RNA–Protein interactions for RNA: ENST00000403890.7

NUP43-204, Transcript of nucleoporin 43, humanhuman

TSL 2

Gene NUP43, Length 1,012 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43-204ENST00000403890 MT1MQ8N339 61 aa3.32□□□□□ -1.88
NUP43-204ENST00000403890 J3QR89 54 aa3.3□□□□□ -1.88
NUP43-204ENST00000403890 KRTAP20-2Q3LI61 65 aa3.29□□□□□ -1.88
NUP43-204ENST00000403890 KRTAP5-2Q701N4 177 aa3.29□□□□□ -1.88
NUP43-204ENST00000403890 LCE3AQ5TA76 89 aa3.28□□□□□ -1.88
NUP43-204ENST00000403890 A0A1B0GV90 55 aa3.25□□□□□ -1.89
NUP43-204ENST00000403890 KRTAP19-5Q3LI72 72 aa3.25□□□□□ -1.89
NUP43-204ENST00000403890 SMIM20Q8N5G0 67 aa3.25□□□□□ -1.89
NUP43-204ENST00000403890 AHNAKQ09666 5890 aaKnown RBP3.24□□□□□ -1.89
NUP43-204ENST00000403890 MT1LQ93083 61 aa3.22□□□□□ -1.89
NUP43-204ENST00000403890 SEC61GP60059 68 aa3.21□□□□□ -1.9
NUP43-204ENST00000403890 SERP1Q9Y6X1 66 aa3.2□□□□□ -1.9
NUP43-204ENST00000403890 A0A0D9SG42 100 aa3.18□□□□□ -1.9
NUP43-204ENST00000403890 MUC5ACP98088 5654 aa3.17□□□□□ -1.9
NUP43-204ENST00000403890 KRTAP12-4P60329 112 aa3.16□□□□□ -1.9
NUP43-204ENST00000403890 KRTAP13-4Q3LI77 160 aa3.16□□□□□ -1.9
NUP43-204ENST00000403890 SPINT4Q6UDR6 99 aa3.16□□□□□ -1.9
NUP43-204ENST00000403890 SPANXA2-OT1Q8N9U9 137 aa3.15□□□□□ -1.91
NUP43-204ENST00000403890 SNURFQ9Y675 71 aa3.14□□□□□ -1.91
NUP43-204ENST00000403890 MUC5BQ9HC84 5762 aaPredicted RBP3.12□□□□□ -1.91
NUP43-204ENST00000403890 A0A1B0GU33 70 aa3.09□□□□□ -1.91
NUP43-204ENST00000403890 PCP4P48539 62 aa3.08□□□□□ -1.92
NUP43-204ENST00000403890 SPATA8Q6RVD6 105 aa3.08□□□□□ -1.92
NUP43-204ENST00000403890 KRTAP5-5Q701N2 237 aaPredicted RBP3.08□□□□□ -1.92
NUP43-204ENST00000403890 KRTAP5-8O75690 187 aa3.06□□□□□ -1.92
NUP43-204ENST00000403890 SYNE1Q8NF91 8797 aaKnown RBP3.05□□□□□ -1.92
NUP43-204ENST00000403890 COA5Q86WW8 74 aa3.05□□□□□ -1.92
NUP43-204ENST00000403890 SMIM26A0A096LP01 95 aa3.04□□□□□ -1.92
NUP43-204ENST00000403890 K7ERU9 68 aa3.04□□□□□ -1.92
NUP43-204ENST00000403890 TNP1P09430 55 aa3.03□□□□□ -1.92
NUP43-204ENST00000403890 LCE3EQ5T5B0 92 aa3.03□□□□□ -1.92
NUP43-204ENST00000403890 SERP2Q8N6R1 65 aa3.02□□□□□ -1.93
NUP43-204ENST00000403890 KRTAP12-1P59990 96 aa3.01□□□□□ -1.93
NUP43-204ENST00000403890 C10orf95Q9H7T3 257 aa3□□□□□ -1.93
NUP43-204ENST00000403890 A0A0A0MQY5 61 aa2.99□□□□□ -1.93
NUP43-204ENST00000403890 A0A1B0GU69 56 aa2.97□□□□□ -1.93
NUP43-204ENST00000403890 SVIPQ8NHG7 77 aa2.96□□□□□ -1.94
NUP43-204ENST00000403890 NDUFAF8A1L188 74 aa2.95□□□□□ -1.94
NUP43-204ENST00000403890 LCE1CQ5T751 118 aa2.92□□□□□ -1.94
NUP43-204ENST00000403890 LCE1BQ5T7P3 118 aa2.92□□□□□ -1.94
NUP43-204ENST00000403890 A8MU10 97 aa2.91□□□□□ -1.94
NUP43-204ENST00000403890 KRTAP12-3P60328 96 aa2.88□□□□□ -1.95
NUP43-204ENST00000403890 COX7CP15954 63 aa2.87□□□□□ -1.95
NUP43-204ENST00000403890 PRR15LQ9BU68 103 aa2.87□□□□□ -1.95
NUP43-204ENST00000403890 H7BZZ5 65 aa2.82□□□□□ -1.96
NUP43-204ENST00000403890 CCDC179H3BU77 68 aa2.74□□□□□ -1.97
NUP43-204ENST00000403890 UQCR11O14957 56 aa2.74□□□□□ -1.97
NUP43-204ENST00000403890 KRTAP25-1Q3LHN0 102 aa2.74□□□□□ -1.97
NUP43-204ENST00000403890 KRTAP6-1Q3LI64 71 aa2.74□□□□□ -1.97
NUP43-204ENST00000403890 MT1AP04731 61 aa2.73□□□□□ -1.97
NUP43-204ENST00000403890 KRTAP6-2Q3LI66 62 aa2.73□□□□□ -1.97
NUP43-204ENST00000403890 ANAPC13Q9BS18 74 aa2.73□□□□□ -1.97
NUP43-204ENST00000403890 K7ERS5 55 aa2.72□□□□□ -1.97
NUP43-204ENST00000403890 LINC01558Q9Y6Z2 57 aa2.71□□□□□ -1.98
NUP43-204ENST00000403890 ATP5EP56381 51 aaPredicted RBP2.68□□□□□ -1.98
NUP43-204ENST00000403890 MIR22HGQ0VDD5 57 aa2.64□□□□□ -1.99
NUP43-204ENST00000403890 TMEM258P61165 79 aa2.55□□□□□ -2
NUP43-204ENST00000403890 RPS28P62857 69 aaKnown RBP2.53□□□□□ -2
NUP43-204ENST00000403890 V9GYY9 64 aa2.51□□□□□ -2.01
NUP43-204ENST00000403890 PRAC1Q96KF2 57 aa2.48□□□□□ -2.01
NUP43-204ENST00000403890 CDC42SE1Q9NRR8 79 aa2.48□□□□□ -2.01
NUP43-204ENST00000403890 Q1T7F1 81 aa2.47□□□□□ -2.01
NUP43-204ENST00000403890 PSPHP1O15172 72 aa2.46□□□□□ -2.02
NUP43-204ENST00000403890 A6NED7 52 aa2.41□□□□□ -2.02
NUP43-204ENST00000403890 ROMO1P60602 79 aa2.41□□□□□ -2.02
NUP43-204ENST00000403890 MUC19Q7Z5P9 8384 aa2.34□□□□□ -2.03
NUP43-204ENST00000403890 LCE3DQ9BYE3 92 aa2.32□□□□□ -2.04
NUP43-204ENST00000403890 PRO0628Q9UI54 55 aa2.26□□□□□ -2.05
NUP43-204ENST00000403890 BRK1Q8WUW1 75 aa2.25□□□□□ -2.05
NUP43-204ENST00000403890 PHGR1C9JFL3 82 aa2.19□□□□□ -2.06
NUP43-204ENST00000403890 PMAIP1Q13794 54 aa2.13□□□□□ -2.07
NUP43-204ENST00000403890 KRTAP21-2Q3LI59 83 aa2.07□□□□□ -2.08
NUP43-204ENST00000403890 KTN1-AS1Q86SY8 53 aa2.07□□□□□ -2.08
NUP43-204ENST00000403890 KRTAP21-1Q3LI58 79 aa1.68□□□□□ -2.14
NUP43-204ENST00000403890 LUZP6Q538Z0 58 aa1.58□□□□□ -2.16
NUP43-204ENST00000403890 INE1O15225 51 aa1.36□□□□□ -2.19
NUP43-204ENST00000403890 MUC16Q8WXI7 14507 aa1.27□□□□□ -2.21
NUP43-204ENST00000403890 PRM1P04553 51 aa1.19□□□□□ -2.22
Retrieved 78 of 20,778 RNA–protein pairs in 148.7 ms