RNA–Protein interactions for RNA: ENST00000408999.3

RGPD4-201, Transcript of RANBP2-like and GRIP domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RGPD4, Length 5,464 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD4-201ENST00000408999 KRTAP19-1Q8IUB9 90 aa1.43□□□□□ -2.18
RGPD4-201ENST00000408999 MACF1Q9UPN3 7388 aaKnown RBP1.43□□□□□ -2.18
RGPD4-201ENST00000408999 KRTAP10-7P60409 375 aaPredicted RBP1.43□□□□□ -2.18
RGPD4-201ENST00000408999 LCE3CQ5T5A8 94 aa1.42□□□□□ -2.18
RGPD4-201ENST00000408999 GPR98Q8WXG9 6306 aa1.41□□□□□ -2.18
RGPD4-201ENST00000408999 MT1XP80297 61 aa1.4□□□□□ -2.18
RGPD4-201ENST00000408999 SYNE2Q8WXH0 6885 aaKnown RBP1.4□□□□□ -2.19
RGPD4-201ENST00000408999 KRTAP9-1A8MXZ3 250 aaPredicted RBP1.4□□□□□ -2.19
RGPD4-201ENST00000408999 MT1BP07438 61 aa1.39□□□□□ -2.19
RGPD4-201ENST00000408999 KRTAP6-3Q3LI67 103 aa1.39□□□□□ -2.19
RGPD4-201ENST00000408999 KRTAP9-3Q9BYQ3 159 aa1.39□□□□□ -2.19
RGPD4-201ENST00000408999 KRTAP9-9Q9BYP9 154 aa1.38□□□□□ -2.19
RGPD4-201ENST00000408999 KRTAP9-4Q9BYQ2 154 aa1.38□□□□□ -2.19
RGPD4-201ENST00000408999 SPRR2EP22531 72 aa1.38□□□□□ -2.19
RGPD4-201ENST00000408999 SPRR2BP35325 72 aa1.38□□□□□ -2.19
RGPD4-201ENST00000408999 SPRR2AP35326 72 aa1.38□□□□□ -2.19
RGPD4-201ENST00000408999 KRTAP5-3Q6L8H2 238 aa1.36□□□□□ -2.19
RGPD4-201ENST00000408999 MUC5BQ9HC84 5762 aaPredicted RBP1.35□□□□□ -2.19
RGPD4-201ENST00000408999 LCE1EQ5T753 118 aa1.34□□□□□ -2.19
RGPD4-201ENST00000408999 SPRR2DP22532 72 aa1.34□□□□□ -2.2
RGPD4-201ENST00000408999 KRTAP5-5Q701N2 237 aaPredicted RBP1.34□□□□□ -2.2
RGPD4-201ENST00000408999 KRTAP4-8A0A0G2JLE6 195 aa1.33□□□□□ -2.2
RGPD4-201ENST00000408999 KRTAP4-8Q9BYQ9 185 aa1.33□□□□□ -2.2
RGPD4-201ENST00000408999 KRTAP2-2Q9BYT5 123 aa1.33□□□□□ -2.2
RGPD4-201ENST00000408999 MT1GP13640 62 aa1.33□□□□□ -2.2
RGPD4-201ENST00000408999 LCE1AQ5T7P2 110 aa1.31□□□□□ -2.2
RGPD4-201ENST00000408999 LCE3BQ5TA77 95 aa1.3□□□□□ -2.2
RGPD4-201ENST00000408999 KRTAP2-3P0C7H8 128 aa1.3□□□□□ -2.2
RGPD4-201ENST00000408999 KRTAP2-4Q9BYR9 128 aa1.3□□□□□ -2.2
RGPD4-201ENST00000408999 KRTAP2-1Q9BYU5 128 aa1.3□□□□□ -2.2
RGPD4-201ENST00000408999 KRTAP5-7Q6L8G8 165 aa1.28□□□□□ -2.2
RGPD4-201ENST00000408999 KRTAP4-9Q9BYQ8 210 aa1.28□□□□□ -2.2
RGPD4-201ENST00000408999 KRTAP4-3Q9BYR4 195 aa1.28□□□□□ -2.2
RGPD4-201ENST00000408999 NEBP20929 6669 aa1.27□□□□□ -2.21
RGPD4-201ENST00000408999 KRTAP19-7Q3SYF9 63 aa1.26□□□□□ -2.21
RGPD4-201ENST00000408999 KRTAP19-3Q7Z4W3 81 aa1.26□□□□□ -2.21
RGPD4-201ENST00000408999 MT1EP04732 61 aa1.26□□□□□ -2.21
RGPD4-201ENST00000408999 MT1LQ93083 61 aa1.26□□□□□ -2.21
RGPD4-201ENST00000408999 KRTAP19-6Q3LI70 58 aa1.25□□□□□ -2.21
RGPD4-201ENST00000408999 KRTAP4-12Q9BQ66 201 aa1.24□□□□□ -2.21
RGPD4-201ENST00000408999 KRTAP12-4P60329 112 aa1.24□□□□□ -2.21
RGPD4-201ENST00000408999 LCE1DQ5T752 114 aa1.24□□□□□ -2.21
RGPD4-201ENST00000408999 AHNAK2Q8IVF2 5795 aa1.22□□□□□ -2.21
RGPD4-201ENST00000408999 AHNAKQ09666 5890 aaKnown RBP1.22□□□□□ -2.21
RGPD4-201ENST00000408999 KRTAP4-2Q9BYR5 136 aa1.22□□□□□ -2.21
RGPD4-201ENST00000408999 MT1MQ8N339 61 aa1.21□□□□□ -2.22
RGPD4-201ENST00000408999 KRTAP20-1Q3LI63 56 aa1.21□□□□□ -2.22
RGPD4-201ENST00000408999 MUC5ACP98088 5654 aa1.2□□□□□ -2.22
RGPD4-201ENST00000408999 KRTAP5-10Q6L8G5 202 aa1.2□□□□□ -2.22
RGPD4-201ENST00000408999 LCE4AQ5TA78 99 aa1.19□□□□□ -2.22
RGPD4-201ENST00000408999 LCE3DQ9BYE3 92 aa1.19□□□□□ -2.22
RGPD4-201ENST00000408999 MT4P47944 62 aa1.18□□□□□ -2.22
RGPD4-201ENST00000408999 LCE3EQ5T5B0 92 aa1.16□□□□□ -2.22
RGPD4-201ENST00000408999 HMCN1Q96RW7 5635 aa1.15□□□□□ -2.23
RGPD4-201ENST00000408999 MT3P25713 68 aa1.13□□□□□ -2.23
RGPD4-201ENST00000408999 MT1AP04731 61 aa1.11□□□□□ -2.23
RGPD4-201ENST00000408999 PRM1P04553 51 aa1.09□□□□□ -2.23
RGPD4-201ENST00000408999 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.08□□□□□ -2.24
RGPD4-201ENST00000408999 LCE1BQ5T7P3 118 aa1.07□□□□□ -2.24
RGPD4-201ENST00000408999 LCE5AQ5TCM9 118 aa1.07□□□□□ -2.24
RGPD4-201ENST00000408999 KRTAP6-1Q3LI64 71 aa1.06□□□□□ -2.24
RGPD4-201ENST00000408999 KRTAP5-2Q701N4 177 aa1.05□□□□□ -2.24
RGPD4-201ENST00000408999 KRTAP6-2Q3LI66 62 aa1.04□□□□□ -2.24
RGPD4-201ENST00000408999 LCE1FQ5T754 118 aa1.04□□□□□ -2.24
RGPD4-201ENST00000408999 KRTAP4-11Q9BYQ6 195 aa1.02□□□□□ -2.25
RGPD4-201ENST00000408999 KRTAP5-9P26371 169 aa0.98□□□□□ -2.25
RGPD4-201ENST00000408999 KRTAP5-4Q6L8H1 288 aa0.9□□□□□ -2.27
RGPD4-201ENST00000408999 LCE1CQ5T751 118 aa0.9□□□□□ -2.27
RGPD4-201ENST00000408999 KRTAP20-2Q3LI61 65 aa0.89□□□□□ -2.27
RGPD4-201ENST00000408999 KRTAP5-1Q6L8H4 278 aa0.83□□□□□ -2.28
RGPD4-201ENST00000408999 KRTAP5-11Q6L8G4 156 aa0.79□□□□□ -2.28
RGPD4-201ENST00000408999 KRTAP4-4Q9BYR3 166 aa0.77□□□□□ -2.29
RGPD4-201ENST00000408999 KRTAP21-2Q3LI59 83 aa0.75□□□□□ -2.29
RGPD4-201ENST00000408999 KRTAP5-8O75690 187 aa0.74□□□□□ -2.29
RGPD4-201ENST00000408999 KRTAP21-1Q3LI58 79 aa0.73□□□□□ -2.29
RGPD4-201ENST00000408999 PHGR1C9JFL3 82 aa0.57□□□□□ -2.32
RGPD4-201ENST00000408999 MUC16Q8WXI7 14507 aa0.45□□□□□ -2.34
Retrieved 77 of 20,778 RNA–protein pairs in 13.4 ms