RNA–Protein interactions for RNA: ENST00000399017.6

TTC3-204, Transcript of tetratricopeptide repeat domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TTC3, Length 10,363 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-204ENST00000399017 MT1BP07438 61 aa1.62□□□□□ -2.15
TTC3-204ENST00000399017 DNAH5Q8TE73 4624 aa1.62□□□□□ -2.15
TTC3-204ENST00000399017 KRTAP9-9Q9BYP9 154 aa1.62□□□□□ -2.15
TTC3-204ENST00000399017 KRTAP4-7Q9BYR0 210 aa1.62□□□□□ -2.15
TTC3-204ENST00000399017 KMT2CQ8NEZ4 4911 aaKnown RBP1.61□□□□□ -2.15
TTC3-204ENST00000399017 KRTAP9-8Q9BYQ0 159 aa1.61□□□□□ -2.15
TTC3-204ENST00000399017 MT1XP80297 61 aa1.6□□□□□ -2.15
TTC3-204ENST00000399017 LRP1Q07954 4544 aaKnown RBP1.59□□□□□ -2.15
TTC3-204ENST00000399017 LCE4AQ5TA78 99 aa1.59□□□□□ -2.16
TTC3-204ENST00000399017 DYNC1H1Q14204 4646 aaKnown RBP1.58□□□□□ -2.16
TTC3-204ENST00000399017 MT1MQ8N339 61 aa1.58□□□□□ -2.16
TTC3-204ENST00000399017 KRTAP2-2Q9BYT5 123 aa1.57□□□□□ -2.16
TTC3-204ENST00000399017 KRTAP2-1Q9BYU5 128 aa1.57□□□□□ -2.16
TTC3-204ENST00000399017 KRTAP4-9Q9BYQ8 210 aa1.56□□□□□ -2.16
TTC3-204ENST00000399017 SYNE1Q8NF91 8797 aaKnown RBP1.55□□□□□ -2.16
TTC3-204ENST00000399017 LOC100996750A0A140TA64 210 aa1.55□□□□□ -2.16
TTC3-204ENST00000399017 MT1EP04732 61 aa1.54□□□□□ -2.16
TTC3-204ENST00000399017 MYCBP2O75592 4640 aa1.54□□□□□ -2.16
TTC3-204ENST00000399017 KRTAP9-3Q9BYQ3 159 aa1.54□□□□□ -2.16
TTC3-204ENST00000399017 MUC2Q02817 5179 aa1.53□□□□□ -2.16
TTC3-204ENST00000399017 KRTAP9-1A8MXZ3 250 aaPredicted RBP1.53□□□□□ -2.16
TTC3-204ENST00000399017 LPAP08519 4548 aa1.53□□□□□ -2.17
TTC3-204ENST00000399017 KRTAP6-3Q3LI67 103 aa1.52□□□□□ -2.17
TTC3-204ENST00000399017 KRTAP4-8A0A0G2JLE6 195 aa1.52□□□□□ -2.17
TTC3-204ENST00000399017 KRTAP4-8Q9BYQ9 185 aa1.52□□□□□ -2.17
TTC3-204ENST00000399017 USH2AO75445 5202 aa1.5□□□□□ -2.17
TTC3-204ENST00000399017 MACF1Q9UPN3 7388 aaKnown RBP1.49□□□□□ -2.17
TTC3-204ENST00000399017 HERC1Q15751 4861 aa1.49□□□□□ -2.17
TTC3-204ENST00000399017 FAT4Q6V0I7 4981 aa1.48□□□□□ -2.17
TTC3-204ENST00000399017 HERC2O95714 4834 aa1.48□□□□□ -2.17
TTC3-204ENST00000399017 SSPOA2VEC9 5147 aa1.47□□□□□ -2.17
TTC3-204ENST00000399017 KMT2DO14686 5537 aa1.46□□□□□ -2.18
TTC3-204ENST00000399017 LRP2P98164 4655 aa1.45□□□□□ -2.18
TTC3-204ENST00000399017 BIRC6Q9NR09 4857 aa1.44□□□□□ -2.18
TTC3-204ENST00000399017 PRM1P04553 51 aa1.44□□□□□ -2.18
TTC3-204ENST00000399017 MUC17Q685J3 4493 aa1.44□□□□□ -2.18
TTC3-204ENST00000399017 KRTAP4-2Q9BYR5 136 aa1.43□□□□□ -2.18
TTC3-204ENST00000399017 DSTQ03001 7570 aaKnown RBP1.4□□□□□ -2.18
TTC3-204ENST00000399017 MT1AP04731 61 aa1.39□□□□□ -2.19
TTC3-204ENST00000399017 KRTAP19-7Q3SYF9 63 aa1.37□□□□□ -2.19
TTC3-204ENST00000399017 KRTAP20-2Q3LI61 65 aa1.36□□□□□ -2.19
TTC3-204ENST00000399017 KRTAP4-6Q9BYQ5 205 aa1.35□□□□□ -2.19
TTC3-204ENST00000399017 KRTAP9-4Q9BYQ2 154 aa1.33□□□□□ -2.2
TTC3-204ENST00000399017 KRTAP6-2Q3LI66 62 aa1.31□□□□□ -2.2
TTC3-204ENST00000399017 KRTAP19-2Q3LHN2 52 aa1.29□□□□□ -2.2
TTC3-204ENST00000399017 MUC5BQ9HC84 5762 aaPredicted RBP1.28□□□□□ -2.2
TTC3-204ENST00000399017 KRTAP4-3Q9BYR4 195 aa1.23□□□□□ -2.21
TTC3-204ENST00000399017 MDN1Q9NU22 5596 aa1.2□□□□□ -2.22
TTC3-204ENST00000399017 MUC19Q7Z5P9 8384 aa1.2□□□□□ -2.22
TTC3-204ENST00000399017 KRTAP9-6A8MVA2 160 aa1.2□□□□□ -2.22
TTC3-204ENST00000399017 KRTAP6-1Q3LI64 71 aa1.19□□□□□ -2.22
TTC3-204ENST00000399017 KRTAP4-11Q9BYQ6 195 aa1.18□□□□□ -2.22
TTC3-204ENST00000399017 FCGBPQ9Y6R7 5405 aaPredicted RBP1.17□□□□□ -2.22
TTC3-204ENST00000399017 KRTAP4-12Q9BQ66 201 aa1.15□□□□□ -2.22
TTC3-204ENST00000399017 KRTAP5-9P26371 169 aa1.15□□□□□ -2.23
TTC3-204ENST00000399017 NEBP20929 6669 aa1.15□□□□□ -2.23
TTC3-204ENST00000399017 PHGR1C9JFL3 82 aa1.14□□□□□ -2.23
TTC3-204ENST00000399017 KRTAP4-4Q9BYR3 166 aa1.12□□□□□ -2.23
TTC3-204ENST00000399017 KRTAP5-4Q6L8H1 288 aa1.08□□□□□ -2.24
TTC3-204ENST00000399017 HMCN1Q96RW7 5635 aa1.07□□□□□ -2.24
TTC3-204ENST00000399017 MUC12Q9UKN1 5478 aa1.07□□□□□ -2.24
TTC3-204ENST00000399017 KRTAP5-5Q701N2 237 aaPredicted RBP1.05□□□□□ -2.24
TTC3-204ENST00000399017 KRTAP5-3Q6L8H2 238 aa1□□□□□ -2.25
TTC3-204ENST00000399017 GPR98Q8WXG9 6306 aa0.99□□□□□ -2.25
TTC3-204ENST00000399017 AHNAKQ09666 5890 aaKnown RBP0.98□□□□□ -2.25
TTC3-204ENST00000399017 AHNAK2Q8IVF2 5795 aa0.95□□□□□ -2.26
TTC3-204ENST00000399017 KRTAP5-7Q6L8G8 165 aa0.93□□□□□ -2.26
TTC3-204ENST00000399017 MUC5ACP98088 5654 aa0.93□□□□□ -2.26
TTC3-204ENST00000399017 KRTAP5-8O75690 187 aa0.9□□□□□ -2.27
TTC3-204ENST00000399017 KRTAP5-2Q701N4 177 aa0.88□□□□□ -2.27
TTC3-204ENST00000399017 KRTAP5-6Q6L8G9 129 aaPredicted RBP0.87□□□□□ -2.27
TTC3-204ENST00000399017 KRTAP5-1Q6L8H4 278 aa0.84□□□□□ -2.28
TTC3-204ENST00000399017 KRTAP21-1Q3LI58 79 aa0.78□□□□□ -2.29
TTC3-204ENST00000399017 KRTAP5-10Q6L8G5 202 aa0.77□□□□□ -2.29
TTC3-204ENST00000399017 KRTAP5-11Q6L8G4 156 aa0.73□□□□□ -2.29
TTC3-204ENST00000399017 MUC16Q8WXI7 14507 aa0.72□□□□□ -2.29
TTC3-204ENST00000399017 KRTAP21-2Q3LI59 83 aa0.65□□□□□ -2.31
Retrieved 77 of 20,778 RNA–protein pairs in 80.7 ms