RNA–Protein interactions for RNA: ENST00000404424.5

CLIP4-204, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLIP4, Length 2,480 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-204ENST00000404424 MT1GP13640 62 aa3.48□□□□□ -1.85
CLIP4-204ENST00000404424 KRTAP19-3Q7Z4W3 81 aa3.47□□□□□ -1.85
CLIP4-204ENST00000404424 MT1MQ8N339 61 aa3.46□□□□□ -1.86
CLIP4-204ENST00000404424 LOC100996750A0A140TA64 210 aa3.44□□□□□ -1.86
CLIP4-204ENST00000404424 KRTAP4-3Q9BYR4 195 aa3.44□□□□□ -1.86
CLIP4-204ENST00000404424 FCGBPQ9Y6R7 5405 aaPredicted RBP3.39□□□□□ -1.87
CLIP4-204ENST00000404424 LCE5AQ5TCM9 118 aa3.34□□□□□ -1.87
CLIP4-204ENST00000404424 MUC12Q9UKN1 5478 aa3.34□□□□□ -1.87
CLIP4-204ENST00000404424 FSIP2Q5CZC0 6907 aa3.33□□□□□ -1.88
CLIP4-204ENST00000404424 CRCT1Q9UGL9 99 aa3.32□□□□□ -1.88
CLIP4-204ENST00000404424 SPRR2FQ96RM1 72 aa3.29□□□□□ -1.88
CLIP4-204ENST00000404424 KRTAP4-6Q9BYQ5 205 aa3.28□□□□□ -1.88
CLIP4-204ENST00000404424 KRTAP9-4Q9BYQ2 154 aa3.27□□□□□ -1.89
CLIP4-204ENST00000404424 KRTAP12-4P60329 112 aa3.26□□□□□ -1.89
CLIP4-204ENST00000404424 KRTAP9-6A0A140TA67 174 aa3.18□□□□□ -1.9
CLIP4-204ENST00000404424 KRTAP9-7A8MTY7 169 aa3.18□□□□□ -1.9
CLIP4-204ENST00000404424 MT1AP04731 61 aa3.18□□□□□ -1.9
CLIP4-204ENST00000404424 LCE3BQ5TA77 95 aa3.17□□□□□ -1.9
CLIP4-204ENST00000404424 DSTQ03001 7570 aaKnown RBP3.16□□□□□ -1.9
CLIP4-204ENST00000404424 KRTAP9-9Q9BYP9 154 aa3.14□□□□□ -1.91
CLIP4-204ENST00000404424 KRTAP6-1Q3LI64 71 aa3.13□□□□□ -1.91
CLIP4-204ENST00000404424 LCE4AQ5TA78 99 aa3.12□□□□□ -1.91
CLIP4-204ENST00000404424 MACF1Q9UPN3 7388 aaKnown RBP3.11□□□□□ -1.91
CLIP4-204ENST00000404424 KRTAP5-9P26371 169 aa3.08□□□□□ -1.92
CLIP4-204ENST00000404424 KRTAP4-9Q9BYQ8 210 aa3.08□□□□□ -1.92
CLIP4-204ENST00000404424 LCE1AQ5T7P2 110 aa3.08□□□□□ -1.92
CLIP4-204ENST00000404424 KRTAP5-5Q701N2 237 aaPredicted RBP3.07□□□□□ -1.92
CLIP4-204ENST00000404424 LCE3DQ9BYE3 92 aa3.06□□□□□ -1.92
CLIP4-204ENST00000404424 SYNE1Q8NF91 8797 aaKnown RBP3.05□□□□□ -1.92
CLIP4-204ENST00000404424 LCE3EQ5T5B0 92 aa3.03□□□□□ -1.92
CLIP4-204ENST00000404424 MDN1Q9NU22 5596 aa3.01□□□□□ -1.93
CLIP4-204ENST00000404424 KRTAP9-2Q9BYQ4 174 aa3□□□□□ -1.93
CLIP4-204ENST00000404424 SPRR2EP22531 72 aa2.98□□□□□ -1.93
CLIP4-204ENST00000404424 SPRR2BP35325 72 aa2.98□□□□□ -1.93
CLIP4-204ENST00000404424 SPRR2AP35326 72 aa2.98□□□□□ -1.93
CLIP4-204ENST00000404424 SYNE2Q8WXH0 6885 aaKnown RBP2.95□□□□□ -1.94
CLIP4-204ENST00000404424 MT3P25713 68 aa2.93□□□□□ -1.94
CLIP4-204ENST00000404424 PRM1P04553 51 aa2.87□□□□□ -1.95
CLIP4-204ENST00000404424 SPRR2DP22532 72 aa2.86□□□□□ -1.95
CLIP4-204ENST00000404424 KRTAP4-12Q9BQ66 201 aa2.83□□□□□ -1.96
CLIP4-204ENST00000404424 LCE1FQ5T754 118 aa2.8□□□□□ -1.96
CLIP4-204ENST00000404424 KRTAP6-2Q3LI66 62 aa2.8□□□□□ -1.96
CLIP4-204ENST00000404424 KRTAP6-3Q3LI67 103 aa2.79□□□□□ -1.96
CLIP4-204ENST00000404424 KRTAP2-2Q9BYT5 123 aa2.73□□□□□ -1.97
CLIP4-204ENST00000404424 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.72□□□□□ -1.97
CLIP4-204ENST00000404424 KRTAP5-4Q6L8H1 288 aa2.68□□□□□ -1.98
CLIP4-204ENST00000404424 OBSCNQ5VST9 7968 aa2.57□□□□□ -2
CLIP4-204ENST00000404424 LCE1DQ5T752 114 aa2.55□□□□□ -2
CLIP4-204ENST00000404424 KRTAP5-2Q701N4 177 aa2.52□□□□□ -2.01
CLIP4-204ENST00000404424 KRTAP20-2Q3LI61 65 aa2.5□□□□□ -2.01
CLIP4-204ENST00000404424 KRTAP5-3Q6L8H2 238 aa2.5□□□□□ -2.01
CLIP4-204ENST00000404424 MT4P47944 62 aa2.48□□□□□ -2.01
CLIP4-204ENST00000404424 KRTAP4-2Q9BYR5 136 aa2.48□□□□□ -2.01
CLIP4-204ENST00000404424 NEBP20929 6669 aa2.47□□□□□ -2.01
CLIP4-204ENST00000404424 KRTAP20-1Q3LI63 56 aa2.37□□□□□ -2.03
CLIP4-204ENST00000404424 KRTAP4-11Q9BYQ6 195 aa2.33□□□□□ -2.04
CLIP4-204ENST00000404424 HMCN1Q96RW7 5635 aa2.33□□□□□ -2.04
CLIP4-204ENST00000404424 LCE1EQ5T753 118 aa2.32□□□□□ -2.04
CLIP4-204ENST00000404424 MUC5ACP98088 5654 aa2.32□□□□□ -2.04
CLIP4-204ENST00000404424 KRTAP5-10Q6L8G5 202 aa2.23□□□□□ -2.05
CLIP4-204ENST00000404424 LCE1BQ5T7P3 118 aa2.22□□□□□ -2.05
CLIP4-204ENST00000404424 KRTAP5-1Q6L8H4 278 aa2.22□□□□□ -2.05
CLIP4-204ENST00000404424 LCE1CQ5T751 118 aa2.18□□□□□ -2.06
CLIP4-204ENST00000404424 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.08□□□□□ -2.08
CLIP4-204ENST00000404424 MUC5BQ9HC84 5762 aaPredicted RBP2.06□□□□□ -2.08
CLIP4-204ENST00000404424 GPR98Q8WXG9 6306 aa2.04□□□□□ -2.08
CLIP4-204ENST00000404424 KRTAP21-2Q3LI59 83 aa2.03□□□□□ -2.08
CLIP4-204ENST00000404424 KRTAP5-8O75690 187 aa1.99□□□□□ -2.09
CLIP4-204ENST00000404424 KRTAP5-7Q6L8G8 165 aa1.98□□□□□ -2.09
CLIP4-204ENST00000404424 KRTAP5-11Q6L8G4 156 aa1.87□□□□□ -2.11
CLIP4-204ENST00000404424 KRTAP21-1Q3LI58 79 aa1.84□□□□□ -2.12
CLIP4-204ENST00000404424 AHNAK2Q8IVF2 5795 aa1.8□□□□□ -2.12
CLIP4-204ENST00000404424 KRTAP4-4Q9BYR3 166 aa1.79□□□□□ -2.12
CLIP4-204ENST00000404424 AHNAKQ09666 5890 aaKnown RBP1.69□□□□□ -2.14
CLIP4-204ENST00000404424 MUC19Q7Z5P9 8384 aa1.69□□□□□ -2.14
CLIP4-204ENST00000404424 PHGR1C9JFL3 82 aa1.6□□□□□ -2.15
CLIP4-204ENST00000404424 MUC16Q8WXI7 14507 aa1.1□□□□□ -2.23
Retrieved 77 of 20,778 RNA–protein pairs in 43.7 ms