 202 aa3.13□□□□□ -1.91
SMPD4-202ENST00000409031 HMCN1Q96RW7 5635 aa3.11□□□□□ -1.91
SMPD4-202ENST00000409031 KRTAP4-12Q9BQ66 201 aa3.07□□□□□ -1.92
SMPD4-202ENST00000409031 KRTAP4-2Q9BYR5 136 aa3.07□□□□□ -1.92
SMPD4-202ENST00000409031 AHNAK2Q8IVF2 5795 aa3□□□□□ -1.93
SMPD4-202ENST00000409031 KRTAP5-2Q701N4 177 aa2.95□□□□□ -1.94
SMPD4-202ENST00000409031 KRTAP5-8O75690 187 aa2.88□□□□□ -1.95
SMPD4-202ENST00000409031 KRTAP21-1Q3LI58 79 aa2.68□□□□□ -1.98
SMPD4-202ENST00000409031 KRTAP5-1Q6L8H4 278 aa2.6□□□□□ -1.99
SMPD4-202ENST00000409031 KRTAP21-2Q3LI59 83 aa2.58□□□□□ -2
SMPD4-202ENST00000409031 AHNAKQ09666 5890 aaKnown RBP2.54□□□□□ -2
SMPD4-202ENST00000409031 KRTAP5-11Q6L8G4 156 aa2.53□□□□□ -2
SMPD4-202ENST00000409031 MUC5BQ9HC84 5762 aaPredicted RBP2.51□□□□□ -2.01
SMPD4-202ENST00000409031 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.43□□□□□ -2.02
SMPD4-202ENST00000409031 KRTAP5-7Q6L8G8 165 aa2.37□□□□□ -2.03
SMPD4-202ENST00000409031 PHGR1C9JFL3 82 aa2.3□□□□□ -2.04
SMPD4-202ENST00000409031 MUC16Q8WXI7 14507 aa1.48□□□□□ -2.17
Retrieved 77 of 20,778 RNA–protein pairs in 45.6 ms