RNA–Protein interactions for RNA: ENST00000407540.7

MATN3-201, Transcript of matrilin 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene MATN3, Length 2,524 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATN3-201ENST00000407540 KRTAP19-4Q3LI73 84 aa5.78□□□□□ -1.48
MATN3-201ENST00000407540 KRTAP2-3P0C7H8 128 aa5.77□□□□□ -1.49
MATN3-201ENST00000407540 KRTAP2-4Q9BYR9 128 aa5.77□□□□□ -1.49
MATN3-201ENST00000407540 KRTAP2-1Q9BYU5 128 aa5.77□□□□□ -1.49
MATN3-201ENST00000407540 LOC100996750A0A140TA64 210 aa5.76□□□□□ -1.49
MATN3-201ENST00000407540 DSTQ03001 7570 aaKnown RBP5.68□□□□□ -1.5
MATN3-201ENST00000407540 MT1GP13640 62 aa5.65□□□□□ -1.5
MATN3-201ENST00000407540 CRCT1Q9UGL9 99 aa5.6□□□□□ -1.51
MATN3-201ENST00000407540 MT1MQ8N339 61 aa5.58□□□□□ -1.52
MATN3-201ENST00000407540 KRTAP19-3Q7Z4W3 81 aa5.56□□□□□ -1.52
MATN3-201ENST00000407540 MACF1Q9UPN3 7388 aaKnown RBP5.51□□□□□ -1.53
MATN3-201ENST00000407540 SPRR2FQ96RM1 72 aa5.46□□□□□ -1.54
MATN3-201ENST00000407540 KRTAP4-6Q9BYQ5 205 aa5.41□□□□□ -1.54
MATN3-201ENST00000407540 LCE5AQ5TCM9 118 aa5.38□□□□□ -1.55
MATN3-201ENST00000407540 KRTAP9-2Q9BYQ4 174 aa5.38□□□□□ -1.55
MATN3-201ENST00000407540 SYNE2Q8WXH0 6885 aaKnown RBP5.36□□□□□ -1.55
MATN3-201ENST00000407540 MDN1Q9NU22 5596 aa5.34□□□□□ -1.55
MATN3-201ENST00000407540 SYNE1Q8NF91 8797 aaKnown RBP5.28□□□□□ -1.56
MATN3-201ENST00000407540 KRTAP12-4P60329 112 aa5.25□□□□□ -1.57
MATN3-201ENST00000407540 LCE3BQ5TA77 95 aa5.22□□□□□ -1.57
MATN3-201ENST00000407540 KRTAP4-9Q9BYQ8 210 aa5.19□□□□□ -1.58
MATN3-201ENST00000407540 KRTAP6-1Q3LI64 71 aa5.11□□□□□ -1.59
MATN3-201ENST00000407540 LCE1AQ5T7P2 110 aa5.06□□□□□ -1.6
MATN3-201ENST00000407540 KRTAP5-9P26371 169 aa4.96□□□□□ -1.62
MATN3-201ENST00000407540 MT1AP04731 61 aa4.95□□□□□ -1.62
MATN3-201ENST00000407540 SPRR2EP22531 72 aa4.94□□□□□ -1.62
MATN3-201ENST00000407540 SPRR2BP35325 72 aa4.94□□□□□ -1.62
MATN3-201ENST00000407540 SPRR2AP35326 72 aa4.94□□□□□ -1.62
MATN3-201ENST00000407540 KRTAP5-5Q701N2 237 aaPredicted RBP4.9□□□□□ -1.62
MATN3-201ENST00000407540 KRTAP9-6A0A140TA67 174 aa4.89□□□□□ -1.63
MATN3-201ENST00000407540 OBSCNQ5VST9 7968 aa4.87□□□□□ -1.63
MATN3-201ENST00000407540 LCE3DQ9BYE3 92 aa4.81□□□□□ -1.64
MATN3-201ENST00000407540 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.8□□□□□ -1.64
MATN3-201ENST00000407540 KRTAP9-7A8MTY7 169 aa4.77□□□□□ -1.65
MATN3-201ENST00000407540 PRM1P04553 51 aa4.75□□□□□ -1.65
MATN3-201ENST00000407540 LCE3EQ5T5B0 92 aa4.72□□□□□ -1.65
MATN3-201ENST00000407540 SPRR2DP22532 72 aa4.71□□□□□ -1.66
MATN3-201ENST00000407540 KRTAP6-3Q3LI67 103 aa4.7□□□□□ -1.66
MATN3-201ENST00000407540 KRTAP9-4Q9BYQ2 154 aa4.68□□□□□ -1.66
MATN3-201ENST00000407540 KRTAP6-2Q3LI66 62 aa4.6□□□□□ -1.67
MATN3-201ENST00000407540 KRTAP2-2Q9BYT5 123 aa4.56□□□□□ -1.68
MATN3-201ENST00000407540 MT3P25713 68 aa4.43□□□□□ -1.7
MATN3-201ENST00000407540 NEBP20929 6669 aa4.35□□□□□ -1.71
MATN3-201ENST00000407540 KRTAP9-9Q9BYP9 154 aa4.33□□□□□ -1.72
MATN3-201ENST00000407540 KRTAP4-12Q9BQ66 201 aa4.29□□□□□ -1.72
MATN3-201ENST00000407540 KRTAP5-4Q6L8H1 288 aa4.28□□□□□ -1.72
MATN3-201ENST00000407540 MT4P47944 62 aa4.26□□□□□ -1.73
MATN3-201ENST00000407540 LCE1EQ5T753 118 aa4.25□□□□□ -1.73
MATN3-201ENST00000407540 LCE1DQ5T752 114 aa4.21□□□□□ -1.74
MATN3-201ENST00000407540 KRTAP4-2Q9BYR5 136 aa4.12□□□□□ -1.75
MATN3-201ENST00000407540 KRTAP5-3Q6L8H2 238 aa4.1□□□□□ -1.75
MATN3-201ENST00000407540 HMCN1Q96RW7 5635 aa4.09□□□□□ -1.75
MATN3-201ENST00000407540 KRTAP20-2Q3LI61 65 aa4.09□□□□□ -1.76
MATN3-201ENST00000407540 KRTAP5-2Q701N4 177 aa4□□□□□ -1.77
MATN3-201ENST00000407540 KRTAP20-1Q3LI63 56 aa3.98□□□□□ -1.77
MATN3-201ENST00000407540 LCE4AQ5TA78 99 aa3.96□□□□□ -1.77
MATN3-201ENST00000407540 KRTAP4-11Q9BYQ6 195 aa3.88□□□□□ -1.79
MATN3-201ENST00000407540 MUC5ACP98088 5654 aa3.87□□□□□ -1.79
MATN3-201ENST00000407540 LCE1BQ5T7P3 118 aa3.72□□□□□ -1.81
MATN3-201ENST00000407540 KRTAP5-10Q6L8G5 202 aa3.53□□□□□ -1.84
MATN3-201ENST00000407540 LCE1FQ5T754 118 aa3.46□□□□□ -1.86
MATN3-201ENST00000407540 KRTAP5-1Q6L8H4 278 aa3.46□□□□□ -1.86
MATN3-201ENST00000407540 LCE1CQ5T751 118 aa3.41□□□□□ -1.86
MATN3-201ENST00000407540 KRTAP21-2Q3LI59 83 aa3.27□□□□□ -1.89
MATN3-201ENST00000407540 AHNAK2Q8IVF2 5795 aa3.25□□□□□ -1.89
MATN3-201ENST00000407540 KRTAP5-8O75690 187 aa3.24□□□□□ -1.89
MATN3-201ENST00000407540 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.18□□□□□ -1.9
MATN3-201ENST00000407540 MUC19Q7Z5P9 8384 aa3.16□□□□□ -1.9
MATN3-201ENST00000407540 KRTAP4-4Q9BYR3 166 aa3.14□□□□□ -1.91
MATN3-201ENST00000407540 MUC5BQ9HC84 5762 aaPredicted RBP3.09□□□□□ -1.91
MATN3-201ENST00000407540 KRTAP5-7Q6L8G8 165 aa3.08□□□□□ -1.92
MATN3-201ENST00000407540 KRTAP21-1Q3LI58 79 aa3.03□□□□□ -1.92
MATN3-201ENST00000407540 KRTAP5-11Q6L8G4 156 aa2.92□□□□□ -1.94
MATN3-201ENST00000407540 GPR98Q8WXG9 6306 aa2.86□□□□□ -1.95
MATN3-201ENST00000407540 PHGR1C9JFL3 82 aa2.56□□□□□ -2
MATN3-201ENST00000407540 AHNAKQ09666 5890 aaKnown RBP2.36□□□□□ -2.03
MATN3-201ENST00000407540 MUC16Q8WXI7 14507 aa1.72□□□□□ -2.13
Retrieved 77 of 20,778 RNA–protein pairs in 92.8 ms