RNA–Protein interactions for RNA: ENST00000399448.5

PTPN6-202, Transcript of protein tyrosine phosphatase, non-receptor type 6, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTPN6, Length 2,159 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6-202ENST00000399448 KRTAP4-7Q9BYR0 210 aa4.75□□□□□ -1.65
PTPN6-202ENST00000399448 KRTAP9-7A8MTY7 169 aa4.73□□□□□ -1.65
PTPN6-202ENST00000399448 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.71□□□□□ -1.65
PTPN6-202ENST00000399448 KRTAP2-3P0C7H8 128 aa4.61□□□□□ -1.67
PTPN6-202ENST00000399448 KRTAP2-4Q9BYR9 128 aa4.61□□□□□ -1.67
PTPN6-202ENST00000399448 KRTAP2-1Q9BYU5 128 aa4.61□□□□□ -1.67
PTPN6-202ENST00000399448 FCGBPQ9Y6R7 5405 aaPredicted RBP4.53□□□□□ -1.68
PTPN6-202ENST00000399448 KRTAP19-3Q7Z4W3 81 aa4.52□□□□□ -1.69
PTPN6-202ENST00000399448 MT1GP13640 62 aa4.51□□□□□ -1.69
PTPN6-202ENST00000399448 MT1MQ8N339 61 aa4.49□□□□□ -1.69
PTPN6-202ENST00000399448 KRTAP4-3Q9BYR4 195 aa4.48□□□□□ -1.69
PTPN6-202ENST00000399448 LOC100996750A0A140TA64 210 aa4.43□□□□□ -1.7
PTPN6-202ENST00000399448 MACF1Q9UPN3 7388 aaKnown RBP4.43□□□□□ -1.7
PTPN6-202ENST00000399448 SYNE2Q8WXH0 6885 aaKnown RBP4.42□□□□□ -1.7
PTPN6-202ENST00000399448 LCE5AQ5TCM9 118 aa4.38□□□□□ -1.71
PTPN6-202ENST00000399448 SPRR2FQ96RM1 72 aa4.37□□□□□ -1.71
PTPN6-202ENST00000399448 MUC12Q9UKN1 5478 aa4.37□□□□□ -1.71
PTPN6-202ENST00000399448 KRTAP6-3Q3LI67 103 aa4.33□□□□□ -1.72
PTPN6-202ENST00000399448 NEBP20929 6669 aa4.2□□□□□ -1.74
PTPN6-202ENST00000399448 DSTQ03001 7570 aaKnown RBP4.15□□□□□ -1.75
PTPN6-202ENST00000399448 KRTAP5-9P26371 169 aa4.14□□□□□ -1.75
PTPN6-202ENST00000399448 KRTAP20-1Q3LI63 56 aa4.14□□□□□ -1.75
PTPN6-202ENST00000399448 LCE1AQ5T7P2 110 aa4.12□□□□□ -1.75
PTPN6-202ENST00000399448 LCE3BQ5TA77 95 aa4.06□□□□□ -1.76
PTPN6-202ENST00000399448 MT1AP04731 61 aa4.04□□□□□ -1.76
PTPN6-202ENST00000399448 KRTAP6-1Q3LI64 71 aa4.04□□□□□ -1.76
PTPN6-202ENST00000399448 KRTAP12-4P60329 112 aa4.03□□□□□ -1.76
PTPN6-202ENST00000399448 SPRR2EP22531 72 aa4.02□□□□□ -1.77
PTPN6-202ENST00000399448 SPRR2BP35325 72 aa4.02□□□□□ -1.77
PTPN6-202ENST00000399448 SPRR2AP35326 72 aa4.02□□□□□ -1.77
PTPN6-202ENST00000399448 MDN1Q9NU22 5596 aa4□□□□□ -1.77
PTPN6-202ENST00000399448 KRTAP5-5Q701N2 237 aaPredicted RBP3.99□□□□□ -1.77
PTPN6-202ENST00000399448 KRTAP4-9Q9BYQ8 210 aa3.93□□□□□ -1.78
PTPN6-202ENST00000399448 GPR98Q8WXG9 6306 aa3.9□□□□□ -1.79
PTPN6-202ENST00000399448 SPRR2DP22532 72 aa3.85□□□□□ -1.79
PTPN6-202ENST00000399448 LCE3DQ9BYE3 92 aa3.84□□□□□ -1.79
PTPN6-202ENST00000399448 SYNE1Q8NF91 8797 aaKnown RBP3.84□□□□□ -1.8
PTPN6-202ENST00000399448 KRTAP9-4Q9BYQ2 154 aa3.82□□□□□ -1.8
PTPN6-202ENST00000399448 KRTAP2-2Q9BYT5 123 aa3.82□□□□□ -1.8
PTPN6-202ENST00000399448 LCE3EQ5T5B0 92 aa3.79□□□□□ -1.8
PTPN6-202ENST00000399448 MT3P25713 68 aa3.65□□□□□ -1.83
PTPN6-202ENST00000399448 KRTAP6-2Q3LI66 62 aa3.64□□□□□ -1.83
PTPN6-202ENST00000399448 KRTAP5-4Q6L8H1 288 aa3.58□□□□□ -1.84
PTPN6-202ENST00000399448 PRM1P04553 51 aa3.53□□□□□ -1.84
PTPN6-202ENST00000399448 KRTAP4-6Q9BYQ5 205 aa3.4□□□□□ -1.87
PTPN6-202ENST00000399448 LCE4AQ5TA78 99 aa3.39□□□□□ -1.87
PTPN6-202ENST00000399448 OBSCNQ5VST9 7968 aa3.37□□□□□ -1.87
PTPN6-202ENST00000399448 MT4P47944 62 aa3.36□□□□□ -1.87
PTPN6-202ENST00000399448 KRTAP20-2Q3LI61 65 aa3.34□□□□□ -1.88
PTPN6-202ENST00000399448 LCE1DQ5T752 114 aa3.34□□□□□ -1.88
PTPN6-202ENST00000399448 KRTAP5-2Q701N4 177 aa3.32□□□□□ -1.88
PTPN6-202ENST00000399448 HMCN1Q96RW7 5635 aa3.28□□□□□ -1.88
PTPN6-202ENST00000399448 AHNAK2Q8IVF2 5795 aa3.25□□□□□ -1.89
PTPN6-202ENST00000399448 KRTAP9-9Q9BYP9 154 aa3.24□□□□□ -1.89
PTPN6-202ENST00000399448 KRTAP5-10Q6L8G5 202 aa3.23□□□□□ -1.89
PTPN6-202ENST00000399448 KRTAP5-7Q6L8G8 165 aa3.21□□□□□ -1.9
PTPN6-202ENST00000399448 LCE1FQ5T754 118 aa3.19□□□□□ -1.9
PTPN6-202ENST00000399448 KRTAP5-3Q6L8H2 238 aa3.19□□□□□ -1.9
PTPN6-202ENST00000399448 LCE1EQ5T753 118 aa3.19□□□□□ -1.9
PTPN6-202ENST00000399448 MUC5BQ9HC84 5762 aaPredicted RBP3.16□□□□□ -1.9
PTPN6-202ENST00000399448 AHNAKQ09666 5890 aaKnown RBP3.12□□□□□ -1.91
PTPN6-202ENST00000399448 MUC5ACP98088 5654 aa2.97□□□□□ -1.93
PTPN6-202ENST00000399448 LCE1BQ5T7P3 118 aa2.91□□□□□ -1.94
PTPN6-202ENST00000399448 LCE1CQ5T751 118 aa2.84□□□□□ -1.96
PTPN6-202ENST00000399448 KRTAP4-2Q9BYR5 136 aa2.83□□□□□ -1.96
PTPN6-202ENST00000399448 KRTAP5-1Q6L8H4 278 aa2.82□□□□□ -1.96
PTPN6-202ENST00000399448 KRTAP4-11Q9BYQ6 195 aa2.8□□□□□ -1.96
PTPN6-202ENST00000399448 KRTAP5-8O75690 187 aa2.7□□□□□ -1.98
PTPN6-202ENST00000399448 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.68□□□□□ -1.98
PTPN6-202ENST00000399448 KRTAP21-2Q3LI59 83 aa2.63□□□□□ -1.99
PTPN6-202ENST00000399448 KRTAP4-12Q9BQ66 201 aa2.51□□□□□ -2.01
PTPN6-202ENST00000399448 KRTAP5-11Q6L8G4 156 aa2.44□□□□□ -2.02
PTPN6-202ENST00000399448 KRTAP4-4Q9BYR3 166 aa2.34□□□□□ -2.03
PTPN6-202ENST00000399448 KRTAP21-1Q3LI58 79 aa2.25□□□□□ -2.05
PTPN6-202ENST00000399448 PHGR1C9JFL3 82 aa2.11□□□□□ -2.07
PTPN6-202ENST00000399448 MUC19Q7Z5P9 8384 aa2.08□□□□□ -2.08
PTPN6-202ENST00000399448 MUC16Q8WXI7 14507 aa1.41□□□□□ -2.18
Retrieved 77 of 20,778 RNA–protein pairs in 8.9 ms