RNA–Protein interactions for RNA: ENST00000404284.6

TOM1-203, Transcript of target of myb1 membrane trafficking protein, humanhuman

TSL 2

Gene TOM1, Length 2,622 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1-203ENST00000404284 KRTAP2-1Q9BYU5 128 aa5.36□□□□□ -1.55
TOM1-203ENST00000404284 KRTAP19-6Q3LI70 58 aa5.35□□□□□ -1.55
TOM1-203ENST00000404284 KRTAP9-2Q9BYQ4 174 aa5.27□□□□□ -1.57
TOM1-203ENST00000404284 FCGBPQ9Y6R7 5405 aaPredicted RBP5.24□□□□□ -1.57
TOM1-203ENST00000404284 KRTAP4-3Q9BYR4 195 aa5.13□□□□□ -1.59
TOM1-203ENST00000404284 LOC100996750A0A140TA64 210 aa5.11□□□□□ -1.59
TOM1-203ENST00000404284 MT1MQ8N339 61 aa5.08□□□□□ -1.6
TOM1-203ENST00000404284 KRTAP19-3Q7Z4W3 81 aa5.08□□□□□ -1.6
TOM1-203ENST00000404284 MUC12Q9UKN1 5478 aa5.07□□□□□ -1.6
TOM1-203ENST00000404284 CRCT1Q9UGL9 99 aa5.07□□□□□ -1.6
TOM1-203ENST00000404284 MT1GP13640 62 aa5.06□□□□□ -1.6
TOM1-203ENST00000404284 MACF1Q9UPN3 7388 aaKnown RBP5□□□□□ -1.61
TOM1-203ENST00000404284 KRTAP12-4P60329 112 aa4.96□□□□□ -1.62
TOM1-203ENST00000404284 SYNE2Q8WXH0 6885 aaKnown RBP4.92□□□□□ -1.62
TOM1-203ENST00000404284 LCE5AQ5TCM9 118 aa4.91□□□□□ -1.62
TOM1-203ENST00000404284 SPRR2FQ96RM1 72 aa4.87□□□□□ -1.63
TOM1-203ENST00000404284 KRTAP9-6A0A140TA67 174 aa4.82□□□□□ -1.64
TOM1-203ENST00000404284 DSTQ03001 7570 aaKnown RBP4.76□□□□□ -1.65
TOM1-203ENST00000404284 MDN1Q9NU22 5596 aa4.71□□□□□ -1.66
TOM1-203ENST00000404284 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.7□□□□□ -1.66
TOM1-203ENST00000404284 LCE3BQ5TA77 95 aa4.67□□□□□ -1.66
TOM1-203ENST00000404284 KRTAP5-9P26371 169 aa4.65□□□□□ -1.66
TOM1-203ENST00000404284 KRTAP6-1Q3LI64 71 aa4.61□□□□□ -1.67
TOM1-203ENST00000404284 KRTAP4-9Q9BYQ8 210 aa4.59□□□□□ -1.68
TOM1-203ENST00000404284 MT1AP04731 61 aa4.57□□□□□ -1.68
TOM1-203ENST00000404284 LCE1AQ5T7P2 110 aa4.57□□□□□ -1.68
TOM1-203ENST00000404284 KRTAP6-3Q3LI67 103 aa4.54□□□□□ -1.68
TOM1-203ENST00000404284 KRTAP5-5Q701N2 237 aaPredicted RBP4.51□□□□□ -1.69
TOM1-203ENST00000404284 SPRR2EP22531 72 aa4.48□□□□□ -1.69
TOM1-203ENST00000404284 SPRR2BP35325 72 aa4.48□□□□□ -1.69
TOM1-203ENST00000404284 SPRR2AP35326 72 aa4.48□□□□□ -1.69
TOM1-203ENST00000404284 SYNE1Q8NF91 8797 aaKnown RBP4.48□□□□□ -1.69
TOM1-203ENST00000404284 KRTAP9-7A8MTY7 169 aa4.47□□□□□ -1.69
TOM1-203ENST00000404284 PRM1P04553 51 aa4.47□□□□□ -1.69
TOM1-203ENST00000404284 LCE3DQ9BYE3 92 aa4.41□□□□□ -1.7
TOM1-203ENST00000404284 LCE3EQ5T5B0 92 aa4.35□□□□□ -1.71
TOM1-203ENST00000404284 NEBP20929 6669 aa4.31□□□□□ -1.72
TOM1-203ENST00000404284 SPRR2DP22532 72 aa4.3□□□□□ -1.72
TOM1-203ENST00000404284 KRTAP9-4Q9BYQ2 154 aa4.29□□□□□ -1.72
TOM1-203ENST00000404284 KRTAP2-2Q9BYT5 123 aa4.25□□□□□ -1.73
TOM1-203ENST00000404284 KRTAP6-2Q3LI66 62 aa4.12□□□□□ -1.75
TOM1-203ENST00000404284 MT3P25713 68 aa4.08□□□□□ -1.76
TOM1-203ENST00000404284 OBSCNQ5VST9 7968 aa4.05□□□□□ -1.76
TOM1-203ENST00000404284 LCE1EQ5T753 118 aa4.01□□□□□ -1.77
TOM1-203ENST00000404284 KRTAP5-4Q6L8H1 288 aa3.96□□□□□ -1.78
TOM1-203ENST00000404284 KRTAP20-1Q3LI63 56 aa3.89□□□□□ -1.79
TOM1-203ENST00000404284 LCE1DQ5T752 114 aa3.85□□□□□ -1.79
TOM1-203ENST00000404284 MT4P47944 62 aa3.8□□□□□ -1.8
TOM1-203ENST00000404284 KRTAP4-6Q9BYQ5 205 aa3.8□□□□□ -1.8
TOM1-203ENST00000404284 LCE4AQ5TA78 99 aa3.75□□□□□ -1.81
TOM1-203ENST00000404284 HMCN1Q96RW7 5635 aa3.74□□□□□ -1.81
TOM1-203ENST00000404284 KRTAP5-2Q701N4 177 aa3.72□□□□□ -1.81
TOM1-203ENST00000404284 KRTAP20-2Q3LI61 65 aa3.71□□□□□ -1.82
TOM1-203ENST00000404284 KRTAP5-3Q6L8H2 238 aa3.54□□□□□ -1.84
TOM1-203ENST00000404284 MUC5ACP98088 5654 aa3.46□□□□□ -1.85
TOM1-203ENST00000404284 LCE1FQ5T754 118 aa3.4□□□□□ -1.86
TOM1-203ENST00000404284 KRTAP4-11Q9BYQ6 195 aa3.36□□□□□ -1.87
TOM1-203ENST00000404284 LCE1BQ5T7P3 118 aa3.27□□□□□ -1.89
TOM1-203ENST00000404284 KRTAP5-10Q6L8G5 202 aa3.25□□□□□ -1.89
TOM1-203ENST00000404284 AHNAK2Q8IVF2 5795 aa3.24□□□□□ -1.89
TOM1-203ENST00000404284 KRTAP5-1Q6L8H4 278 aa3.23□□□□□ -1.89
TOM1-203ENST00000404284 KRTAP4-2Q9BYR5 136 aa3.2□□□□□ -1.9
TOM1-203ENST00000404284 LCE1CQ5T751 118 aa3.16□□□□□ -1.9
TOM1-203ENST00000404284 KRTAP5-8O75690 187 aa3.06□□□□□ -1.92
TOM1-203ENST00000404284 MUC19Q7Z5P9 8384 aa3.05□□□□□ -1.92
TOM1-203ENST00000404284 GPR98Q8WXG9 6306 aa3.01□□□□□ -1.93
TOM1-203ENST00000404284 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.01□□□□□ -1.93
TOM1-203ENST00000404284 KRTAP21-2Q3LI59 83 aa2.99□□□□□ -1.93
TOM1-203ENST00000404284 KRTAP5-7Q6L8G8 165 aa2.91□□□□□ -1.94
TOM1-203ENST00000404284 KRTAP21-1Q3LI58 79 aa2.81□□□□□ -1.96
TOM1-203ENST00000404284 MUC5BQ9HC84 5762 aaPredicted RBP2.76□□□□□ -1.97
TOM1-203ENST00000404284 KRTAP5-11Q6L8G4 156 aa2.73□□□□□ -1.97
TOM1-203ENST00000404284 KRTAP9-9Q9BYP9 154 aa2.7□□□□□ -1.98
TOM1-203ENST00000404284 KRTAP4-4Q9BYR3 166 aa2.7□□□□□ -1.98
TOM1-203ENST00000404284 KRTAP4-12Q9BQ66 201 aa2.54□□□□□ -2
TOM1-203ENST00000404284 AHNAKQ09666 5890 aaKnown RBP2.46□□□□□ -2.02
TOM1-203ENST00000404284 PHGR1C9JFL3 82 aa2.36□□□□□ -2.03
TOM1-203ENST00000404284 MUC16Q8WXI7 14507 aa1.58□□□□□ -2.16
Retrieved 78 of 20,778 RNA–protein pairs in 11.4 ms