RNA–Protein interactions for RNA: ENST00000399218.8

GAREM1-202, Transcript of GRB2 associated regulator of MAPK1 subtype 1, humanhuman

APPRIS P3 TSL 2 BASIC

Gene GAREM1, Length 7,033 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAREM1-202ENST00000399218 MT4P47944 62 aa3.69□□□□□ -1.82
GAREM1-202ENST00000399218 KRTAP12-4P60329 112 aa3.66□□□□□ -1.82
GAREM1-202ENST00000399218 MT1EP04732 61 aa3.65□□□□□ -1.82
GAREM1-202ENST00000399218 KRTAP4-3Q9BYR4 195 aa3.64□□□□□ -1.83
GAREM1-202ENST00000399218 MT1LQ93083 61 aa3.62□□□□□ -1.83
GAREM1-202ENST00000399218 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.62□□□□□ -1.83
GAREM1-202ENST00000399218 SYNE2Q8WXH0 6885 aaKnown RBP3.6□□□□□ -1.83
GAREM1-202ENST00000399218 INE1O15225 51 aa3.6□□□□□ -1.83
GAREM1-202ENST00000399218 LOC100996750A0A140TA64 210 aa3.58□□□□□ -1.84
GAREM1-202ENST00000399218 MT1MQ8N339 61 aa3.54□□□□□ -1.84
GAREM1-202ENST00000399218 KRTAP20-1Q3LI63 56 aa3.54□□□□□ -1.84
GAREM1-202ENST00000399218 KRTAP19-4Q3LI73 84 aa3.51□□□□□ -1.85
GAREM1-202ENST00000399218 KRTAP6-3Q3LI67 103 aa3.46□□□□□ -1.86
GAREM1-202ENST00000399218 KRTAP19-7Q3SYF9 63 aa3.44□□□□□ -1.86
GAREM1-202ENST00000399218 KRTAP4-9Q9BYQ8 210 aa3.41□□□□□ -1.86
GAREM1-202ENST00000399218 USH2AO75445 5202 aa3.39□□□□□ -1.87
GAREM1-202ENST00000399218 KMT2DO14686 5537 aa3.39□□□□□ -1.87
GAREM1-202ENST00000399218 SPRR5A0A1B0GTR4 108 aa3.37□□□□□ -1.87
GAREM1-202ENST00000399218 MACF1Q9UPN3 7388 aaKnown RBP3.35□□□□□ -1.87
GAREM1-202ENST00000399218 KRTAP2-3P0C7H8 128 aa3.34□□□□□ -1.87
GAREM1-202ENST00000399218 KRTAP2-4Q9BYR9 128 aa3.34□□□□□ -1.87
GAREM1-202ENST00000399218 LCE1AQ5T7P2 110 aa3.33□□□□□ -1.88
GAREM1-202ENST00000399218 LCE3DQ9BYE3 92 aa3.3□□□□□ -1.88
GAREM1-202ENST00000399218 LCE1DQ5T752 114 aa3.25□□□□□ -1.89
GAREM1-202ENST00000399218 KRTAP2-2Q9BYT5 123 aa3.24□□□□□ -1.89
GAREM1-202ENST00000399218 KRTAP2-1Q9BYU5 128 aa3.24□□□□□ -1.89
GAREM1-202ENST00000399218 LCE1BQ5T7P3 118 aa3.23□□□□□ -1.89
GAREM1-202ENST00000399218 MT3P25713 68 aa3.23□□□□□ -1.89
GAREM1-202ENST00000399218 LCE5AQ5TCM9 118 aa3.21□□□□□ -1.9
GAREM1-202ENST00000399218 LCE3EQ5T5B0 92 aa3.18□□□□□ -1.9
GAREM1-202ENST00000399218 DSTQ03001 7570 aaKnown RBP3.17□□□□□ -1.9
GAREM1-202ENST00000399218 FCGBPQ9Y6R7 5405 aaPredicted RBP3.16□□□□□ -1.9
GAREM1-202ENST00000399218 MT1AP04731 61 aa3.13□□□□□ -1.91
GAREM1-202ENST00000399218 SYNE1Q8NF91 8797 aaKnown RBP3.12□□□□□ -1.91
GAREM1-202ENST00000399218 KRTAP6-1Q3LI64 71 aa3.12□□□□□ -1.91
GAREM1-202ENST00000399218 KRTAP6-2Q3LI66 62 aa3.09□□□□□ -1.91
GAREM1-202ENST00000399218 LCE4AQ5TA78 99 aa3.07□□□□□ -1.92
GAREM1-202ENST00000399218 SSPOA2VEC9 5147 aa3.06□□□□□ -1.92
GAREM1-202ENST00000399218 KRTAP9-6A8MVA2 160 aa3.05□□□□□ -1.92
GAREM1-202ENST00000399218 MUC12Q9UKN1 5478 aa3.04□□□□□ -1.92
GAREM1-202ENST00000399218 KRTAP5-9P26371 169 aa3.01□□□□□ -1.93
GAREM1-202ENST00000399218 KRTAP9-4Q9BYQ2 154 aa2.99□□□□□ -1.93
GAREM1-202ENST00000399218 NEBP20929 6669 aa2.96□□□□□ -1.94
GAREM1-202ENST00000399218 OBSCNQ5VST9 7968 aa2.96□□□□□ -1.94
GAREM1-202ENST00000399218 KRTAP4-6Q9BYQ5 205 aa2.92□□□□□ -1.94
GAREM1-202ENST00000399218 PRM1P04553 51 aa2.91□□□□□ -1.94
GAREM1-202ENST00000399218 LCE1CQ5T751 118 aa2.73□□□□□ -1.97
GAREM1-202ENST00000399218 LCE1EQ5T753 118 aa2.73□□□□□ -1.97
GAREM1-202ENST00000399218 LCE1FQ5T754 118 aa2.73□□□□□ -1.97
GAREM1-202ENST00000399218 KRTAP20-2Q3LI61 65 aa2.73□□□□□ -1.97
GAREM1-202ENST00000399218 KRTAP9-9Q9BYP9 154 aa2.71□□□□□ -1.98
GAREM1-202ENST00000399218 MDN1Q9NU22 5596 aa2.67□□□□□ -1.98
GAREM1-202ENST00000399218 KRTAP5-4Q6L8H1 288 aa2.54□□□□□ -2
GAREM1-202ENST00000399218 KRTAP4-12Q9BQ66 201 aa2.48□□□□□ -2.01
GAREM1-202ENST00000399218 KRTAP4-2Q9BYR5 136 aa2.48□□□□□ -2.01
GAREM1-202ENST00000399218 KRTAP4-11Q9BYQ6 195 aa2.48□□□□□ -2.01
GAREM1-202ENST00000399218 KRTAP5-5Q701N2 237 aaPredicted RBP2.43□□□□□ -2.02
GAREM1-202ENST00000399218 KRTAP4-4Q9BYR3 166 aa2.39□□□□□ -2.03
GAREM1-202ENST00000399218 KRTAP5-3Q6L8H2 238 aa2.39□□□□□ -2.03
GAREM1-202ENST00000399218 GPR98Q8WXG9 6306 aa2.3□□□□□ -2.04
GAREM1-202ENST00000399218 MUC5ACP98088 5654 aa2.23□□□□□ -2.05
GAREM1-202ENST00000399218 KRTAP5-8O75690 187 aa2.21□□□□□ -2.06
GAREM1-202ENST00000399218 HMCN1Q96RW7 5635 aa2.16□□□□□ -2.06
GAREM1-202ENST00000399218 MUC19Q7Z5P9 8384 aa2.09□□□□□ -2.07
GAREM1-202ENST00000399218 KRTAP5-2Q701N4 177 aa2.03□□□□□ -2.08
GAREM1-202ENST00000399218 AHNAK2Q8IVF2 5795 aa1.97□□□□□ -2.09
GAREM1-202ENST00000399218 KRTAP5-10Q6L8G5 202 aa1.91□□□□□ -2.1
GAREM1-202ENST00000399218 KRTAP5-1Q6L8H4 278 aa1.87□□□□□ -2.11
GAREM1-202ENST00000399218 PHGR1C9JFL3 82 aa1.87□□□□□ -2.11
GAREM1-202ENST00000399218 KRTAP5-7Q6L8G8 165 aa1.76□□□□□ -2.13
GAREM1-202ENST00000399218 MUC5BQ9HC84 5762 aaPredicted RBP1.74□□□□□ -2.13
GAREM1-202ENST00000399218 AHNAKQ09666 5890 aaKnown RBP1.71□□□□□ -2.14
GAREM1-202ENST00000399218 KRTAP5-11Q6L8G4 156 aa1.68□□□□□ -2.14
GAREM1-202ENST00000399218 KRTAP21-2Q3LI59 83 aa1.64□□□□□ -2.15
GAREM1-202ENST00000399218 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.46□□□□□ -2.18
GAREM1-202ENST00000399218 KRTAP21-1Q3LI58 79 aa1.2□□□□□ -2.22
GAREM1-202ENST00000399218 MUC16Q8WXI7 14507 aa1.13□□□□□ -2.23
Retrieved 77 of 20,778 RNA–protein pairs in 58.8 ms