RNA–Protein interactions for RNA: ENST00000407249.7

CDK11B-204, Transcript of cyclin dependent kinase 11B, humanhuman

TSL 1 (best) BASIC

Gene CDK11B, Length 2,677 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11B-204ENST00000407249 KRTAP2-3P0C7H8 128 aa5.69□□□□□ -1.5
CDK11B-204ENST00000407249 KRTAP2-4Q9BYR9 128 aa5.69□□□□□ -1.5
CDK11B-204ENST00000407249 KRTAP2-1Q9BYU5 128 aa5.69□□□□□ -1.5
CDK11B-204ENST00000407249 KRTAP6-3Q3LI67 103 aa5.69□□□□□ -1.5
CDK11B-204ENST00000407249 KRTAP19-7Q3SYF9 63 aa5.69□□□□□ -1.5
CDK11B-204ENST00000407249 KRTAP4-7Q9BYR0 210 aa5.62□□□□□ -1.51
CDK11B-204ENST00000407249 MT1EP04732 61 aa5.58□□□□□ -1.52
CDK11B-204ENST00000407249 FCGBPQ9Y6R7 5405 aaPredicted RBP5.56□□□□□ -1.52
CDK11B-204ENST00000407249 KRTAP20-1Q3LI63 56 aa5.53□□□□□ -1.52
CDK11B-204ENST00000407249 MT1LQ93083 61 aa5.52□□□□□ -1.53
CDK11B-204ENST00000407249 NEBP20929 6669 aa5.45□□□□□ -1.54
CDK11B-204ENST00000407249 LCE1AQ5T7P2 110 aa5.39□□□□□ -1.55
CDK11B-204ENST00000407249 MACF1Q9UPN3 7388 aaKnown RBP5.37□□□□□ -1.55
CDK11B-204ENST00000407249 KRTAP12-4P60329 112 aa5.3□□□□□ -1.56
CDK11B-204ENST00000407249 KRTAP19-3Q7Z4W3 81 aa5.3□□□□□ -1.56
CDK11B-204ENST00000407249 SYNE2Q8WXH0 6885 aaKnown RBP5.3□□□□□ -1.56
CDK11B-204ENST00000407249 MT1GP13640 62 aa5.3□□□□□ -1.56
CDK11B-204ENST00000407249 LOC100996750A0A140TA64 210 aa5.23□□□□□ -1.57
CDK11B-204ENST00000407249 MT1MQ8N339 61 aa5.23□□□□□ -1.57
CDK11B-204ENST00000407249 SPRR2FQ96RM1 72 aa5.2□□□□□ -1.58
CDK11B-204ENST00000407249 KRTAP4-3Q9BYR4 195 aa5.2□□□□□ -1.58
CDK11B-204ENST00000407249 LCE5AQ5TCM9 118 aa5.16□□□□□ -1.58
CDK11B-204ENST00000407249 LCE1EQ5T753 118 aa5.14□□□□□ -1.59
CDK11B-204ENST00000407249 KRTAP5-9P26371 169 aa5.13□□□□□ -1.59
CDK11B-204ENST00000407249 MUC12Q9UKN1 5478 aa5.06□□□□□ -1.6
CDK11B-204ENST00000407249 LCE1DQ5T752 114 aa4.95□□□□□ -1.62
CDK11B-204ENST00000407249 GPR98Q8WXG9 6306 aa4.91□□□□□ -1.62
CDK11B-204ENST00000407249 DSTQ03001 7570 aaKnown RBP4.89□□□□□ -1.63
CDK11B-204ENST00000407249 SPRR2EP22531 72 aa4.86□□□□□ -1.63
CDK11B-204ENST00000407249 SPRR2BP35325 72 aa4.86□□□□□ -1.63
CDK11B-204ENST00000407249 SPRR2AP35326 72 aa4.86□□□□□ -1.63
CDK11B-204ENST00000407249 PRM1P04553 51 aa4.84□□□□□ -1.63
CDK11B-204ENST00000407249 LCE3BQ5TA77 95 aa4.83□□□□□ -1.64
CDK11B-204ENST00000407249 LCE1FQ5T754 118 aa4.78□□□□□ -1.64
CDK11B-204ENST00000407249 KRTAP4-9Q9BYQ8 210 aa4.78□□□□□ -1.64
CDK11B-204ENST00000407249 MT1AP04731 61 aa4.75□□□□□ -1.65
CDK11B-204ENST00000407249 MDN1Q9NU22 5596 aa4.75□□□□□ -1.65
CDK11B-204ENST00000407249 SYNE1Q8NF91 8797 aaKnown RBP4.71□□□□□ -1.65
CDK11B-204ENST00000407249 SPRR2DP22532 72 aa4.69□□□□□ -1.66
CDK11B-204ENST00000407249 KRTAP6-1Q3LI64 71 aa4.69□□□□□ -1.66
CDK11B-204ENST00000407249 KRTAP5-5Q701N2 237 aaPredicted RBP4.69□□□□□ -1.66
CDK11B-204ENST00000407249 LCE3DQ9BYE3 92 aa4.63□□□□□ -1.67
CDK11B-204ENST00000407249 LCE3EQ5T5B0 92 aa4.59□□□□□ -1.67
CDK11B-204ENST00000407249 KRTAP9-4Q9BYQ2 154 aa4.43□□□□□ -1.7
CDK11B-204ENST00000407249 KRTAP5-7Q6L8G8 165 aa4.41□□□□□ -1.7
CDK11B-204ENST00000407249 KRTAP5-10Q6L8G5 202 aa4.39□□□□□ -1.71
CDK11B-204ENST00000407249 KRTAP5-4Q6L8H1 288 aa4.32□□□□□ -1.72
CDK11B-204ENST00000407249 KRTAP6-2Q3LI66 62 aa4.3□□□□□ -1.72
CDK11B-204ENST00000407249 AHNAK2Q8IVF2 5795 aa4.29□□□□□ -1.72
CDK11B-204ENST00000407249 LCE4AQ5TA78 99 aa4.27□□□□□ -1.73
CDK11B-204ENST00000407249 MT3P25713 68 aa4.26□□□□□ -1.73
CDK11B-204ENST00000407249 HMCN1Q96RW7 5635 aa4.18□□□□□ -1.74
CDK11B-204ENST00000407249 OBSCNQ5VST9 7968 aa4.16□□□□□ -1.74
CDK11B-204ENST00000407249 KRTAP5-3Q6L8H2 238 aa4.06□□□□□ -1.76
CDK11B-204ENST00000407249 KRTAP4-6Q9BYQ5 205 aa4.02□□□□□ -1.77
CDK11B-204ENST00000407249 MT4P47944 62 aa4.01□□□□□ -1.77
CDK11B-204ENST00000407249 KRTAP20-2Q3LI61 65 aa4.01□□□□□ -1.77
CDK11B-204ENST00000407249 KRTAP5-2Q701N4 177 aa3.98□□□□□ -1.77
CDK11B-204ENST00000407249 AHNAKQ09666 5890 aaKnown RBP3.98□□□□□ -1.77
CDK11B-204ENST00000407249 MUC5BQ9HC84 5762 aaPredicted RBP3.9□□□□□ -1.79
CDK11B-204ENST00000407249 KRTAP9-9Q9BYP9 154 aa3.69□□□□□ -1.82
CDK11B-204ENST00000407249 MUC5ACP98088 5654 aa3.68□□□□□ -1.82
CDK11B-204ENST00000407249 KRTAP4-11Q9BYQ6 195 aa3.54□□□□□ -1.84
CDK11B-204ENST00000407249 KRTAP5-8O75690 187 aa3.47□□□□□ -1.85
CDK11B-204ENST00000407249 LCE1CQ5T751 118 aa3.42□□□□□ -1.86
CDK11B-204ENST00000407249 LCE1BQ5T7P3 118 aa3.42□□□□□ -1.86
CDK11B-204ENST00000407249 KRTAP4-12Q9BQ66 201 aa3.39□□□□□ -1.87
CDK11B-204ENST00000407249 MUC19Q7Z5P9 8384 aa3.38□□□□□ -1.87
CDK11B-204ENST00000407249 KRTAP5-1Q6L8H4 278 aa3.37□□□□□ -1.87
CDK11B-204ENST00000407249 KRTAP4-2Q9BYR5 136 aa3.33□□□□□ -1.88
CDK11B-204ENST00000407249 KRTAP21-1Q3LI58 79 aa3.24□□□□□ -1.89
CDK11B-204ENST00000407249 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.2□□□□□ -1.9
CDK11B-204ENST00000407249 KRTAP21-2Q3LI59 83 aa3.03□□□□□ -1.92
CDK11B-204ENST00000407249 KRTAP5-11Q6L8G4 156 aa2.95□□□□□ -1.94
CDK11B-204ENST00000407249 KRTAP4-4Q9BYR3 166 aa2.75□□□□□ -1.97
CDK11B-204ENST00000407249 PHGR1C9JFL3 82 aa2.51□□□□□ -2.01
CDK11B-204ENST00000407249 MUC16Q8WXI7 14507 aa1.68□□□□□ -2.14
Retrieved 77 of 20,778 RNA–protein pairs in 12.1 ms