RNA–Protein interactions for RNA: ENST00000402314.6

ATG3-202, Transcript of autophagy related 3, humanhuman

TSL 1 (best) BASIC

Gene ATG3, Length 3,010 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3-202ENST00000402314 OBSCNQ5VST9 7968 aa4.8□□□□□ -1.64
ATG3-202ENST00000402314 DSTQ03001 7570 aaKnown RBP4.78□□□□□ -1.64
ATG3-202ENST00000402314 KRTAP19-6Q3LI70 58 aa4.78□□□□□ -1.64
ATG3-202ENST00000402314 KRTAP4-3Q9BYR4 195 aa4.76□□□□□ -1.65
ATG3-202ENST00000402314 CRCT1Q9UGL9 99 aa4.73□□□□□ -1.65
ATG3-202ENST00000402314 LOC100996750A0A140TA64 210 aa4.72□□□□□ -1.65
ATG3-202ENST00000402314 LCE2DQ5TA82 110 aaPredicted RBP4.68□□□□□ -1.66
ATG3-202ENST00000402314 MT1GP13640 62 aa4.62□□□□□ -1.67
ATG3-202ENST00000402314 SYNE1Q8NF91 8797 aaKnown RBP4.61□□□□□ -1.67
ATG3-202ENST00000402314 MACF1Q9UPN3 7388 aaKnown RBP4.59□□□□□ -1.67
ATG3-202ENST00000402314 KRTAP12-4P60329 112 aa4.56□□□□□ -1.68
ATG3-202ENST00000402314 MT1MQ8N339 61 aa4.55□□□□□ -1.68
ATG3-202ENST00000402314 KRTAP19-3Q7Z4W3 81 aa4.53□□□□□ -1.68
ATG3-202ENST00000402314 SYNE2Q8WXH0 6885 aaKnown RBP4.52□□□□□ -1.69
ATG3-202ENST00000402314 KRTAP19-4Q3LI73 84 aa4.5□□□□□ -1.69
ATG3-202ENST00000402314 SPRR2FQ96RM1 72 aa4.5□□□□□ -1.69
ATG3-202ENST00000402314 MDN1Q9NU22 5596 aa4.48□□□□□ -1.69
ATG3-202ENST00000402314 KRTAP4-9Q9BYQ8 210 aa4.43□□□□□ -1.7
ATG3-202ENST00000402314 KRTAP9-2Q9BYQ4 174 aa4.41□□□□□ -1.7
ATG3-202ENST00000402314 LCE5AQ5TCM9 118 aa4.38□□□□□ -1.71
ATG3-202ENST00000402314 LCE3BQ5TA77 95 aa4.37□□□□□ -1.71
ATG3-202ENST00000402314 KRTAP9-7A8MTY7 169 aa4.17□□□□□ -1.74
ATG3-202ENST00000402314 KRTAP6-1Q3LI64 71 aa4.16□□□□□ -1.74
ATG3-202ENST00000402314 LCE1AQ5T7P2 110 aa4.15□□□□□ -1.75
ATG3-202ENST00000402314 PRM1P04553 51 aa4.09□□□□□ -1.75
ATG3-202ENST00000402314 SPRR2EP22531 72 aa4.08□□□□□ -1.76
ATG3-202ENST00000402314 SPRR2BP35325 72 aa4.08□□□□□ -1.76
ATG3-202ENST00000402314 SPRR2AP35326 72 aa4.08□□□□□ -1.76
ATG3-202ENST00000402314 KRTAP9-6A0A140TA67 174 aa4.07□□□□□ -1.76
ATG3-202ENST00000402314 KRTAP5-9P26371 169 aa4.05□□□□□ -1.76
ATG3-202ENST00000402314 LCE3DQ9BYE3 92 aa4.04□□□□□ -1.76
ATG3-202ENST00000402314 MT1AP04731 61 aa4.02□□□□□ -1.77
ATG3-202ENST00000402314 LCE3EQ5T5B0 92 aa3.98□□□□□ -1.77
ATG3-202ENST00000402314 KRTAP5-5Q701N2 237 aaPredicted RBP3.98□□□□□ -1.77
ATG3-202ENST00000402314 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.9□□□□□ -1.78
ATG3-202ENST00000402314 SPRR2DP22532 72 aa3.88□□□□□ -1.79
ATG3-202ENST00000402314 KRTAP6-2Q3LI66 62 aa3.83□□□□□ -1.8
ATG3-202ENST00000402314 KRTAP9-4Q9BYQ2 154 aa3.79□□□□□ -1.8
ATG3-202ENST00000402314 KRTAP6-3Q3LI67 103 aa3.72□□□□□ -1.81
ATG3-202ENST00000402314 MT3P25713 68 aa3.61□□□□□ -1.83
ATG3-202ENST00000402314 NEBP20929 6669 aa3.61□□□□□ -1.83
ATG3-202ENST00000402314 KRTAP4-6Q9BYQ5 205 aa3.56□□□□□ -1.84
ATG3-202ENST00000402314 KRTAP2-2Q9BYT5 123 aa3.54□□□□□ -1.84
ATG3-202ENST00000402314 LCE1EQ5T753 118 aa3.54□□□□□ -1.84
ATG3-202ENST00000402314 MT4P47944 62 aa3.53□□□□□ -1.84
ATG3-202ENST00000402314 KRTAP5-4Q6L8H1 288 aa3.49□□□□□ -1.85
ATG3-202ENST00000402314 HMCN1Q96RW7 5635 aa3.43□□□□□ -1.86
ATG3-202ENST00000402314 LCE1DQ5T752 114 aa3.36□□□□□ -1.87
ATG3-202ENST00000402314 KRTAP20-2Q3LI61 65 aa3.35□□□□□ -1.87
ATG3-202ENST00000402314 KRTAP20-1Q3LI63 56 aa3.27□□□□□ -1.89
ATG3-202ENST00000402314 KRTAP5-2Q701N4 177 aa3.25□□□□□ -1.89
ATG3-202ENST00000402314 LCE4AQ5TA78 99 aa3.24□□□□□ -1.89
ATG3-202ENST00000402314 MUC5ACP98088 5654 aa3.2□□□□□ -1.9
ATG3-202ENST00000402314 KRTAP5-3Q6L8H2 238 aa3.16□□□□□ -1.9
ATG3-202ENST00000402314 KRTAP4-11Q9BYQ6 195 aa3.15□□□□□ -1.9
ATG3-202ENST00000402314 MUC19Q7Z5P9 8384 aa3.13□□□□□ -1.91
ATG3-202ENST00000402314 LCE1BQ5T7P3 118 aa3.07□□□□□ -1.92
ATG3-202ENST00000402314 KRTAP4-12Q9BQ66 201 aa2.98□□□□□ -1.93
ATG3-202ENST00000402314 LCE1FQ5T754 118 aa2.93□□□□□ -1.94
ATG3-202ENST00000402314 KRTAP9-9Q9BYP9 154 aa2.86□□□□□ -1.95
ATG3-202ENST00000402314 KRTAP4-2Q9BYR5 136 aa2.86□□□□□ -1.95
ATG3-202ENST00000402314 KRTAP5-10Q6L8G5 202 aa2.85□□□□□ -1.95
ATG3-202ENST00000402314 KRTAP5-1Q6L8H4 278 aa2.82□□□□□ -1.96
ATG3-202ENST00000402314 LCE1CQ5T751 118 aa2.76□□□□□ -1.97
ATG3-202ENST00000402314 AHNAK2Q8IVF2 5795 aa2.74□□□□□ -1.97
ATG3-202ENST00000402314 KRTAP5-8O75690 187 aa2.66□□□□□ -1.98
ATG3-202ENST00000402314 KRTAP21-2Q3LI59 83 aa2.66□□□□□ -1.98
ATG3-202ENST00000402314 KRTAP4-4Q9BYR3 166 aa2.66□□□□□ -1.98
ATG3-202ENST00000402314 MUC5BQ9HC84 5762 aaPredicted RBP2.64□□□□□ -1.99
ATG3-202ENST00000402314 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.55□□□□□ -2
ATG3-202ENST00000402314 GPR98Q8WXG9 6306 aa2.53□□□□□ -2
ATG3-202ENST00000402314 KRTAP5-7Q6L8G8 165 aa2.48□□□□□ -2.01
ATG3-202ENST00000402314 KRTAP21-1Q3LI58 79 aa2.42□□□□□ -2.02
ATG3-202ENST00000402314 KRTAP5-11Q6L8G4 156 aa2.37□□□□□ -2.03
ATG3-202ENST00000402314 PHGR1C9JFL3 82 aa2.08□□□□□ -2.08
ATG3-202ENST00000402314 AHNAKQ09666 5890 aaKnown RBP2.02□□□□□ -2.09
ATG3-202ENST00000402314 MUC16Q8WXI7 14507 aa1.36□□□□□ -2.19
Retrieved 77 of 20,778 RNA–protein pairs in 149.8 ms