RNA–Protein interactions for RNA: ENST00000406327.2

HMGB3P18-201, Transcript of high mobility group box 3 pseudogene 18, humanhuman

BASIC

Gene HMGB3P18, Length 590 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P18-201ENST00000406327 A0A0D9SG42 100 aa1.67□□□□□ -2.14
HMGB3P18-201ENST00000406327 M0QZ58 72 aa1.67□□□□□ -2.14
HMGB3P18-201ENST00000406327 KRTAP19-2Q3LHN2 52 aa1.66□□□□□ -2.14
HMGB3P18-201ENST00000406327 MYCBP2O75592 4640 aa1.65□□□□□ -2.15
HMGB3P18-201ENST00000406327 EPPK1P58107 5090 aaKnown RBP1.64□□□□□ -2.15
HMGB3P18-201ENST00000406327 CRIPTQ9P021 101 aa1.61□□□□□ -2.15
HMGB3P18-201ENST00000406327 ABCA13Q86UQ4 5058 aa1.6□□□□□ -2.15
HMGB3P18-201ENST00000406327 LRP2P98164 4655 aa1.59□□□□□ -2.15
HMGB3P18-201ENST00000406327 LPAP08519 4548 aa1.59□□□□□ -2.16
HMGB3P18-201ENST00000406327 HERC2O95714 4834 aa1.57□□□□□ -2.16
HMGB3P18-201ENST00000406327 C10orf95Q9H7T3 257 aa1.56□□□□□ -2.16
HMGB3P18-201ENST00000406327 BIRC6Q9NR09 4857 aa1.54□□□□□ -2.16
HMGB3P18-201ENST00000406327 MUC17Q685J3 4493 aa1.54□□□□□ -2.16
HMGB3P18-201ENST00000406327 MT1HP80294 61 aa1.53□□□□□ -2.16
HMGB3P18-201ENST00000406327 M0R2T5 61 aa1.52□□□□□ -2.17
HMGB3P18-201ENST00000406327 SPRR2GQ9BYE4 73 aa1.52□□□□□ -2.17
HMGB3P18-201ENST00000406327 PCLOQ9Y6V0 5065 aa1.51□□□□□ -2.17
HMGB3P18-201ENST00000406327 MT2AP02795 61 aa1.49□□□□□ -2.17
HMGB3P18-201ENST00000406327 MT1FP04733 61 aa1.49□□□□□ -2.17
HMGB3P18-201ENST00000406327 PLAC4Q8WY50 150 aa1.49□□□□□ -2.17
HMGB3P18-201ENST00000406327 HMCN2Q8NDA2 5059 aa1.48□□□□□ -2.17
HMGB3P18-201ENST00000406327 MUC2Q02817 5179 aa1.47□□□□□ -2.17
HMGB3P18-201ENST00000406327 TNP1P09430 55 aa1.47□□□□□ -2.17
HMGB3P18-201ENST00000406327 KRTAP19-8Q3LI54 63 aa1.47□□□□□ -2.17
HMGB3P18-201ENST00000406327 CRCT1Q9UGL9 99 aa1.47□□□□□ -2.17
HMGB3P18-201ENST00000406327 HERC1Q15751 4861 aa1.46□□□□□ -2.18
HMGB3P18-201ENST00000406327 FLGP20930 4061 aaPredicted RBP1.45□□□□□ -2.18
HMGB3P18-201ENST00000406327 MT1BP07438 61 aa1.44□□□□□ -2.18
HMGB3P18-201ENST00000406327 RNF213Q63HN8 5207 aa1.41□□□□□ -2.18
HMGB3P18-201ENST00000406327 MT1XP80297 61 aa1.41□□□□□ -2.18
HMGB3P18-201ENST00000406327 UBR4Q5T4S7 5183 aa1.4□□□□□ -2.18
HMGB3P18-201ENST00000406327 KRTAP8-1Q8IUC2 63 aa1.38□□□□□ -2.19
HMGB3P18-201ENST00000406327 FAT4Q6V0I7 4981 aa1.38□□□□□ -2.19
HMGB3P18-201ENST00000406327 KRTAP19-5Q3LI72 72 aa1.3□□□□□ -2.2
HMGB3P18-201ENST00000406327 KRTAP19-6Q3LI70 58 aa1.27□□□□□ -2.21
HMGB3P18-201ENST00000406327 KRTAP19-7Q3SYF9 63 aa1.25□□□□□ -2.21
HMGB3P18-201ENST00000406327 MT1EP04732 61 aa1.23□□□□□ -2.21
HMGB3P18-201ENST00000406327 USH2AO75445 5202 aa1.22□□□□□ -2.21
HMGB3P18-201ENST00000406327 MT1LQ93083 61 aa1.22□□□□□ -2.21
HMGB3P18-201ENST00000406327 FCGBPQ9Y6R7 5405 aaPredicted RBP1.21□□□□□ -2.22
HMGB3P18-201ENST00000406327 MT1GP13640 62 aa1.17□□□□□ -2.22
HMGB3P18-201ENST00000406327 SSPOA2VEC9 5147 aa1.17□□□□□ -2.22
HMGB3P18-201ENST00000406327 KRTAP2-3P0C7H8 128 aa1.16□□□□□ -2.22
HMGB3P18-201ENST00000406327 KRTAP19-3Q7Z4W3 81 aa1.16□□□□□ -2.22
HMGB3P18-201ENST00000406327 KRTAP2-4Q9BYR9 128 aa1.16□□□□□ -2.22
HMGB3P18-201ENST00000406327 KRTAP2-1Q9BYU5 128 aa1.16□□□□□ -2.22
HMGB3P18-201ENST00000406327 MT1MQ8N339 61 aa1.15□□□□□ -2.23
HMGB3P18-201ENST00000406327 SPRR2FQ96RM1 72 aa1.13□□□□□ -2.23
HMGB3P18-201ENST00000406327 KMT2DO14686 5537 aa1.13□□□□□ -2.23
HMGB3P18-201ENST00000406327 FSIP2Q5CZC0 6907 aa1.1□□□□□ -2.23
HMGB3P18-201ENST00000406327 SPRR2EP22531 72 aa1.04□□□□□ -2.24
HMGB3P18-201ENST00000406327 SPRR2BP35325 72 aa1.04□□□□□ -2.24
HMGB3P18-201ENST00000406327 SPRR2AP35326 72 aa1.04□□□□□ -2.24
HMGB3P18-201ENST00000406327 MT1AP04731 61 aa1.03□□□□□ -2.24
HMGB3P18-201ENST00000406327 KRTAP6-1Q3LI64 71 aa1.03□□□□□ -2.24
HMGB3P18-201ENST00000406327 MUC12Q9UKN1 5478 aa1.03□□□□□ -2.25
HMGB3P18-201ENST00000406327 SPRR2DP22532 72 aa1.01□□□□□ -2.25
HMGB3P18-201ENST00000406327 MACF1Q9UPN3 7388 aaKnown RBP0.98□□□□□ -2.25
HMGB3P18-201ENST00000406327 KRTAP20-1Q3LI63 56 aa0.97□□□□□ -2.25
HMGB3P18-201ENST00000406327 MDN1Q9NU22 5596 aa0.95□□□□□ -2.26
HMGB3P18-201ENST00000406327 SYNE1Q8NF91 8797 aaKnown RBP0.95□□□□□ -2.26
HMGB3P18-201ENST00000406327 GPR98Q8WXG9 6306 aa0.95□□□□□ -2.26
HMGB3P18-201ENST00000406327 DSTQ03001 7570 aaKnown RBP0.94□□□□□ -2.26
HMGB3P18-201ENST00000406327 SYNE2Q8WXH0 6885 aaKnown RBP0.93□□□□□ -2.26
HMGB3P18-201ENST00000406327 KRTAP6-2Q3LI66 62 aa0.93□□□□□ -2.26
HMGB3P18-201ENST00000406327 NEBP20929 6669 aa0.92□□□□□ -2.26
HMGB3P18-201ENST00000406327 PRM1P04553 51 aa0.87□□□□□ -2.27
HMGB3P18-201ENST00000406327 MT4P47944 62 aa0.87□□□□□ -2.27
HMGB3P18-201ENST00000406327 KRTAP20-2Q3LI61 65 aa0.87□□□□□ -2.27
HMGB3P18-201ENST00000406327 AHNAK2Q8IVF2 5795 aa0.81□□□□□ -2.28
HMGB3P18-201ENST00000406327 KRTAP5-10Q6L8G5 202 aa0.8□□□□□ -2.28
HMGB3P18-201ENST00000406327 AHNAKQ09666 5890 aaKnown RBP0.77□□□□□ -2.29
HMGB3P18-201ENST00000406327 MUC16Q8WXI7 14507 aa0.76□□□□□ -2.29
HMGB3P18-201ENST00000406327 MUC5BQ9HC84 5762 aaPredicted RBP0.74□□□□□ -2.29
HMGB3P18-201ENST00000406327 MUC5ACP98088 5654 aa0.69□□□□□ -2.3
HMGB3P18-201ENST00000406327 KRTAP21-1Q3LI58 79 aa0.66□□□□□ -2.3
HMGB3P18-201ENST00000406327 PHGR1C9JFL3 82 aa0.55□□□□□ -2.32
Retrieved 77 of 20,778 RNA–protein pairs in 81.7 ms