RNA–Protein interactions for RNA: ENST00000405546.7

ATG4B-206, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2 BASIC

Gene ATG4B, Length 3,294 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-206ENST00000405546 KRTAP2-1Q9BYU5 128 aa5.08□□□□□ -1.6
ATG4B-206ENST00000405546 FCGBPQ9Y6R7 5405 aaPredicted RBP5.07□□□□□ -1.6
ATG4B-206ENST00000405546 LCE2DQ5TA82 110 aaPredicted RBP5.05□□□□□ -1.6
ATG4B-206ENST00000405546 KRTAP4-3Q9BYR4 195 aa5.04□□□□□ -1.6
ATG4B-206ENST00000405546 LOC100996750A0A140TA64 210 aa5.03□□□□□ -1.6
ATG4B-206ENST00000405546 SYNE1Q8NF91 8797 aaKnown RBP5.01□□□□□ -1.61
ATG4B-206ENST00000405546 KRTAP19-6Q3LI70 58 aa5□□□□□ -1.61
ATG4B-206ENST00000405546 KRTAP9-2Q9BYQ4 174 aa4.98□□□□□ -1.61
ATG4B-206ENST00000405546 MT1GP13640 62 aa4.98□□□□□ -1.61
ATG4B-206ENST00000405546 OBSCNQ5VST9 7968 aa4.96□□□□□ -1.62
ATG4B-206ENST00000405546 KRTAP12-4P60329 112 aa4.89□□□□□ -1.63
ATG4B-206ENST00000405546 SPRR2FQ96RM1 72 aa4.89□□□□□ -1.63
ATG4B-206ENST00000405546 KRTAP19-4Q3LI73 84 aa4.85□□□□□ -1.63
ATG4B-206ENST00000405546 KRTAP19-3Q7Z4W3 81 aa4.83□□□□□ -1.64
ATG4B-206ENST00000405546 MT1MQ8N339 61 aa4.82□□□□□ -1.64
ATG4B-206ENST00000405546 MACF1Q9UPN3 7388 aaKnown RBP4.79□□□□□ -1.64
ATG4B-206ENST00000405546 KRTAP4-9Q9BYQ8 210 aa4.76□□□□□ -1.65
ATG4B-206ENST00000405546 SYNE2Q8WXH0 6885 aaKnown RBP4.73□□□□□ -1.65
ATG4B-206ENST00000405546 LCE3BQ5TA77 95 aa4.67□□□□□ -1.66
ATG4B-206ENST00000405546 KRTAP9-6A0A140TA67 174 aa4.65□□□□□ -1.67
ATG4B-206ENST00000405546 MDN1Q9NU22 5596 aa4.61□□□□□ -1.67
ATG4B-206ENST00000405546 LCE5AQ5TCM9 118 aa4.59□□□□□ -1.67
ATG4B-206ENST00000405546 KRTAP9-7A8MTY7 169 aa4.48□□□□□ -1.69
ATG4B-206ENST00000405546 SPRR2EP22531 72 aa4.41□□□□□ -1.7
ATG4B-206ENST00000405546 SPRR2BP35325 72 aa4.41□□□□□ -1.7
ATG4B-206ENST00000405546 SPRR2AP35326 72 aa4.41□□□□□ -1.7
ATG4B-206ENST00000405546 KRTAP6-1Q3LI64 71 aa4.41□□□□□ -1.7
ATG4B-206ENST00000405546 PRM1P04553 51 aa4.4□□□□□ -1.7
ATG4B-206ENST00000405546 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.39□□□□□ -1.71
ATG4B-206ENST00000405546 LCE1AQ5T7P2 110 aa4.36□□□□□ -1.71
ATG4B-206ENST00000405546 LCE3DQ9BYE3 92 aa4.3□□□□□ -1.72
ATG4B-206ENST00000405546 MT1AP04731 61 aa4.27□□□□□ -1.73
ATG4B-206ENST00000405546 KRTAP6-3Q3LI67 103 aa4.24□□□□□ -1.73
ATG4B-206ENST00000405546 KRTAP5-9P26371 169 aa4.24□□□□□ -1.73
ATG4B-206ENST00000405546 LCE3EQ5T5B0 92 aa4.24□□□□□ -1.73
ATG4B-206ENST00000405546 KRTAP5-5Q701N2 237 aaPredicted RBP4.23□□□□□ -1.73
ATG4B-206ENST00000405546 SPRR2DP22532 72 aa4.21□□□□□ -1.74
ATG4B-206ENST00000405546 KRTAP6-2Q3LI66 62 aa4.09□□□□□ -1.75
ATG4B-206ENST00000405546 KRTAP9-4Q9BYQ2 154 aa4.04□□□□□ -1.76
ATG4B-206ENST00000405546 NEBP20929 6669 aa3.99□□□□□ -1.77
ATG4B-206ENST00000405546 MT3P25713 68 aa3.93□□□□□ -1.78
ATG4B-206ENST00000405546 MT4P47944 62 aa3.84□□□□□ -1.79
ATG4B-206ENST00000405546 KRTAP2-2Q9BYT5 123 aa3.8□□□□□ -1.8
ATG4B-206ENST00000405546 KRTAP20-1Q3LI63 56 aa3.74□□□□□ -1.81
ATG4B-206ENST00000405546 KRTAP4-6Q9BYQ5 205 aa3.73□□□□□ -1.81
ATG4B-206ENST00000405546 LCE1EQ5T753 118 aa3.72□□□□□ -1.81
ATG4B-206ENST00000405546 KRTAP5-4Q6L8H1 288 aa3.57□□□□□ -1.84
ATG4B-206ENST00000405546 LCE1DQ5T752 114 aa3.53□□□□□ -1.84
ATG4B-206ENST00000405546 HMCN1Q96RW7 5635 aa3.52□□□□□ -1.85
ATG4B-206ENST00000405546 KRTAP20-2Q3LI61 65 aa3.52□□□□□ -1.85
ATG4B-206ENST00000405546 LCE4AQ5TA78 99 aa3.49□□□□□ -1.85
ATG4B-206ENST00000405546 MUC19Q7Z5P9 8384 aa3.46□□□□□ -1.85
ATG4B-206ENST00000405546 LCE1FQ5T754 118 aa3.43□□□□□ -1.86
ATG4B-206ENST00000405546 LCE1BQ5T7P3 118 aa3.41□□□□□ -1.86
ATG4B-206ENST00000405546 KRTAP4-11Q9BYQ6 195 aa3.4□□□□□ -1.87
ATG4B-206ENST00000405546 MUC5ACP98088 5654 aa3.34□□□□□ -1.87
ATG4B-206ENST00000405546 KRTAP5-2Q701N4 177 aa3.31□□□□□ -1.88
ATG4B-206ENST00000405546 KRTAP5-3Q6L8H2 238 aa3.23□□□□□ -1.89
ATG4B-206ENST00000405546 GPR98Q8WXG9 6306 aa3.07□□□□□ -1.92
ATG4B-206ENST00000405546 AHNAK2Q8IVF2 5795 aa3.04□□□□□ -1.92
ATG4B-206ENST00000405546 KRTAP5-10Q6L8G5 202 aa3.01□□□□□ -1.93
ATG4B-206ENST00000405546 KRTAP4-2Q9BYR5 136 aa2.95□□□□□ -1.94
ATG4B-206ENST00000405546 KRTAP5-1Q6L8H4 278 aa2.9□□□□□ -1.95
ATG4B-206ENST00000405546 LCE1CQ5T751 118 aa2.89□□□□□ -1.95
ATG4B-206ENST00000405546 KRTAP4-4Q9BYR3 166 aa2.86□□□□□ -1.95
ATG4B-206ENST00000405546 KRTAP9-9Q9BYP9 154 aa2.84□□□□□ -1.96
ATG4B-206ENST00000405546 KRTAP5-8O75690 187 aa2.78□□□□□ -1.97
ATG4B-206ENST00000405546 MUC5BQ9HC84 5762 aaPredicted RBP2.75□□□□□ -1.97
ATG4B-206ENST00000405546 KRTAP21-2Q3LI59 83 aa2.75□□□□□ -1.97
ATG4B-206ENST00000405546 KRTAP5-7Q6L8G8 165 aa2.71□□□□□ -1.98
ATG4B-206ENST00000405546 KRTAP4-12Q9BQ66 201 aa2.69□□□□□ -1.98
ATG4B-206ENST00000405546 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.61□□□□□ -1.99
ATG4B-206ENST00000405546 KRTAP21-1Q3LI58 79 aa2.56□□□□□ -2
ATG4B-206ENST00000405546 KRTAP5-11Q6L8G4 156 aa2.46□□□□□ -2.02
ATG4B-206ENST00000405546 AHNAKQ09666 5890 aaKnown RBP2.37□□□□□ -2.03
ATG4B-206ENST00000405546 PHGR1C9JFL3 82 aa2.16□□□□□ -2.06
ATG4B-206ENST00000405546 MUC16Q8WXI7 14507 aa1.44□□□□□ -2.18
Retrieved 77 of 20,778 RNA–protein pairs in 12.4 ms