RNA–Protein interactions for RNA: ENST00000401533.6

GAREM2-201, Transcript of GRB2 associated regulator of MAPK1 subtype 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GAREM2, Length 4,161 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAREM2-201ENST00000401533 KRTAP4-3Q9BYR4 195 aa6.21□□□□□ -1.42
GAREM2-201ENST00000401533 LOC100996750A0A140TA64 210 aa6.16□□□□□ -1.42
GAREM2-201ENST00000401533 LCE3BQ5TA77 95 aa6.16□□□□□ -1.42
GAREM2-201ENST00000401533 SSPOA2VEC9 5147 aa6.13□□□□□ -1.43
GAREM2-201ENST00000401533 KRTAP19-6Q3LI70 58 aa6.09□□□□□ -1.43
GAREM2-201ENST00000401533 KRTAP19-3Q7Z4W3 81 aa6.06□□□□□ -1.44
GAREM2-201ENST00000401533 KRTAP19-4Q3LI73 84 aa6.05□□□□□ -1.44
GAREM2-201ENST00000401533 KRTAP9-6A8MVA2 160 aa6.05□□□□□ -1.44
GAREM2-201ENST00000401533 KRTAP12-4P60329 112 aa5.99□□□□□ -1.45
GAREM2-201ENST00000401533 SYNE2Q8WXH0 6885 aaKnown RBP5.98□□□□□ -1.45
GAREM2-201ENST00000401533 MUC12Q9UKN1 5478 aa5.98□□□□□ -1.45
GAREM2-201ENST00000401533 SPRR2EP22531 72 aa5.98□□□□□ -1.45
GAREM2-201ENST00000401533 SPRR2BP35325 72 aa5.98□□□□□ -1.45
GAREM2-201ENST00000401533 SPRR2AP35326 72 aa5.98□□□□□ -1.45
GAREM2-201ENST00000401533 MT1MQ8N339 61 aa5.95□□□□□ -1.46
GAREM2-201ENST00000401533 LCE2DQ5TA82 110 aaPredicted RBP5.81□□□□□ -1.48
GAREM2-201ENST00000401533 KRTAP9-2Q9BYQ4 174 aa5.72□□□□□ -1.49
GAREM2-201ENST00000401533 SPRR2DP22532 72 aa5.71□□□□□ -1.5
GAREM2-201ENST00000401533 KRTAP4-9Q9BYQ8 210 aa5.69□□□□□ -1.5
GAREM2-201ENST00000401533 KRTAP2-3P0C7H8 128 aa5.68□□□□□ -1.5
GAREM2-201ENST00000401533 KRTAP2-4Q9BYR9 128 aa5.68□□□□□ -1.5
GAREM2-201ENST00000401533 KRTAP2-1Q9BYU5 128 aa5.68□□□□□ -1.5
GAREM2-201ENST00000401533 MACF1Q9UPN3 7388 aaKnown RBP5.65□□□□□ -1.51
GAREM2-201ENST00000401533 LCE3DQ9BYE3 92 aa5.64□□□□□ -1.51
GAREM2-201ENST00000401533 LCE3EQ5T5B0 92 aa5.51□□□□□ -1.53
GAREM2-201ENST00000401533 LCE5AQ5TCM9 118 aa5.48□□□□□ -1.53
GAREM2-201ENST00000401533 KRTAP6-1Q3LI64 71 aa5.39□□□□□ -1.55
GAREM2-201ENST00000401533 MT1AP04731 61 aa5.32□□□□□ -1.56
GAREM2-201ENST00000401533 LCE1AQ5T7P2 110 aa5.3□□□□□ -1.56
GAREM2-201ENST00000401533 MDN1Q9NU22 5596 aa5.28□□□□□ -1.56
GAREM2-201ENST00000401533 MT4P47944 62 aa5.27□□□□□ -1.57
GAREM2-201ENST00000401533 PRM1P04553 51 aa5.25□□□□□ -1.57
GAREM2-201ENST00000401533 MT3P25713 68 aa5.19□□□□□ -1.58
GAREM2-201ENST00000401533 KRTAP5-9P26371 169 aa5.14□□□□□ -1.59
GAREM2-201ENST00000401533 KRTAP6-2Q3LI66 62 aa5.07□□□□□ -1.6
GAREM2-201ENST00000401533 KRTAP9-6A0A140TA67 174 aa5.06□□□□□ -1.6
GAREM2-201ENST00000401533 KRTAP9-7A8MTY7 169 aa5.02□□□□□ -1.61
GAREM2-201ENST00000401533 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.02□□□□□ -1.61
GAREM2-201ENST00000401533 KRTAP9-4Q9BYQ2 154 aa4.95□□□□□ -1.62
GAREM2-201ENST00000401533 KRTAP6-3Q3LI67 103 aa4.92□□□□□ -1.62
GAREM2-201ENST00000401533 LCE1DQ5T752 114 aa4.9□□□□□ -1.62
GAREM2-201ENST00000401533 KRTAP5-5Q701N2 237 aaPredicted RBP4.86□□□□□ -1.63
GAREM2-201ENST00000401533 LCE1BQ5T7P3 118 aa4.85□□□□□ -1.63
GAREM2-201ENST00000401533 KRTAP4-6Q9BYQ5 205 aa4.61□□□□□ -1.67
GAREM2-201ENST00000401533 NEBP20929 6669 aa4.55□□□□□ -1.68
GAREM2-201ENST00000401533 MUC19Q7Z5P9 8384 aa4.47□□□□□ -1.69
GAREM2-201ENST00000401533 KRTAP20-1Q3LI63 56 aa4.45□□□□□ -1.7
GAREM2-201ENST00000401533 LCE4AQ5TA78 99 aa4.44□□□□□ -1.7
GAREM2-201ENST00000401533 KRTAP2-2Q9BYT5 123 aa4.43□□□□□ -1.7
GAREM2-201ENST00000401533 KRTAP5-4Q6L8H1 288 aa4.37□□□□□ -1.71
GAREM2-201ENST00000401533 KRTAP20-2Q3LI61 65 aa4.3□□□□□ -1.72
GAREM2-201ENST00000401533 MUC5ACP98088 5654 aa4.17□□□□□ -1.74
GAREM2-201ENST00000401533 HMCN1Q96RW7 5635 aa4.13□□□□□ -1.75
GAREM2-201ENST00000401533 KRTAP4-11Q9BYQ6 195 aa4.04□□□□□ -1.76
GAREM2-201ENST00000401533 KRTAP5-2Q701N4 177 aa4.03□□□□□ -1.76
GAREM2-201ENST00000401533 KRTAP5-3Q6L8H2 238 aa3.93□□□□□ -1.78
GAREM2-201ENST00000401533 KRTAP4-4Q9BYR3 166 aa3.8□□□□□ -1.8
GAREM2-201ENST00000401533 GPR98Q8WXG9 6306 aa3.77□□□□□ -1.81
GAREM2-201ENST00000401533 LCE1CQ5T751 118 aa3.71□□□□□ -1.81
GAREM2-201ENST00000401533 LCE1EQ5T753 118 aa3.71□□□□□ -1.81
GAREM2-201ENST00000401533 LCE1FQ5T754 118 aa3.71□□□□□ -1.81
GAREM2-201ENST00000401533 KRTAP4-12Q9BQ66 201 aa3.69□□□□□ -1.82
GAREM2-201ENST00000401533 KRTAP4-2Q9BYR5 136 aa3.69□□□□□ -1.82
GAREM2-201ENST00000401533 KRTAP9-9Q9BYP9 154 aa3.53□□□□□ -1.84
GAREM2-201ENST00000401533 AHNAK2Q8IVF2 5795 aa3.5□□□□□ -1.85
GAREM2-201ENST00000401533 KRTAP5-1Q6L8H4 278 aa3.49□□□□□ -1.85
GAREM2-201ENST00000401533 KRTAP5-10Q6L8G5 202 aa3.46□□□□□ -1.86
GAREM2-201ENST00000401533 KRTAP5-8O75690 187 aa3.34□□□□□ -1.88
GAREM2-201ENST00000401533 MUC5BQ9HC84 5762 aaPredicted RBP3.31□□□□□ -1.88
GAREM2-201ENST00000401533 KRTAP21-2Q3LI59 83 aa3.23□□□□□ -1.89
GAREM2-201ENST00000401533 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.19□□□□□ -1.9
GAREM2-201ENST00000401533 KRTAP5-7Q6L8G8 165 aa3.13□□□□□ -1.91
GAREM2-201ENST00000401533 KRTAP5-11Q6L8G4 156 aa3.01□□□□□ -1.93
GAREM2-201ENST00000401533 AHNAKQ09666 5890 aaKnown RBP2.92□□□□□ -1.94
GAREM2-201ENST00000401533 KRTAP21-1Q3LI58 79 aa2.65□□□□□ -1.98
GAREM2-201ENST00000401533 PHGR1C9JFL3 82 aa2.61□□□□□ -1.99
GAREM2-201ENST00000401533 MUC16Q8WXI7 14507 aa1.67□□□□□ -2.14
Retrieved 77 of 20,778 RNA–protein pairs in 64.5 ms