RNA–Protein interactions for RNA: ENST00000405315.8

NUCB1-201, Transcript of nucleobindin 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NUCB1, Length 2,668 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUCB1-201ENST00000405315 KRTAP2-4Q9BYR9 128 aa5□□□□□ -1.61
NUCB1-201ENST00000405315 KRTAP2-1Q9BYU5 128 aa5□□□□□ -1.61
NUCB1-201ENST00000405315 CRCT1Q9UGL9 99 aa4.98□□□□□ -1.61
NUCB1-201ENST00000405315 KRTAP19-6Q3LI70 58 aa4.93□□□□□ -1.62
NUCB1-201ENST00000405315 KRTAP4-3Q9BYR4 195 aa4.79□□□□□ -1.64
NUCB1-201ENST00000405315 LOC100996750A0A140TA64 210 aa4.78□□□□□ -1.64
NUCB1-201ENST00000405315 MT1GP13640 62 aa4.74□□□□□ -1.65
NUCB1-201ENST00000405315 MT1MQ8N339 61 aa4.73□□□□□ -1.65
NUCB1-201ENST00000405315 KRTAP19-3Q7Z4W3 81 aa4.72□□□□□ -1.65
NUCB1-201ENST00000405315 FCGBPQ9Y6R7 5405 aaPredicted RBP4.71□□□□□ -1.66
NUCB1-201ENST00000405315 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.65□□□□□ -1.67
NUCB1-201ENST00000405315 MUC12Q9UKN1 5478 aa4.65□□□□□ -1.67
NUCB1-201ENST00000405315 KRTAP9-7A8MTY7 169 aa4.59□□□□□ -1.67
NUCB1-201ENST00000405315 LCE5AQ5TCM9 118 aa4.54□□□□□ -1.68
NUCB1-201ENST00000405315 SPRR2FQ96RM1 72 aa4.54□□□□□ -1.68
NUCB1-201ENST00000405315 DSTQ03001 7570 aaKnown RBP4.52□□□□□ -1.69
NUCB1-201ENST00000405315 MACF1Q9UPN3 7388 aaKnown RBP4.44□□□□□ -1.7
NUCB1-201ENST00000405315 KRTAP12-4P60329 112 aa4.43□□□□□ -1.7
NUCB1-201ENST00000405315 LCE3BQ5TA77 95 aa4.4□□□□□ -1.7
NUCB1-201ENST00000405315 SYNE2Q8WXH0 6885 aaKnown RBP4.38□□□□□ -1.71
NUCB1-201ENST00000405315 KRTAP6-3Q3LI67 103 aa4.34□□□□□ -1.71
NUCB1-201ENST00000405315 KRTAP6-1Q3LI64 71 aa4.3□□□□□ -1.72
NUCB1-201ENST00000405315 KRTAP4-9Q9BYQ8 210 aa4.3□□□□□ -1.72
NUCB1-201ENST00000405315 MDN1Q9NU22 5596 aa4.26□□□□□ -1.73
NUCB1-201ENST00000405315 MT1AP04731 61 aa4.25□□□□□ -1.73
NUCB1-201ENST00000405315 LCE1AQ5T7P2 110 aa4.21□□□□□ -1.73
NUCB1-201ENST00000405315 KRTAP5-9P26371 169 aa4.17□□□□□ -1.74
NUCB1-201ENST00000405315 SYNE1Q8NF91 8797 aaKnown RBP4.16□□□□□ -1.74
NUCB1-201ENST00000405315 KRTAP5-5Q701N2 237 aaPredicted RBP4.16□□□□□ -1.74
NUCB1-201ENST00000405315 LCE3DQ9BYE3 92 aa4.14□□□□□ -1.75
NUCB1-201ENST00000405315 SPRR2EP22531 72 aa4.12□□□□□ -1.75
NUCB1-201ENST00000405315 SPRR2BP35325 72 aa4.12□□□□□ -1.75
NUCB1-201ENST00000405315 SPRR2AP35326 72 aa4.12□□□□□ -1.75
NUCB1-201ENST00000405315 NEBP20929 6669 aa4.11□□□□□ -1.75
NUCB1-201ENST00000405315 LCE3EQ5T5B0 92 aa4.09□□□□□ -1.75
NUCB1-201ENST00000405315 KRTAP20-1Q3LI63 56 aa4.03□□□□□ -1.76
NUCB1-201ENST00000405315 KRTAP9-4Q9BYQ2 154 aa3.99□□□□□ -1.77
NUCB1-201ENST00000405315 PRM1P04553 51 aa3.94□□□□□ -1.78
NUCB1-201ENST00000405315 SPRR2DP22532 72 aa3.94□□□□□ -1.78
NUCB1-201ENST00000405315 OBSCNQ5VST9 7968 aa3.87□□□□□ -1.79
NUCB1-201ENST00000405315 KRTAP6-2Q3LI66 62 aa3.85□□□□□ -1.79
NUCB1-201ENST00000405315 MT3P25713 68 aa3.81□□□□□ -1.8
NUCB1-201ENST00000405315 KRTAP2-2Q9BYT5 123 aa3.79□□□□□ -1.8
NUCB1-201ENST00000405315 KRTAP5-4Q6L8H1 288 aa3.63□□□□□ -1.83
NUCB1-201ENST00000405315 KRTAP4-6Q9BYQ5 205 aa3.51□□□□□ -1.85
NUCB1-201ENST00000405315 MT4P47944 62 aa3.48□□□□□ -1.85
NUCB1-201ENST00000405315 KRTAP20-2Q3LI61 65 aa3.42□□□□□ -1.86
NUCB1-201ENST00000405315 KRTAP5-2Q701N4 177 aa3.41□□□□□ -1.86
NUCB1-201ENST00000405315 LCE4AQ5TA78 99 aa3.39□□□□□ -1.87
NUCB1-201ENST00000405315 LCE1DQ5T752 114 aa3.37□□□□□ -1.87
NUCB1-201ENST00000405315 LCE1EQ5T753 118 aa3.33□□□□□ -1.88
NUCB1-201ENST00000405315 GPR98Q8WXG9 6306 aa3.31□□□□□ -1.88
NUCB1-201ENST00000405315 HMCN1Q96RW7 5635 aa3.28□□□□□ -1.88
NUCB1-201ENST00000405315 KRTAP5-3Q6L8H2 238 aa3.24□□□□□ -1.89
NUCB1-201ENST00000405315 MUC5ACP98088 5654 aa3.2□□□□□ -1.9
NUCB1-201ENST00000405315 AHNAK2Q8IVF2 5795 aa3.16□□□□□ -1.9
NUCB1-201ENST00000405315 KRTAP5-10Q6L8G5 202 aa3.16□□□□□ -1.9
NUCB1-201ENST00000405315 LCE1BQ5T7P3 118 aa3.09□□□□□ -1.91
NUCB1-201ENST00000405315 KRTAP5-7Q6L8G8 165 aa3.05□□□□□ -1.92
NUCB1-201ENST00000405315 KRTAP5-1Q6L8H4 278 aa2.98□□□□□ -1.93
NUCB1-201ENST00000405315 KRTAP4-11Q9BYQ6 195 aa2.97□□□□□ -1.93
NUCB1-201ENST00000405315 KRTAP4-2Q9BYR5 136 aa2.95□□□□□ -1.94
NUCB1-201ENST00000405315 LCE1CQ5T751 118 aa2.92□□□□□ -1.94
NUCB1-201ENST00000405315 KRTAP5-8O75690 187 aa2.76□□□□□ -1.97
NUCB1-201ENST00000405315 KRTAP21-2Q3LI59 83 aa2.76□□□□□ -1.97
NUCB1-201ENST00000405315 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.76□□□□□ -1.97
NUCB1-201ENST00000405315 LCE1FQ5T754 118 aa2.62□□□□□ -1.99
NUCB1-201ENST00000405315 KRTAP9-9Q9BYP9 154 aa2.62□□□□□ -1.99
NUCB1-201ENST00000405315 AHNAKQ09666 5890 aaKnown RBP2.61□□□□□ -1.99
NUCB1-201ENST00000405315 MUC19Q7Z5P9 8384 aa2.57□□□□□ -2
NUCB1-201ENST00000405315 MUC5BQ9HC84 5762 aaPredicted RBP2.57□□□□□ -2
NUCB1-201ENST00000405315 KRTAP4-4Q9BYR3 166 aa2.55□□□□□ -2
NUCB1-201ENST00000405315 KRTAP5-11Q6L8G4 156 aa2.52□□□□□ -2.01
NUCB1-201ENST00000405315 KRTAP21-1Q3LI58 79 aa2.46□□□□□ -2.01
NUCB1-201ENST00000405315 KRTAP4-12Q9BQ66 201 aa2.38□□□□□ -2.03
NUCB1-201ENST00000405315 PHGR1C9JFL3 82 aa2.17□□□□□ -2.06
NUCB1-201ENST00000405315 MUC16Q8WXI7 14507 aa1.46□□□□□ -2.18
Retrieved 77 of 20,778 RNA–protein pairs in 6.6 ms