RNA–Protein interactions for RNA: ENST00000399075.6

C4orf3-201, Transcript of chromosome 4 open reading frame 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene C4orf3, Length 2,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C4orf3-201ENST00000399075 KRTAP9-6A0A140TA67 174 aa3.83□□□□□ -1.8
C4orf3-201ENST00000399075 FSIP2Q5CZC0 6907 aa3.76□□□□□ -1.81
C4orf3-201ENST00000399075 FCGBPQ9Y6R7 5405 aaPredicted RBP3.73□□□□□ -1.81
C4orf3-201ENST00000399075 MT1GP13640 62 aa3.72□□□□□ -1.81
C4orf3-201ENST00000399075 KRTAP19-3Q7Z4W3 81 aa3.72□□□□□ -1.81
C4orf3-201ENST00000399075 MT1MQ8N339 61 aa3.71□□□□□ -1.82
C4orf3-201ENST00000399075 KRTAP9-2Q9BYQ4 174 aa3.68□□□□□ -1.82
C4orf3-201ENST00000399075 KRTAP4-3Q9BYR4 195 aa3.67□□□□□ -1.82
C4orf3-201ENST00000399075 LOC100996750A0A140TA64 210 aa3.64□□□□□ -1.83
C4orf3-201ENST00000399075 KRTAP4-6Q9BYQ5 205 aa3.63□□□□□ -1.83
C4orf3-201ENST00000399075 LCE5AQ5TCM9 118 aa3.6□□□□□ -1.83
C4orf3-201ENST00000399075 MUC12Q9UKN1 5478 aa3.6□□□□□ -1.83
C4orf3-201ENST00000399075 GPR98Q8WXG9 6306 aa3.58□□□□□ -1.84
C4orf3-201ENST00000399075 SPRR2FQ96RM1 72 aa3.55□□□□□ -1.84
C4orf3-201ENST00000399075 CRCT1Q9UGL9 99 aa3.55□□□□□ -1.84
C4orf3-201ENST00000399075 KRTAP12-4P60329 112 aa3.54□□□□□ -1.84
C4orf3-201ENST00000399075 LCE1AQ5T7P2 110 aa3.48□□□□□ -1.85
C4orf3-201ENST00000399075 MACF1Q9UPN3 7388 aaKnown RBP3.48□□□□□ -1.85
C4orf3-201ENST00000399075 KRTAP2-2Q9BYT5 123 aa3.45□□□□□ -1.86
C4orf3-201ENST00000399075 KRTAP5-9P26371 169 aa3.43□□□□□ -1.86
C4orf3-201ENST00000399075 KRTAP6-3Q3LI67 103 aa3.42□□□□□ -1.86
C4orf3-201ENST00000399075 LCE1EQ5T753 118 aa3.41□□□□□ -1.86
C4orf3-201ENST00000399075 SYNE2Q8WXH0 6885 aaKnown RBP3.36□□□□□ -1.87
C4orf3-201ENST00000399075 MT1AP04731 61 aa3.36□□□□□ -1.87
C4orf3-201ENST00000399075 OBSCNQ5VST9 7968 aa3.35□□□□□ -1.87
C4orf3-201ENST00000399075 LCE3BQ5TA77 95 aa3.35□□□□□ -1.87
C4orf3-201ENST00000399075 SYNE1Q8NF91 8797 aaKnown RBP3.34□□□□□ -1.88
C4orf3-201ENST00000399075 KRTAP6-1Q3LI64 71 aa3.33□□□□□ -1.88
C4orf3-201ENST00000399075 MDN1Q9NU22 5596 aa3.32□□□□□ -1.88
C4orf3-201ENST00000399075 KRTAP5-5Q701N2 237 aaPredicted RBP3.31□□□□□ -1.88
C4orf3-201ENST00000399075 DSTQ03001 7570 aaKnown RBP3.31□□□□□ -1.88
C4orf3-201ENST00000399075 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.3□□□□□ -1.88
C4orf3-201ENST00000399075 SPRR2EP22531 72 aa3.25□□□□□ -1.89
C4orf3-201ENST00000399075 SPRR2BP35325 72 aa3.25□□□□□ -1.89
C4orf3-201ENST00000399075 SPRR2AP35326 72 aa3.25□□□□□ -1.89
C4orf3-201ENST00000399075 KRTAP4-9Q9BYQ8 210 aa3.24□□□□□ -1.89
C4orf3-201ENST00000399075 PRM1P04553 51 aa3.24□□□□□ -1.89
C4orf3-201ENST00000399075 KRTAP9-7A8MTY7 169 aa3.24□□□□□ -1.89
C4orf3-201ENST00000399075 LCE1DQ5T752 114 aa3.23□□□□□ -1.89
C4orf3-201ENST00000399075 LCE3DQ9BYE3 92 aa3.2□□□□□ -1.9
C4orf3-201ENST00000399075 MUC5BQ9HC84 5762 aaPredicted RBP3.19□□□□□ -1.9
C4orf3-201ENST00000399075 LCE3EQ5T5B0 92 aa3.16□□□□□ -1.9
C4orf3-201ENST00000399075 KRTAP9-4Q9BYQ2 154 aa3.15□□□□□ -1.91
C4orf3-201ENST00000399075 SPRR2DP22532 72 aa3.12□□□□□ -1.91
C4orf3-201ENST00000399075 LCE1FQ5T754 118 aa3.03□□□□□ -1.92
C4orf3-201ENST00000399075 NEBP20929 6669 aa3.01□□□□□ -1.93
C4orf3-201ENST00000399075 MT3P25713 68 aa3.01□□□□□ -1.93
C4orf3-201ENST00000399075 KRTAP6-2Q3LI66 62 aa2.99□□□□□ -1.93
C4orf3-201ENST00000399075 KRTAP5-3Q6L8H2 238 aa2.99□□□□□ -1.93
C4orf3-201ENST00000399075 KRTAP5-4Q6L8H1 288 aa2.94□□□□□ -1.94
C4orf3-201ENST00000399075 MUC19Q7Z5P9 8384 aa2.92□□□□□ -1.94
C4orf3-201ENST00000399075 KRTAP20-1Q3LI63 56 aa2.91□□□□□ -1.94
C4orf3-201ENST00000399075 AHNAKQ09666 5890 aaKnown RBP2.89□□□□□ -1.95
C4orf3-201ENST00000399075 KRTAP5-7Q6L8G8 165 aa2.87□□□□□ -1.95
C4orf3-201ENST00000399075 KRTAP4-12Q9BQ66 201 aa2.85□□□□□ -1.95
C4orf3-201ENST00000399075 KRTAP9-9Q9BYP9 154 aa2.8□□□□□ -1.96
C4orf3-201ENST00000399075 LCE4AQ5TA78 99 aa2.78□□□□□ -1.96
C4orf3-201ENST00000399075 KRTAP5-2Q701N4 177 aa2.75□□□□□ -1.97
C4orf3-201ENST00000399075 KRTAP4-2Q9BYR5 136 aa2.73□□□□□ -1.97
C4orf3-201ENST00000399075 KRTAP20-2Q3LI61 65 aa2.73□□□□□ -1.97
C4orf3-201ENST00000399075 MT4P47944 62 aa2.7□□□□□ -1.98
C4orf3-201ENST00000399075 HMCN1Q96RW7 5635 aa2.65□□□□□ -1.99
C4orf3-201ENST00000399075 MUC5ACP98088 5654 aa2.5□□□□□ -2.01
C4orf3-201ENST00000399075 KRTAP4-11Q9BYQ6 195 aa2.47□□□□□ -2.01
C4orf3-201ENST00000399075 KRTAP5-10Q6L8G5 202 aa2.44□□□□□ -2.02
C4orf3-201ENST00000399075 AHNAK2Q8IVF2 5795 aa2.42□□□□□ -2.02
C4orf3-201ENST00000399075 KRTAP5-1Q6L8H4 278 aa2.37□□□□□ -2.03
C4orf3-201ENST00000399075 LCE1BQ5T7P3 118 aa2.36□□□□□ -2.03
C4orf3-201ENST00000399075 LCE1CQ5T751 118 aa2.35□□□□□ -2.03
C4orf3-201ENST00000399075 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.25□□□□□ -2.05
C4orf3-201ENST00000399075 KRTAP5-8O75690 187 aa2.22□□□□□ -2.05
C4orf3-201ENST00000399075 KRTAP21-2Q3LI59 83 aa2.17□□□□□ -2.06
C4orf3-201ENST00000399075 KRTAP5-11Q6L8G4 156 aa2.04□□□□□ -2.08
C4orf3-201ENST00000399075 KRTAP21-1Q3LI58 79 aa1.96□□□□□ -2.1
C4orf3-201ENST00000399075 KRTAP4-4Q9BYR3 166 aa1.9□□□□□ -2.11
C4orf3-201ENST00000399075 PHGR1C9JFL3 82 aa1.74□□□□□ -2.13
C4orf3-201ENST00000399075 MUC16Q8WXI7 14507 aa1.17□□□□□ -2.22
Retrieved 77 of 20,778 RNA–protein pairs in 125.1 ms