RNA–Protein interactions for RNA: ENST00000408454.1

SNORD88B-201, Transcript of small nucleolar RNA, C/D box 88B, humanhuman

BASIC

Gene SNORD88B, Length 91 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD88B-201ENST00000408454 KRTAP4-9Q9BYQ8 210 aa4.52□□□□□ -1.69
SNORD88B-201ENST00000408454 V9GYY9 64 aa4.48□□□□□ -1.69
SNORD88B-201ENST00000408454 KRTAP25-1Q3LHN0 102 aa4.47□□□□□ -1.69
SNORD88B-201ENST00000408454 LCE1DQ5T752 114 aa4.47□□□□□ -1.69
SNORD88B-201ENST00000408454 KRTAP12-3P60328 96 aa4.46□□□□□ -1.7
SNORD88B-201ENST00000408454 KRTAP19-4Q3LI73 84 aa4.46□□□□□ -1.7
SNORD88B-201ENST00000408454 MIR22HGQ0VDD5 57 aa4.44□□□□□ -1.7
SNORD88B-201ENST00000408454 MT4P47944 62 aa4.43□□□□□ -1.7
SNORD88B-201ENST00000408454 GPR98Q8WXG9 6306 aa4.42□□□□□ -1.7
SNORD88B-201ENST00000408454 KRTAP5-4Q6L8H1 288 aa4.37□□□□□ -1.71
SNORD88B-201ENST00000408454 KRTAP23-1A1A580 65 aa4.32□□□□□ -1.72
SNORD88B-201ENST00000408454 KRTAP12-4P60329 112 aa4.27□□□□□ -1.73
SNORD88B-201ENST00000408454 KRTAP4-3Q9BYR4 195 aa4.27□□□□□ -1.73
SNORD88B-201ENST00000408454 HMCN1Q96RW7 5635 aa4.27□□□□□ -1.73
SNORD88B-201ENST00000408454 Q1T7F1 81 aa4.25□□□□□ -1.73
SNORD88B-201ENST00000408454 SPRR5A0A1B0GTR4 108 aa4.22□□□□□ -1.73
SNORD88B-201ENST00000408454 PSPHP1O15172 72 aa4.22□□□□□ -1.73
SNORD88B-201ENST00000408454 KRTAP4-6Q9BYQ5 205 aa4.21□□□□□ -1.74
SNORD88B-201ENST00000408454 CDC42SE1Q9NRR8 79 aa4.21□□□□□ -1.74
SNORD88B-201ENST00000408454 A6NED7 52 aa4.2□□□□□ -1.74
SNORD88B-201ENST00000408454 KRTAP5-10Q6L8G5 202 aa4.17□□□□□ -1.74
SNORD88B-201ENST00000408454 KRTAP15-1Q3LI76 137 aa4.16□□□□□ -1.74
SNORD88B-201ENST00000408454 KRTAP4-7Q9BYR0 210 aa4.16□□□□□ -1.74
SNORD88B-201ENST00000408454 RPS28P62857 69 aaKnown RBP4.14□□□□□ -1.75
SNORD88B-201ENST00000408454 KRTAP20-2Q3LI61 65 aa4.14□□□□□ -1.75
SNORD88B-201ENST00000408454 KRTAP5-5Q701N2 237 aaPredicted RBP4.13□□□□□ -1.75
SNORD88B-201ENST00000408454 KRTAP5-3Q6L8H2 238 aa4.1□□□□□ -1.75
SNORD88B-201ENST00000408454 KRTAP5-7Q6L8G8 165 aa4.09□□□□□ -1.75
SNORD88B-201ENST00000408454 AHNAK2Q8IVF2 5795 aa4.08□□□□□ -1.76
SNORD88B-201ENST00000408454 LCE3CQ5T5A8 94 aa4.07□□□□□ -1.76
SNORD88B-201ENST00000408454 ROMO1P60602 79 aa4.06□□□□□ -1.76
SNORD88B-201ENST00000408454 LOC100996750A0A140TA64 210 aa3.95□□□□□ -1.78
SNORD88B-201ENST00000408454 MT1AP04731 61 aa3.92□□□□□ -1.78
SNORD88B-201ENST00000408454 SYNE1Q8NF91 8797 aaKnown RBP3.83□□□□□ -1.8
SNORD88B-201ENST00000408454 KRTAP4-11Q9BYQ6 195 aa3.82□□□□□ -1.8
SNORD88B-201ENST00000408454 KRTAP5-2Q701N4 177 aa3.81□□□□□ -1.8
SNORD88B-201ENST00000408454 KRTAP6-1Q3LI64 71 aa3.79□□□□□ -1.8
SNORD88B-201ENST00000408454 KRTAP9-4Q9BYQ2 154 aa3.78□□□□□ -1.8
SNORD88B-201ENST00000408454 PCP4P48539 62 aa3.74□□□□□ -1.81
SNORD88B-201ENST00000408454 KRTAP6-2Q3LI66 62 aa3.68□□□□□ -1.82
SNORD88B-201ENST00000408454 MT3P25713 68 aa3.67□□□□□ -1.82
SNORD88B-201ENST00000408454 KRTAP9-6A8MVA2 160 aa3.64□□□□□ -1.83
SNORD88B-201ENST00000408454 KRTAP5-8O75690 187 aa3.63□□□□□ -1.83
SNORD88B-201ENST00000408454 KRTAP9-9Q9BYP9 154 aa3.61□□□□□ -1.83
SNORD88B-201ENST00000408454 BRK1Q8WUW1 75 aa3.49□□□□□ -1.85
SNORD88B-201ENST00000408454 OBSCNQ5VST9 7968 aa3.48□□□□□ -1.85
SNORD88B-201ENST00000408454 MUC5ACP98088 5654 aa3.47□□□□□ -1.85
SNORD88B-201ENST00000408454 AHNAKQ09666 5890 aaKnown RBP3.45□□□□□ -1.86
SNORD88B-201ENST00000408454 LCE1EQ5T753 118 aa3.4□□□□□ -1.87
SNORD88B-201ENST00000408454 KRTAP5-1Q6L8H4 278 aa3.39□□□□□ -1.87
SNORD88B-201ENST00000408454 MUC5BQ9HC84 5762 aaPredicted RBP3.38□□□□□ -1.87
SNORD88B-201ENST00000408454 PMAIP1Q13794 54 aa3.31□□□□□ -1.88
SNORD88B-201ENST00000408454 LCE1CQ5T751 118 aa3.11□□□□□ -1.91
SNORD88B-201ENST00000408454 LCE1BQ5T7P3 118 aa3.11□□□□□ -1.91
SNORD88B-201ENST00000408454 KRTAP4-2Q9BYR5 136 aa3.04□□□□□ -1.92
SNORD88B-201ENST00000408454 PRAC1Q96KF2 57 aa3□□□□□ -1.93
SNORD88B-201ENST00000408454 LCE3DQ9BYE3 92 aa2.98□□□□□ -1.93
SNORD88B-201ENST00000408454 PRO0628Q9UI54 55 aa2.97□□□□□ -1.93
SNORD88B-201ENST00000408454 LUZP6Q538Z0 58 aa2.92□□□□□ -1.94
SNORD88B-201ENST00000408454 KTN1-AS1Q86SY8 53 aa2.88□□□□□ -1.95
SNORD88B-201ENST00000408454 LCE1FQ5T754 118 aa2.85□□□□□ -1.95
SNORD88B-201ENST00000408454 SVIPQ8NHG7 77 aa2.83□□□□□ -1.96
SNORD88B-201ENST00000408454 KRTAP5-11Q6L8G4 156 aa2.82□□□□□ -1.96
SNORD88B-201ENST00000408454 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.81□□□□□ -1.96
SNORD88B-201ENST00000408454 LCE3EQ5T5B0 92 aa2.8□□□□□ -1.96
SNORD88B-201ENST00000408454 KRTAP4-12Q9BQ66 201 aa2.73□□□□□ -1.97
SNORD88B-201ENST00000408454 PHGR1C9JFL3 82 aa2.5□□□□□ -2.01
SNORD88B-201ENST00000408454 KRTAP21-2Q3LI59 83 aa2.49□□□□□ -2.01
SNORD88B-201ENST00000408454 KRTAP4-4Q9BYR3 166 aa2.22□□□□□ -2.05
SNORD88B-201ENST00000408454 MUC19Q7Z5P9 8384 aa2.15□□□□□ -2.07
SNORD88B-201ENST00000408454 NDUFAF8A1L188 74 aa2.02□□□□□ -2.09
SNORD88B-201ENST00000408454 PRM1P04553 51 aa1.99□□□□□ -2.09
SNORD88B-201ENST00000408454 KRTAP21-1Q3LI58 79 aa1.97□□□□□ -2.09
SNORD88B-201ENST00000408454 INE1O15225 51 aa1.78□□□□□ -2.12
SNORD88B-201ENST00000408454 A0A0A0MQY5 61 aa1.75□□□□□ -2.13
SNORD88B-201ENST00000408454 MUC16Q8WXI7 14507 aa1.51□□□□□ -2.17
SNORD88B-201ENST00000408454 H3BS24 57 aa0.27□□□□□ -2.37
Retrieved 77 of 20,778 RNA–protein pairs in 5.9 ms