RNA–Protein interactions for RNA: ENST00000405807.8

COL4A3BP-204, Transcript of collagen type IV alpha 3 binding protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL4A3BP, Length 2,843 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-204ENST00000405807 MT1EP04732 61 aa5.38□□□□□ -1.55
COL4A3BP-204ENST00000405807 LCE2AQ5TA79 106 aaPredicted RBP5.38□□□□□ -1.55
COL4A3BP-204ENST00000405807 KRTAP6-3Q3LI67 103 aa5.31□□□□□ -1.56
COL4A3BP-204ENST00000405807 MUC12Q9UKN1 5478 aa5.3□□□□□ -1.56
COL4A3BP-204ENST00000405807 LCE1AQ5T7P2 110 aa5.3□□□□□ -1.56
COL4A3BP-204ENST00000405807 SSPOA2VEC9 5147 aa5.29□□□□□ -1.56
COL4A3BP-204ENST00000405807 FCGBPQ9Y6R7 5405 aaPredicted RBP5.26□□□□□ -1.57
COL4A3BP-204ENST00000405807 OBSCNQ5VST9 7968 aa5.25□□□□□ -1.57
COL4A3BP-204ENST00000405807 KRTAP9-6A0A140TA67 174 aa5.15□□□□□ -1.59
COL4A3BP-204ENST00000405807 LOC100996750A0A140TA64 210 aa5.13□□□□□ -1.59
COL4A3BP-204ENST00000405807 SYNE1Q8NF91 8797 aaKnown RBP5.09□□□□□ -1.59
COL4A3BP-204ENST00000405807 MT1GP13640 62 aa5.09□□□□□ -1.6
COL4A3BP-204ENST00000405807 LCE1EQ5T753 118 aa5.08□□□□□ -1.6
COL4A3BP-204ENST00000405807 KRTAP4-3Q9BYR4 195 aa5.08□□□□□ -1.6
COL4A3BP-204ENST00000405807 KRTAP19-6Q3LI70 58 aa5.03□□□□□ -1.6
COL4A3BP-204ENST00000405807 SYNE2Q8WXH0 6885 aaKnown RBP5.02□□□□□ -1.61
COL4A3BP-204ENST00000405807 MT1MQ8N339 61 aa5.01□□□□□ -1.61
COL4A3BP-204ENST00000405807 KRTAP19-3Q7Z4W3 81 aa4.98□□□□□ -1.61
COL4A3BP-204ENST00000405807 CRCT1Q9UGL9 99 aa4.96□□□□□ -1.62
COL4A3BP-204ENST00000405807 PRM1P04553 51 aa4.93□□□□□ -1.62
COL4A3BP-204ENST00000405807 MACF1Q9UPN3 7388 aaKnown RBP4.93□□□□□ -1.62
COL4A3BP-204ENST00000405807 LCE1DQ5T752 114 aa4.87□□□□□ -1.63
COL4A3BP-204ENST00000405807 KRTAP9-7A8MTY7 169 aa4.86□□□□□ -1.63
COL4A3BP-204ENST00000405807 KRTAP9-2Q9BYQ4 174 aa4.86□□□□□ -1.63
COL4A3BP-204ENST00000405807 MDN1Q9NU22 5596 aa4.84□□□□□ -1.63
COL4A3BP-204ENST00000405807 LCE3BQ5TA77 95 aa4.77□□□□□ -1.65
COL4A3BP-204ENST00000405807 LCE5AQ5TCM9 118 aa4.77□□□□□ -1.65
COL4A3BP-204ENST00000405807 MT1AP04731 61 aa4.73□□□□□ -1.65
COL4A3BP-204ENST00000405807 KRTAP5-5Q701N2 237 aaPredicted RBP4.7□□□□□ -1.66
COL4A3BP-204ENST00000405807 KRTAP4-9Q9BYQ8 210 aa4.68□□□□□ -1.66
COL4A3BP-204ENST00000405807 SPRR2FQ96RM1 72 aa4.66□□□□□ -1.66
COL4A3BP-204ENST00000405807 LCE3DQ9BYE3 92 aa4.62□□□□□ -1.67
COL4A3BP-204ENST00000405807 KRTAP6-1Q3LI64 71 aa4.6□□□□□ -1.67
COL4A3BP-204ENST00000405807 LCE3EQ5T5B0 92 aa4.59□□□□□ -1.68
COL4A3BP-204ENST00000405807 LCE1FQ5T754 118 aa4.58□□□□□ -1.68
COL4A3BP-204ENST00000405807 KRTAP6-2Q3LI66 62 aa4.38□□□□□ -1.71
COL4A3BP-204ENST00000405807 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.35□□□□□ -1.71
COL4A3BP-204ENST00000405807 KRTAP9-4Q9BYQ2 154 aa4.27□□□□□ -1.73
COL4A3BP-204ENST00000405807 KRTAP5-9P26371 169 aa4.22□□□□□ -1.73
COL4A3BP-204ENST00000405807 SPRR2EP22531 72 aa4.14□□□□□ -1.75
COL4A3BP-204ENST00000405807 SPRR2BP35325 72 aa4.14□□□□□ -1.75
COL4A3BP-204ENST00000405807 SPRR2AP35326 72 aa4.14□□□□□ -1.75
COL4A3BP-204ENST00000405807 MT3P25713 68 aa4.1□□□□□ -1.75
COL4A3BP-204ENST00000405807 KRTAP4-6Q9BYQ5 205 aa3.97□□□□□ -1.77
COL4A3BP-204ENST00000405807 SPRR2DP22532 72 aa3.96□□□□□ -1.78
COL4A3BP-204ENST00000405807 NEBP20929 6669 aa3.83□□□□□ -1.8
COL4A3BP-204ENST00000405807 MUC19Q7Z5P9 8384 aa3.74□□□□□ -1.81
COL4A3BP-204ENST00000405807 KRTAP20-1Q3LI63 56 aa3.74□□□□□ -1.81
COL4A3BP-204ENST00000405807 KRTAP5-4Q6L8H1 288 aa3.71□□□□□ -1.82
COL4A3BP-204ENST00000405807 KRTAP4-11Q9BYQ6 195 aa3.64□□□□□ -1.83
COL4A3BP-204ENST00000405807 MT4P47944 62 aa3.58□□□□□ -1.84
COL4A3BP-204ENST00000405807 KRTAP5-2Q701N4 177 aa3.52□□□□□ -1.85
COL4A3BP-204ENST00000405807 HMCN1Q96RW7 5635 aa3.52□□□□□ -1.85
COL4A3BP-204ENST00000405807 LCE4AQ5TA78 99 aa3.5□□□□□ -1.85
COL4A3BP-204ENST00000405807 KRTAP20-2Q3LI61 65 aa3.48□□□□□ -1.85
COL4A3BP-204ENST00000405807 MUC5ACP98088 5654 aa3.45□□□□□ -1.86
COL4A3BP-204ENST00000405807 KRTAP4-12Q9BQ66 201 aa3.42□□□□□ -1.86
COL4A3BP-204ENST00000405807 LCE1CQ5T751 118 aa3.38□□□□□ -1.87
COL4A3BP-204ENST00000405807 LCE1BQ5T7P3 118 aa3.38□□□□□ -1.87
COL4A3BP-204ENST00000405807 KRTAP9-9Q9BYP9 154 aa3.37□□□□□ -1.87
COL4A3BP-204ENST00000405807 KRTAP5-10Q6L8G5 202 aa3.32□□□□□ -1.88
COL4A3BP-204ENST00000405807 KRTAP5-3Q6L8H2 238 aa3.29□□□□□ -1.88
COL4A3BP-204ENST00000405807 KRTAP5-1Q6L8H4 278 aa3.24□□□□□ -1.89
COL4A3BP-204ENST00000405807 KRTAP21-1Q3LI58 79 aa3.17□□□□□ -1.9
COL4A3BP-204ENST00000405807 KRTAP4-2Q9BYR5 136 aa3.08□□□□□ -1.92
COL4A3BP-204ENST00000405807 MUC5BQ9HC84 5762 aaPredicted RBP3□□□□□ -1.93
COL4A3BP-204ENST00000405807 KRTAP21-2Q3LI59 83 aa2.96□□□□□ -1.94
COL4A3BP-204ENST00000405807 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.94□□□□□ -1.94
COL4A3BP-204ENST00000405807 AHNAK2Q8IVF2 5795 aa2.9□□□□□ -1.95
COL4A3BP-204ENST00000405807 KRTAP5-7Q6L8G8 165 aa2.87□□□□□ -1.95
COL4A3BP-204ENST00000405807 KRTAP4-4Q9BYR3 166 aa2.82□□□□□ -1.96
COL4A3BP-204ENST00000405807 GPR98Q8WXG9 6306 aa2.76□□□□□ -1.97
COL4A3BP-204ENST00000405807 KRTAP5-8O75690 187 aa2.73□□□□□ -1.97
COL4A3BP-204ENST00000405807 KRTAP5-11Q6L8G4 156 aa2.62□□□□□ -1.99
COL4A3BP-204ENST00000405807 AHNAKQ09666 5890 aaKnown RBP2.31□□□□□ -2.04
COL4A3BP-204ENST00000405807 PHGR1C9JFL3 82 aa2.26□□□□□ -2.05
COL4A3BP-204ENST00000405807 MUC16Q8WXI7 14507 aa1.58□□□□□ -2.16
Retrieved 77 of 20,778 RNA–protein pairs in 11.5 ms