RNA–Protein interactions for RNA: ENST00000400555.7

PPP4R1-202, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PPP4R1, Length 3,885 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-202ENST00000400555 MT1LQ93083 61 aa4.32□□□□□ -1.72
PPP4R1-202ENST00000400555 LOC100996750A0A140TA64 210 aa4.32□□□□□ -1.72
PPP4R1-202ENST00000400555 MT1EP04732 61 aa4.31□□□□□ -1.72
PPP4R1-202ENST00000400555 OBSCNQ5VST9 7968 aa4.3□□□□□ -1.72
PPP4R1-202ENST00000400555 MT1GP13640 62 aa4.28□□□□□ -1.72
PPP4R1-202ENST00000400555 SPRR2FQ96RM1 72 aa4.16□□□□□ -1.74
PPP4R1-202ENST00000400555 KRTAP2-3P0C7H8 128 aa4.12□□□□□ -1.75
PPP4R1-202ENST00000400555 KRTAP2-4Q9BYR9 128 aa4.12□□□□□ -1.75
PPP4R1-202ENST00000400555 KRTAP2-1Q9BYU5 128 aa4.12□□□□□ -1.75
PPP4R1-202ENST00000400555 KRTAP19-6Q3LI70 58 aa4.1□□□□□ -1.75
PPP4R1-202ENST00000400555 SYNE2Q8WXH0 6885 aaKnown RBP4.1□□□□□ -1.75
PPP4R1-202ENST00000400555 MT1MQ8N339 61 aa4.05□□□□□ -1.76
PPP4R1-202ENST00000400555 KRTAP19-3Q7Z4W3 81 aa4.05□□□□□ -1.76
PPP4R1-202ENST00000400555 LCE3BQ5TA77 95 aa4.04□□□□□ -1.76
PPP4R1-202ENST00000400555 MACF1Q9UPN3 7388 aaKnown RBP4.01□□□□□ -1.77
PPP4R1-202ENST00000400555 KRTAP12-4P60329 112 aa4□□□□□ -1.77
PPP4R1-202ENST00000400555 KRTAP4-9Q9BYQ8 210 aa3.97□□□□□ -1.77
PPP4R1-202ENST00000400555 KRTAP19-4Q3LI73 84 aa3.94□□□□□ -1.78
PPP4R1-202ENST00000400555 MDN1Q9NU22 5596 aa3.9□□□□□ -1.79
PPP4R1-202ENST00000400555 LCE5AQ5TCM9 118 aa3.8□□□□□ -1.8
PPP4R1-202ENST00000400555 KRTAP6-1Q3LI64 71 aa3.75□□□□□ -1.81
PPP4R1-202ENST00000400555 SPRR2EP22531 72 aa3.73□□□□□ -1.81
PPP4R1-202ENST00000400555 SPRR2BP35325 72 aa3.73□□□□□ -1.81
PPP4R1-202ENST00000400555 SPRR2AP35326 72 aa3.73□□□□□ -1.81
PPP4R1-202ENST00000400555 LCE3DQ9BYE3 92 aa3.68□□□□□ -1.82
PPP4R1-202ENST00000400555 KRTAP9-2Q9BYQ4 174 aa3.66□□□□□ -1.82
PPP4R1-202ENST00000400555 LCE1AQ5T7P2 110 aa3.62□□□□□ -1.83
PPP4R1-202ENST00000400555 LCE3EQ5T5B0 92 aa3.6□□□□□ -1.83
PPP4R1-202ENST00000400555 MT1AP04731 61 aa3.58□□□□□ -1.84
PPP4R1-202ENST00000400555 KRTAP9-7A8MTY7 169 aa3.57□□□□□ -1.84
PPP4R1-202ENST00000400555 SPRR2DP22532 72 aa3.54□□□□□ -1.84
PPP4R1-202ENST00000400555 PRM1P04553 51 aa3.54□□□□□ -1.84
PPP4R1-202ENST00000400555 KRTAP6-2Q3LI66 62 aa3.42□□□□□ -1.86
PPP4R1-202ENST00000400555 KRTAP5-9P26371 169 aa3.37□□□□□ -1.87
PPP4R1-202ENST00000400555 KRTAP9-4Q9BYQ2 154 aa3.37□□□□□ -1.87
PPP4R1-202ENST00000400555 KRTAP5-5Q701N2 237 aaPredicted RBP3.36□□□□□ -1.87
PPP4R1-202ENST00000400555 MT3P25713 68 aa3.31□□□□□ -1.88
PPP4R1-202ENST00000400555 MT4P47944 62 aa3.3□□□□□ -1.88
PPP4R1-202ENST00000400555 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.25□□□□□ -1.89
PPP4R1-202ENST00000400555 KRTAP6-3Q3LI67 103 aa3.16□□□□□ -1.9
PPP4R1-202ENST00000400555 KRTAP4-6Q9BYQ5 205 aa3.16□□□□□ -1.9
PPP4R1-202ENST00000400555 KRTAP9-6A0A140TA67 174 aa3.09□□□□□ -1.91
PPP4R1-202ENST00000400555 LCE1DQ5T752 114 aa3.05□□□□□ -1.92
PPP4R1-202ENST00000400555 NEBP20929 6669 aa3.04□□□□□ -1.92
PPP4R1-202ENST00000400555 LCE1BQ5T7P3 118 aa2.99□□□□□ -1.93
PPP4R1-202ENST00000400555 KRTAP2-2Q9BYT5 123 aa2.98□□□□□ -1.93
PPP4R1-202ENST00000400555 HMCN1Q96RW7 5635 aa2.93□□□□□ -1.94
PPP4R1-202ENST00000400555 KRTAP20-2Q3LI61 65 aa2.91□□□□□ -1.94
PPP4R1-202ENST00000400555 LCE4AQ5TA78 99 aa2.88□□□□□ -1.95
PPP4R1-202ENST00000400555 KRTAP5-4Q6L8H1 288 aa2.87□□□□□ -1.95
PPP4R1-202ENST00000400555 KRTAP9-9Q9BYP9 154 aa2.84□□□□□ -1.96
PPP4R1-202ENST00000400555 MUC5ACP98088 5654 aa2.82□□□□□ -1.96
PPP4R1-202ENST00000400555 MUC19Q7Z5P9 8384 aa2.78□□□□□ -1.96
PPP4R1-202ENST00000400555 KRTAP4-11Q9BYQ6 195 aa2.75□□□□□ -1.97
PPP4R1-202ENST00000400555 KRTAP5-2Q701N4 177 aa2.67□□□□□ -1.98
PPP4R1-202ENST00000400555 KRTAP20-1Q3LI63 56 aa2.65□□□□□ -1.98
PPP4R1-202ENST00000400555 KRTAP5-3Q6L8H2 238 aa2.62□□□□□ -1.99
PPP4R1-202ENST00000400555 KRTAP5-10Q6L8G5 202 aa2.51□□□□□ -2.01
PPP4R1-202ENST00000400555 KRTAP4-4Q9BYR3 166 aa2.51□□□□□ -2.01
PPP4R1-202ENST00000400555 LCE1FQ5T754 118 aa2.5□□□□□ -2.01
PPP4R1-202ENST00000400555 LCE1EQ5T753 118 aa2.49□□□□□ -2.01
PPP4R1-202ENST00000400555 KRTAP4-2Q9BYR5 136 aa2.44□□□□□ -2.02
PPP4R1-202ENST00000400555 AHNAK2Q8IVF2 5795 aa2.39□□□□□ -2.03
PPP4R1-202ENST00000400555 MUC5BQ9HC84 5762 aaPredicted RBP2.38□□□□□ -2.03
PPP4R1-202ENST00000400555 KRTAP5-1Q6L8H4 278 aa2.37□□□□□ -2.03
PPP4R1-202ENST00000400555 KRTAP4-12Q9BQ66 201 aa2.37□□□□□ -2.03
PPP4R1-202ENST00000400555 LCE1CQ5T751 118 aa2.36□□□□□ -2.03
PPP4R1-202ENST00000400555 KRTAP21-2Q3LI59 83 aa2.28□□□□□ -2.04
PPP4R1-202ENST00000400555 KRTAP5-8O75690 187 aa2.22□□□□□ -2.05
PPP4R1-202ENST00000400555 GPR98Q8WXG9 6306 aa2.13□□□□□ -2.07
PPP4R1-202ENST00000400555 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.07□□□□□ -2.08
PPP4R1-202ENST00000400555 KRTAP5-11Q6L8G4 156 aa1.99□□□□□ -2.09
PPP4R1-202ENST00000400555 KRTAP21-1Q3LI58 79 aa1.96□□□□□ -2.1
PPP4R1-202ENST00000400555 KRTAP5-7Q6L8G8 165 aa1.93□□□□□ -2.1
PPP4R1-202ENST00000400555 AHNAKQ09666 5890 aaKnown RBP1.82□□□□□ -2.12
PPP4R1-202ENST00000400555 PHGR1C9JFL3 82 aa1.76□□□□□ -2.13
PPP4R1-202ENST00000400555 MUC16Q8WXI7 14507 aa1.18□□□□□ -2.22
Retrieved 77 of 20,778 RNA–protein pairs in 101.2 ms