RNA–Protein interactions for RNA: ENST00000406659.3

DNMT3A-206, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 1 (best) BASIC

Gene DNMT3A, Length 1,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-206ENST00000406659 MT1LQ93083 61 aa8.71□□□□□ -1.01
DNMT3A-206ENST00000406659 KRTAP4-7Q9BYR0 210 aa8.55□□□□□ -1.04
DNMT3A-206ENST00000406659 LCE3BQ5TA77 95 aa8.45□□□□□ -1.06
DNMT3A-206ENST00000406659 MACF1Q9UPN3 7388 aaKnown RBP8.42□□□□□ -1.06
DNMT3A-206ENST00000406659 KRTAP9-6A8MVA2 160 aa8.4□□□□□ -1.06
DNMT3A-206ENST00000406659 KRTAP19-3Q7Z4W3 81 aa8.38□□□□□ -1.07
DNMT3A-206ENST00000406659 SPRR2FQ96RM1 72 aa8.38□□□□□ -1.07
DNMT3A-206ENST00000406659 A0A0A0MQY5 61 aa8.35□□□□□ -1.07
DNMT3A-206ENST00000406659 MT1GP13640 62 aa8.35□□□□□ -1.07
DNMT3A-206ENST00000406659 KRTAP4-12Q9BQ66 201 aa8.31□□□□□ -1.08
DNMT3A-206ENST00000406659 MT1MQ8N339 61 aa8.27□□□□□ -1.08
DNMT3A-206ENST00000406659 MUC12Q9UKN1 5478 aa8.27□□□□□ -1.09
DNMT3A-206ENST00000406659 KRTAP9-9Q9BYP9 154 aa8.27□□□□□ -1.09
DNMT3A-206ENST00000406659 KRTAP9-4Q9BYQ2 154 aa8.27□□□□□ -1.09
DNMT3A-206ENST00000406659 KRTAP4-3Q9BYR4 195 aa8.2□□□□□ -1.1
DNMT3A-206ENST00000406659 SYNE2Q8WXH0 6885 aaKnown RBP8.18□□□□□ -1.1
DNMT3A-206ENST00000406659 LCE5AQ5TCM9 118 aa8.17□□□□□ -1.1
DNMT3A-206ENST00000406659 KRTAP5-9P26371 169 aa8.05□□□□□ -1.12
DNMT3A-206ENST00000406659 KRTAP6-3Q3LI67 103 aa8.01□□□□□ -1.13
DNMT3A-206ENST00000406659 KRTAP9-7A8MTY7 169 aa7.94□□□□□ -1.14
DNMT3A-206ENST00000406659 KRTAP2-3P0C7H8 128 aa7.94□□□□□ -1.14
DNMT3A-206ENST00000406659 KRTAP2-4Q9BYR9 128 aa7.94□□□□□ -1.14
DNMT3A-206ENST00000406659 KRTAP2-1Q9BYU5 128 aa7.94□□□□□ -1.14
DNMT3A-206ENST00000406659 LCE1AQ5T7P2 110 aa7.92□□□□□ -1.14
DNMT3A-206ENST00000406659 LCE1DQ5T752 114 aa7.89□□□□□ -1.15
DNMT3A-206ENST00000406659 SPRR2EP22531 72 aa7.84□□□□□ -1.15
DNMT3A-206ENST00000406659 SPRR2BP35325 72 aa7.84□□□□□ -1.15
DNMT3A-206ENST00000406659 SPRR2AP35326 72 aa7.84□□□□□ -1.15
DNMT3A-206ENST00000406659 MDN1Q9NU22 5596 aa7.8□□□□□ -1.16
DNMT3A-206ENST00000406659 KRTAP4-9Q9BYQ8 210 aa7.7□□□□□ -1.18
DNMT3A-206ENST00000406659 INE1O15225 51 aa7.69□□□□□ -1.18
DNMT3A-206ENST00000406659 KRTAP4-2Q9BYR5 136 aa7.63□□□□□ -1.19
DNMT3A-206ENST00000406659 DSTQ03001 7570 aaKnown RBP7.62□□□□□ -1.19
DNMT3A-206ENST00000406659 SPRR2DP22532 72 aa7.54□□□□□ -1.2
DNMT3A-206ENST00000406659 NEBP20929 6669 aa7.48□□□□□ -1.21
DNMT3A-206ENST00000406659 MT1AP04731 61 aa7.38□□□□□ -1.23
DNMT3A-206ENST00000406659 KRTAP5-5Q701N2 237 aaPredicted RBP7.38□□□□□ -1.23
DNMT3A-206ENST00000406659 KRTAP4-11Q9BYQ6 195 aa7.36□□□□□ -1.23
DNMT3A-206ENST00000406659 KRTAP6-1Q3LI64 71 aa7.35□□□□□ -1.23
DNMT3A-206ENST00000406659 LCE4AQ5TA78 99 aa7.13□□□□□ -1.27
DNMT3A-206ENST00000406659 KRTAP5-3Q6L8H2 238 aa7.1□□□□□ -1.27
DNMT3A-206ENST00000406659 KRTAP20-1Q3LI63 56 aa7□□□□□ -1.29
DNMT3A-206ENST00000406659 SYNE1Q8NF91 8797 aaKnown RBP6.96□□□□□ -1.3
DNMT3A-206ENST00000406659 KRTAP2-2Q9BYT5 123 aa6.9□□□□□ -1.31
DNMT3A-206ENST00000406659 KRTAP12-4P60329 112 aa6.86□□□□□ -1.31
DNMT3A-206ENST00000406659 KRTAP5-4Q6L8H1 288 aa6.83□□□□□ -1.32
DNMT3A-206ENST00000406659 LCE3DQ9BYE3 92 aa6.74□□□□□ -1.33
DNMT3A-206ENST00000406659 KRTAP6-2Q3LI66 62 aa6.71□□□□□ -1.34
DNMT3A-206ENST00000406659 MT3P25713 68 aa6.68□□□□□ -1.34
DNMT3A-206ENST00000406659 LCE3EQ5T5B0 92 aa6.59□□□□□ -1.35
DNMT3A-206ENST00000406659 MT4P47944 62 aa6.56□□□□□ -1.36
DNMT3A-206ENST00000406659 KRTAP20-2Q3LI61 65 aa6.41□□□□□ -1.38
DNMT3A-206ENST00000406659 HMCN1Q96RW7 5635 aa6.29□□□□□ -1.4
DNMT3A-206ENST00000406659 KRTAP5-2Q701N4 177 aa6.27□□□□□ -1.41
DNMT3A-206ENST00000406659 OBSCNQ5VST9 7968 aa6.04□□□□□ -1.44
DNMT3A-206ENST00000406659 PRM1P04553 51 aa5.98□□□□□ -1.45
DNMT3A-206ENST00000406659 AHNAK2Q8IVF2 5795 aa5.69□□□□□ -1.5
DNMT3A-206ENST00000406659 LCE1EQ5T753 118 aa5.65□□□□□ -1.5
DNMT3A-206ENST00000406659 KRTAP5-10Q6L8G5 202 aa5.48□□□□□ -1.53
DNMT3A-206ENST00000406659 LCE1BQ5T7P3 118 aa5.42□□□□□ -1.54
DNMT3A-206ENST00000406659 MUC5ACP98088 5654 aa5.41□□□□□ -1.54
DNMT3A-206ENST00000406659 KRTAP5-1Q6L8H4 278 aa5.37□□□□□ -1.55
DNMT3A-206ENST00000406659 GPR98Q8WXG9 6306 aa5.33□□□□□ -1.56
DNMT3A-206ENST00000406659 LCE1CQ5T751 118 aa5.29□□□□□ -1.56
DNMT3A-206ENST00000406659 KRTAP5-8O75690 187 aa5.27□□□□□ -1.57
DNMT3A-206ENST00000406659 KRTAP5-6Q6L8G9 129 aaPredicted RBP5.22□□□□□ -1.57
DNMT3A-206ENST00000406659 KRTAP5-7Q6L8G8 165 aa5.11□□□□□ -1.59
DNMT3A-206ENST00000406659 KRTAP5-11Q6L8G4 156 aa4.93□□□□□ -1.62
DNMT3A-206ENST00000406659 KRTAP21-2Q3LI59 83 aa4.78□□□□□ -1.64
DNMT3A-206ENST00000406659 MUC5BQ9HC84 5762 aaPredicted RBP4.61□□□□□ -1.67
DNMT3A-206ENST00000406659 AHNAKQ09666 5890 aaKnown RBP4.37□□□□□ -1.71
DNMT3A-206ENST00000406659 KRTAP4-4Q9BYR3 166 aa4.35□□□□□ -1.71
DNMT3A-206ENST00000406659 LCE1FQ5T754 118 aa4.03□□□□□ -1.76
DNMT3A-206ENST00000406659 PHGR1C9JFL3 82 aa3.97□□□□□ -1.77
DNMT3A-206ENST00000406659 KRTAP21-1Q3LI58 79 aa3.68□□□□□ -1.82
DNMT3A-206ENST00000406659 MUC19Q7Z5P9 8384 aa3.57□□□□□ -1.84
DNMT3A-206ENST00000406659 MUC16Q8WXI7 14507 aa2.66□□□□□ -1.98
Retrieved 77 of 20,778 RNA–protein pairs in 130 ms